23S rRNA Haloarcula marismortuiComparative/Crystal Structure Base Triple Frequencies (1/13)
| Triple (32:451)456 |
|---|
| Aln |
AUG |
GCA |
GCG |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
1.3 |
1.3 |
*90.3 |
5.6 |
1.6 |
12 |
-- |
-- |
1.58/1.49/1.50 |
698 |
| 3 |
0.2 |
0.2 |
98.5 |
0.7 |
0.2 |
4 |
-- |
-- |
1.90/1.97/1.94 |
403 |
| B |
-- |
0.4 |
99.6 |
-- |
-- |
2 |
-- |
-- |
2.00/2.00/1.97 |
252 |
| A |
-- |
-- |
100.0 |
-- |
-- |
1 |
-- |
-- |
2.00/2.00/2.00 |
36 |
| C |
2.2 |
-- |
97.8 |
-- |
-- |
2 |
-- |
-- |
1.85/1.92/2.00 |
46 |
| E |
0.9 |
-- |
95.7 |
2.6 |
0.9 |
3 |
-- |
-- |
1.71/1.93/1.92 |
116 |
| M |
2.8 |
3.2 |
*75.5 |
14.5 |
4.0 |
12 |
0.90 |
-- |
1.12/0.68/0.73 |
249 |
| Triple (33:450)1352 |
|---|
| Aln |
AUG |
AUU |
CGA |
CGG |
GCA |
GCG |
GCU |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
2.0 |
*1.2 |
*1.5 |
24.7 |
3.5 |
*56.3 |
1.1 |
6.6 |
2.9 |
20 |
0.63 |
-- |
0.68/0.70/1.27 |
648 |
| 3 |
2.0 |
-- |
-- |
1.1 |
6.6 |
86.3 |
1.7 |
1.1 |
1.1 |
7 |
-- |
-- |
1.68/1.78/1.53 |
351 |
| B |
2.9 |
-- |
-- |
1.4 |
1.9 |
92.8 |
-- |
-- |
1.0 |
5 |
-- |
-- |
1.66/1.71/1.87 |
208 |
| A |
-- |
-- |
-- |
-- |
50.0 |
36.1 |
13.9 |
-- |
-- |
3 |
-- |
-- |
2.00/2.00/0.59 |
36 |
| C |
2.2 |
-- |
-- |
-- |
-- |
97.8 |
-- |
-- |
-- |
2 |
-- |
-- |
1.85/1.92/2.00 |
46 |
| E |
0.9 |
-- |
-- |
0.9 |
0.9 |
90.7 |
0.9 |
3.7 |
1.9 |
6 |
-- |
-- |
1.71/1.85/1.71 |
108 |
| M |
2.0 |
*3.2 |
4.0 |
*62.2 |
-- |
6.8 |
0.4 |
15.5 |
6.0 |
17 |
0.78 |
-- |
0.57/0.20/0.75 |
251 |
| Triple (36:446)674 |
|---|
| Aln |
AUA |
AUU |
CGA |
CGC |
CGG |
CGU |
GCU |
UAA |
UAC |
UAU |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
1.4 |
4.1 |
*20.6 |
3.5 |
8.6 |
4.0 |
*5.0 |
5.9 |
*7.6 |
4.0 |
32.3 |
3.1 |
19 |
0.50 |
-- |
-0.20/-0.19/-0.64 |
734 |
| 3 |
1.0 |
7.1 |
*31.3 |
2.5 |
14.4 |
4.8 |
*9.3 |
5.1 |
*13.9 |
2.5 |
3.5 |
4.5 |
16 |
0.57 |
0.57 |
0.33/0.47/0.10 |
396 |
| B |
*1.6 |
10.8 |
11.6 |
1.2 |
*22.3 |
5.6 |
*14.7 |
2.4 |
*20.7 |
2.4 |
-- |
6.8 |
16 | 0.59 |
0.59 |
0.13/0.19/0.02 |
251 |
| A |
-- |
-- |
*77.8 |
-- |
-- |
2.8 |
-- |
11.1 |
*8.3 |
-- |
-- |
-- |
4 |
0.86 |
0.86 |
1.29/1.30/1.42 |
36 |
| C |
-- |
-- |
*33.8 |
20.8 |
7.8 |
11.7 |
-- |
16.9 |
1.3 |
*3.9 |
-- |
3.9 |
9 |
0.38 |
-- |
1.17/1.26/0.24 |
77 |
| E |
-- |
0.9 |
*60.9 |
6.4 |
0.9 |
3.6 |
0.9 |
9.1 |
-- |
*3.6 |
12.7 |
0.9 |
9 |
0.74 |
-- |
0.94/0.94/0.87 |
110 |
| M |
*2.3 |
0.8 |
0.4 |
-- |
-- |
0.4 |
-- |
3.8 |
-- |
*6.1 |
85.4 |
0.8 |
8 |
0.58 |
-- |
-0.48/-0.62/-0.50 |
261 |
| Triple (40:441)442 |
|---|
| Aln |
AAG |
AGG |
AUA |
AUC |
AUG |
AUU |
CGU |
GCG |
UAA |
UAG |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
0.8 | 1.5 |
13.2 |
*31.2 |
5.0 |
1.6 |
*2.3 |
*1.5 |
*1.2 |
1.2 |
34.5 |
5.9 |
32 |
0.55 |
-- |
-0.14/-0.22/-0.71 |
740 |
| 3 |
1.5 |
2.7 |
23.2 |
*38.9 |
9.1 |
1.2 |
*4.2 |
*2.7 |
*0.5 |
2.2 |
4.4 |
9.4 |
29 |
0.49 |
-- |
0.98/0.61/-0.05 |
406 |
| B |
-- |
-- |
35.2 |
62.4 |
-- |
2.0 |
-- |
-- |
-- |
-- |
0.4 |
-- |
3 |
-- |
-- |
1.96/1.93/0.90 |
250 |
| A |
-- |
-- |
-- |
*5.6 |
-- |
-- |
*47.2 |
-- |
-- |
-- |
27.8 |
19.4 |
6 |
0.73 |
-- |
0.99/0.75/-0.10 |
36 |
| C |
-- |
-- |
3.8 |
86.1 |
-- |
5.1 |
-- |
-- |
-- |
-- |
5.1 |
-- |
3 |
-- |
-- |
1.73/1.92/1.16 |
79 |
| E |
5.0 |
9.1 |
5.0 |
0.8 |
*30.6 |
-- |
-- |
9.1 |
1.7 |
7.4 |
5.8 |
25.6 |
23 |
0.37 |
-- |
0.61/0.00/0.66 |
121 |
| M |
-- |
-- |
0.4 |
*2.0 |
-- |
1.2 |
-- |
-- |
*2.7 |
-- |
91.4 |
2.4 |
9 |
0.59 |
0.59 |
-0.62/-0.62/-0.41 |
255 |
| Triple (41:440)151 |
|---|
| Aln |
AUA |
AUU |
GCA |
GCC |
GCG |
GCU |
UCG |
UCU |
UGC |
UUU |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
5.2 |
1.2 |
*30.8 |
6.7 |
5.1 |
2.7 |
1.3 |
1.2 |
1.2 |
*4.4 |
32.5 |
7.5 |
29 |
0.52 |
-- |
-0.30/-0.28/-0.62 |
744 |
| 3 |
2.9 |
1.7 |
*40.4 |
11.7 |
9.2 |
4.4 |
2.4 |
2.2 |
1.7 |
*7.8 |
6.3 |
9.2 |
27 |
0.51 |
-- |
0.76/0.52/0.06 |
411 |
| B |
2.4 |
-- |
54.0 |
19.2 |
15.2 |
7.2 |
-- |
-- |
-- |
-- |
1.6 |
0.4 |
6 |
-- |
-- |
1.80/1.82/0.24 |
250 |
| A |
13.9 |
-- |
86.1 |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
2 |
-- |
-- |
1.42/1.43/2.00 |
36 |
| C |
13.9 |
-- |
78.5 |
2.5 |
-- |
2.5 |
-- |
-- |
-- |
-- |
-- |
2.5 |
5 |
-- |
-- |
1.42/1.39/1.72 |
79 |
| E |
0.8 |
5.6 |
0.8 |
-- |
-- |
-- |
7.9 |
7.1 |
5.6 |
*25.4 |
17.5 |
29.4 |
23 |
0.34 |
-- |
0.38/-0.23/0.42 |
126 |
| M |
*6.3 |
0.8 |
0.4 |
-- |
-- |
-- |
-- |
-- |
0.8 |
0.4 |
85.0 |
6.3 |
11 |
0.47 |
-- |
-0.57/-0.59/-0.50 |
254 |
| Triple (41:440)152 |
|---|
| Aln |
ACA |
AUA |
GCA |
GUA |
UAA |
UCA |
UGA |
UUA |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
1.3 |
6.7 |
*45.7 |
1.5 |
2.2 |
3.1 |
1.3 |
4.8 |
32.0 |
1.3 |
15 |
0.01 |
-- |
-0.30/-0.28/0.60 |
744 |
| 3 |
2.2 |
5.6 |
66.4 |
2.2 |
1.0 |
5.4 |
1.9 |
8.5 |
5.4 |
1.5 |
13 |
-- |
-- |
0.76/0.52/1.92 |
411 |
| B |
-- |
2.4 |
96.8 |
-- |
-- |
-- |
-- |
-- |
-- |
0.8 |
4 |
-- |
-- |
1.80/1.82/1.97 |
250 |
| A |
-- |
13.9 |
86.1 |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
2 |
-- |
-- |
1.42/1.43/2.00 |
36 |
| C |
-- |
13.9 |
83.5 |
2.5 |
-- |
-- |
-- |
-- |
-- |
-- |
3 |
-- |
-- |
1.42/1.39/2.00 |
79 |
| E |
7.1 |
9.5 |
0.8 |
7.1 |
3.2 |
17.5 |
6.3 |
*27.8 |
17.5 |
3.2 |
12 |
0.35 |
-- |
0.38/-0.23/1.85 |
126 |
| M |
0.4 |
*6.3 |
0.4 |
-- |
4.7 |
0.4 |
0.8 |
0.4 |
85.0 |
1.6 |
10 |
0.45 |
-- |
-0.57/-0.59/-0.38 |
254 |
| Triple (43:148)48 |
|---|
| Aln |
AUA |
CGA |
UAA |
UGA |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
0.4 |
*64.0 |
0.7 |
1.3 |
33.1 |
0.6 |
8 |
-- |
-- |
0.15/0.35/0.39 |
713 |
| 3 |
0.5 |
95.2 |
1.0 |
2.2 |
0.5 |
0.5 |
6 |
-- |
-- |
1.72/1.79/1.92 |
400 |
| B |
-- |
98.0 |
-- |
1.2 |
-- |
0.8 |
4 |
-- |
-- |
1.91/1.97/1.93 |
250 |
| A |
5.6 |
69.4 |
8.3 |
16.7 |
-- |
-- |
4 |
-- |
-- |
0.90/1.28/2.00 |
36 |
| C |
-- |
94.9 |
1.3 |
-- |
2.5 |
1.3 |
3 |
-- |
-- |
1.80/1.54/2.00 |
79 |
| E |
-- |
97.4 |
0.9 |
-- |
1.7 |
-- |
2 |
-- |
-- |
1.84/1.72/1.91 |
115 |
| M |
0.4 |
-- |
-- |
-- |
99.1 |
0.4 |
2 |
-- |
-- |
-0.51/-0.25/-0.26 |
234 |
| Triple (45:115)44 |
|---|
| Aln |
ACG |
AUG |
UCG |
gap |
Other |
N |
CovT1 |
CovT2 |
Conservation |
Seq |
|---|
| T |
12.1 |
53.1 |
1.3 |
31.9 |
1.7 |
12 |
-- |
-- |
0.32/-0.07/ 0.34 |
718 |
| 3 |
21.2 |
74.8 |
2.2 |
0.7 |
1.0 |
7 |
-- |
-- |
1.79/ 1.15/ 1.92 |
405 |
| B |
-- |
98.4 |
-- |
0.4 |
1.2 |
4 |
-- |
-- |
1.96/ 1.96/ 1.92 |
251 |
| A |
-- |
100.0 |
-- |
-- |
-- |
1 |
-- |
-- |
2.00/ 2.00/ 2.00 |
36 |
| C |
-- |
98.7 |
-- |
-- |
1.3 |
2 |
-- |
-- |
2.00/ 1.92/ 1.90 |
79 |
| E |
72.3 |
17.6 |
7.6 |
1.7 |
0.8 |
4 |
-- |
-- |
1.53/ 1.17/ 1.91 |
119 |
| M |
0.4 |
-- |
-- |
96.6 |
3.0 |
6 |
0.50 |
-- |
-0.33/-0.48/-0.43 |
234 |
| Triple (51:110)121 |
|---|
| Aln |
AUA |
AUC |
AUU |
GCA |
GCC |
GCU |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
0.7 |
1.7 |
*9.4 |
*51.2 |
1.1 |
3.9 |
30.9 |
1.2 |
12 |
0.88 |
0.88 |
0.09/0.06/-0.16 |
727 |
| 3 |
1.0 |
2.9 |
*16.5 |
*65.1 |
2.0 |
6.6 |
4.2 |
1.7 |
11 |
0.85 |
0.85 |
1.20/1.16/0.59 |
407 |
| B |
-- |
-- |
-- |
99.2 |
-- |
-- |
0.4 |
0.4 |
2 |
-- |
-- |
2.00/1.96/1.96 |
253 |
| A |
-- |
-- |
-- |
25.0 |
11.1 |
58.3 |
5.6 |
-- |
3 |
-- |
-- |
2.00/2.00/0.35 |
36 |
| C |
-- |
-- |
-- |
97.7 |
-- |
1.2 |
1.2 |
-- |
2 |
-- |
-- |
2.00/2.00/1.82 |
86 |
| E |
3.4 |
10.1 |
*56.3 |
*5.0 |
3.4 |
5.0 |
11.8 |
5.0 |
10 |
0.70 |
-- |
1.04/1.03/0.19 |
119 |
| M |
0.4 |
-- |
*0.4 |
*9.8 |
-- |
-- |
88.5 |
0.9 |
5 |
0.89 |
-- |
-0.50/-0.49/-0.37 |
234 |
| Triple (53:66)67 |
|---|
| Aln |
CGA |
CGC |
UAG |
UAU |
UGA |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T
| *63.5 |
0.8 |
*3.6 |
0.8 |
0.4 |
27.6 |
3.3 |
14 |
0.93 |
0.93 |
0.22/0.25/0.20 |
728 |
| 3
| *88.5 |
1.2 |
*6.4 |
1.5 |
0.2 |
0.7 |
1.5 |
6 |
0.96 |
0.96 |
1.57/1.53/1.33 |
408 |
| B
| *85.0 |
-- |
*10.3 |
2.4 |
0.4 |
-- |
2.0 |
5 |
0.95 |
0.95 |
1.44/1.46/1.28 |
253 |
| A
| 100.0 |
-- |
-- |
-- |
-- |
-- |
-- |
1 |
-- |
-- |
2.00/2.00/2.00 |
36 |
| C
| 96.6 |
-- |
-- |
-- |
2.3 |
-- |
1.1 |
3 |
-- |
-- |
1.84/2.00/1.92 |
87 |
| E
| 92.5 |
4.2 |
-- |
-- |
-- |
2.5 |
0.8 |
3 |
-- |
-- |
1.91/1.78/1.53 |
120 |
| M
| *7.3 |
0.4 |
-- |
-- |
-- |
85.0 |
7.3 |
10 |
0.60 |
-- |
-0.57/-0.58/-0.47 |
233 |
| Triple (54:65)69 |
|---|
| Aln |
GCA |
GCU |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
*69.9 |
0.5 |
26.7 |
2.9 |
12 |
0.96 |
-- |
0.47/0.47/0.51 |
735 |
| 3 |
97.3 |
1.0 |
0.5 |
1.2 |
6 |
-- |
-- |
1.93/1.84/1.84 |
408 |
| B |
100.0 |
-- |
-- |
-- |
1 |
-- |
-- |
2.00/2.00/2.00 |
253 |
| A |
100.0 |
-- |
-- |
-- |
1 |
-- |
-- |
2.00/2.00/2.00 |
36 |
| C |
98.9 |
-- |
-- |
1.1 |
2 |
-- |
-- |
2.00/2.00/1.92 |
94 |
| E |
90.8 |
3.3 |
1.7 |
4.2 |
6 |
-- |
-- |
1.81/1.57/1.56 |
120 |
| M |
*10.3 |
-- |
83.3 |
6.4 |
9 |
0.69 |
-- |
-0.54/-0.51/-0.44 |
233 |
| Triple (60:86)59 |
|---|
| Aln |
AAA |
AAG |
AAU |
ACU |
AUA |
AUU |
CGA |
GCA |
gap |
Other |
N |
CovT1 |
CovT2 |
Conservation |
Seq |
|---|
| T |
*13.0 |
3.0 |
6.7 |
4.3 |
5.8 |
7.5 |
3.0 |
7.5 |
44.6 |
4.6 |
29 |
0.01 |
-- |
-0.16/-0.86/-0.56 |
744 |
| 3 |
*14.5 |
5.3 | 8.7 |
-- |
9.9 |
12.3 |
5.1 |
13.5 |
28.7 |
1.9 |
13 |
0.21 |
-- |
0.89/-0.72/ 0.43 |
414 |
| B |
9.3 |
8.5 |
14.0 |
-- |
15.9 |
*19.8 |
8.1 |
*21.7 |
-- |
2.7 |
12 |
0.41 |
-- |
0.76/ 0.15/ 0.67 |
258 |
| A |
100.0 |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
1 |
-- |
-- |
2.00/ 2.00/ 2.00 |
36 |
| C |
*38.5 |
-- |
14.6 |
33.3 |
-- |
5.2 |
-- |
-- |
3.1 |
5.2 |
9 |
0.41 |
-- |
1.57/ 0.66/ 0.86 |
96 |
| E |
-- |
-- |
-- |
-- |
*0.8 |
-- |
-- |
-- |
98.3 |
0.8 |
2 |
1.00 |
1.00 |
1.05/-0.10/ 0.54 |
121 |
| M |
-- |
-- |
-- |
-- |
0.9 |
-- |
0.4 |
-- |
89.7 |
9.0 |
15 |
0.25 |
-- |
-0.57/-0.50/-0.62 |
234 |
| Triple (61:85)59 |
|---|
| Aln |
AUA |
AUG |
AUU |
CGA |
CGU |
GAA |
GCA |
GUA |
UAA |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
| T |
2.0 |
*3.1 |
3.9 |
9.1 |
*14.9 |
1.3 |
*9.9 |
2.8 |
5.0 |
45.2 |
2.7 |
22 |
0.51 |
-- |
-0.75/-0.90/-0.56 |
744 |
| 3 |
2.9 |
*5.3 |
6.8 |
10.1 |
*14.5 |
-- |
*17.6 |
5.1 |
7.2 |
28.7 |
1.7 |
13 |
0.52 |
0.52 |
0.13/-0.78/0.43 |
414 |
| B |
4.7 |
*8.5 |
10.9 |
16.3 |
*23.3 |
-- |
*14.3 |
8.1 |
11.6 |
-- |
2.3 |
12 |
0.46 |
-- |
0.11/0.17/0.67 |
258 |
| A |
-- |
-- |
-- |
-- |
-- |
-- |
100.0 |
-- |
-- |
-- |
-- |
1 |
-- |
-- |
2.00/2.00/2.00 |
36 |
| C |
2.1 |
-- |
-- |
26.0 |
*53.1 |
*8.3 |
-- |
-- |
6.2 |
1.0 |
3.1 |
8 |
0.62 |
-- |
0.98/1.20/0.86 |
96 |
| E |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
0.8 |
98.3 |
0.8 |
2 |
-- |
-- |
1.22/-0.10/0.54 |
121 |
| M |
0.4 |
0.4 |
0.4 |
*0.4 |
-- |
0.9 |
0.4 |
-- |
0.4 |
92.3 |
4.3 |
12 |
0.33 |
-- |
-0.49/-0.46/-0.62 |
234 |
| Triple (62:84)56 |
|---|
| Aln |
AGU |
CGA |
CGC |
CGG |
CGU |
UAG |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
0.7 |
10.5 |
0.4 |
*36.9 |
0.9 |
0.5 |
45.8 |
4.2 |
22 |
0.71 |
-- |
-0.29/-0.15/-0.33 |
740 |
| 3 |
-- |
5.3 |
0.2 |
*60.0 |
1.5 |
0.5 |
29.4 |
3.2 |
11 |
0.86 |
-- |
0.75/0.43/0.88 |
412 |
| B |
-- |
8.6 |
0.4 |
*83.5 |
2.4 |
-- |
0.4 |
4.7 |
9 |
0.85 |
-- |
1.63/1.86/1.22 |
255 |
| A |
-- |
-- |
-- |
94.4 |
-- |
5.6 |
-- |
-- |
2 |
-- |
-- |
1.69/1.69/2.00 |
36 |
| C |
-- |
*59.6 |
2.1 |
27.7 |
1.1 |
*2.1 |
3.2 |
4.3 |
8 |
0.64 |
-- |
1.66/1.51/0.67 |
94 |
| E |
-- |
-- |
-- |
0.8 |
-- |
-- |
98.4 |
0.8 |
2 |
-- |
-- |
0.25/-0.10/1.30 |
122 |
| M |
*2.1 |
-- |
-- |
-- |
-- |
-- |
91.9 |
6.0 |
11 |
0.37 |
-- |
-0.48/-0.47/-0.62 |
234 |
| Triple (71:106)107 |
|---|
| Aln |
AAU |
ACA |
GAA |
GAC |
GAU |
GGU |
UAU |
UCA |
UGU |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
0.7 |
0.7 |
1.7 |
1.1 |
*48.9 |
6.0 |
0.7 |
*1.1 |
6.3 |
29.1 |
3.8 |
28 |
0.71 |
-- |
-0.06/-0.16/0.19 |
746 |
| 3 |
-- |
1.2 |
2.7 |
1.9 |
*65.2 |
9.4 |
0.7 |
*1.9 |
11.1 |
2.2 |
3.6 |
20 |
0.69 |
-- |
1.01/0.86/1.37 |
414 |
| B |
-- |
-- |
0.4 |
-- |
73.4 |
11.2 |
-- |
-- |
14.7 |
-- |
0.4 |
5 |
-- |
-- |
1.36/1.18/1.96 |
259 |
| A |
-- |
-- |
-- |
-- |
91.7 |
8.3 |
-- |
-- |
-- |
-- |
-- |
2 |
-- |
-- |
2.00/1.59/2.00 |
36 |
| C |
5.1 |
-- |
1.0 |
-- |
86.7 |
5.1 |
-- |
-- |
-- |
1.0 |
1.0 |
5 |
-- |
-- |
1.53/1.67/1.92 |
98 |
| E |
-- |
4.2 |
8.3 |
6.7 |
*40.0 |
5.8 |
2.5 |
*6.7 |
6.7 |
7.5 |
11.7 |
19 |
0.50 |
-- |
0.35/0.41/0.57 |
120 |
| M |
-- |
-- |
0.4 |
-- |
*4.3 |
0.4 |
0.9 |
-- |
0.4 |
88.5 |
5.1 |
14 |
0.44 |
-- |
-0.62/-0.46/-0.42 |
234 |
| Triple (133:145)141 |
|---|
| Aln |
AUA |
CGA |
GCA |
GCC |
GCG |
GCU |
GUU |
UAA |
UAC |
UAU |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
1.6 |
20.8 |
2.6 |
1.2 |
2.6 |
1.4 |
*3.0 |
*21.6 |
1.3 |
1.2 |
37.7 |
4.8 |
25 |
0.40 |
-- |
-0.69/-0.76/-0.45 |
763 |
| 3 |
1.6 |
*36.7 |
4.7 |
2.1 |
4.7 |
2.6 |
*5.3 |
17.4 |
*2.3 |
2.1 |
14.7 |
5.8 |
22 |
0.52 |
-- |
0.09/-0.03/-0.02 |
430 |
| B |
0.7 |
*57.2 |
3.7 |
-- |
-- |
-- |
-- |
25.5 |
-- |
*0.7 |
10.0 |
2.2 |
8 |
0.64 |
-- |
0.76/0.82/1.26 |
271 |
| A |
-- |
*5.6 |
-- |
-- |
-- |
-- |
-- |
13.9 |
*27.8 |
13.9 |
38.9 |
-- |
4 |
0.55 |
-- |
0.96/0.96/-0.68 |
36 |
| C |
1.0 |
1.0 |
-- |
-- |
-- |
-- |
-- |
*90.9 |
-- |
-- |
3.0 |
4.0 |
6 |
0.96 |
-- |
1.59/1.68/1.52 |
99 |
| E |
4.0 |
*1.6 |
8.1 |
7.3 |
16.1 |
8.9 |
*18.5 |
0.8 |
-- |
1.6 |
17.7 |
15.3 |
19 |
0.28 |
-- |
0.16/0.08/-0.54 |
124 |
| M |
*1.7 |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
94.9 |
3.4 |
5 |
0.75 |
0.75 |
-0.30/-0.29/-0.27 |
234 |
| Triple (134:144)130 |
|---|
| Aln |
AUA |
AUC |
AUG |
CGA |
CGC |
CGG |
CGU |
GCA |
UAA |
UAU |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
*6.0 |
2.2 |
2.6 |
3.9 |
4.1 |
*8.9 |
8.0 |
4.3 |
4.2 |
*2.9 |
36.5 |
16.2 |
42 |
0.28 |
-- |
-0.82/-0.72/-0.89 |
761 |
| 3 |
*7.7 |
4.0 |
4.2 |
5.6 |
7.0 |
*15.7 |
13.6 |
5.4 |
2.8 |
*2.6 |
9.6 |
22.0 |
35 |
0.29 |
-- |
-0.06/0.14/-0.39 |
428 |
| B |
*12.2 |
6.3 |
6.6 |
6.3 |
4.8 |
*20.7 |
5.2 |
8.5 |
4.1 |
*4.1 |
5.9 |
15.5 |
25 |
0.39 |
-- |
0.01/0.11/-0.08 |
271 |
| A |
-- |
-- |
-- |
11.1 |
2.8 |
19.4 |
*38.9 |
-- |
2.8 |
-- |
8.3 |
16.7 |
7 |
0.55 |
-- |
1.29/1.29/-0.29 |
36 |
| C |
13.1 |
-- |
1.0 |
6.1 |
*1.0 |
1.0 |
3.0 |
10.1 |
*20.2 |
11.1 |
5.1 |
28.3 |
23 |
0.30 |
-- |
0.12/0.13/0.41 |
99 |
| E |
-- |
-- |
0.8 |
2.5 |
13.1 |
3.3 |
*24.6 |
-- |
-- |
-- |
18.0 |
37.7 |
19 |
0.35 |
-- |
0.15/0.50/-0.43 |
122 |
| M |
-- |
-- |
0.4 |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
99.1 |
0.4 |
2 |
-- |
-- |
-0.28/-0.27/-0.16 |
234 |
| Triple (134:144)141 |
|---|
| Aln |
AAA |
AUA |
CGA |
CGG |
CGU |
GCA |
GUA |
UAA |
UAC |
UGG |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
1.7 |
12.3 |
*15.3 |
1.6 |
5.1 |
5.8 |
2.4 |
7.2 |
*1.0 |
1.2 |
38.0 |
8.4 |
34 |
0.27 |
-- |
-0.82/-0.72/-0.45 |
763 |
| 3 |
0.5 |
17.0 |
*24.7 |
2.8 |
7.9 |
7.2 |
4.0 |
5.6 |
*1.9 |
2.1 |
14.9 |
11.6 |
27 |
0.32 |
-- |
-0.06/0.14/-0.02 |
430 |
| B |
0.7 |
26.9 |
*31.7 |
-- |
0.7 |
11.4 |
6.3 |
7.7 |
-- |
-- |
10.0 |
4.4 |
13 |
-- |
-- |
0.01/0.11/1.26 |
271 |
| A |
-- |
-- |
*19.4 |
-- |
13.9 |
-- |
-- |
-- |
*19.4 |
-- |
38.9 |
8.3 |
4 |
0.64 |
0.64 |
1.29/1.29/-0.68 |
36 |
| C |
11.1 |
19.2 |
10.1 |
-- |
-- |
12.1 |
1.0 |
*31.3 |
-- |
-- |
4.0 |
11.1 |
14 |
0.34 |
-- |
0.12/0.13/1.52 |
99 |
| E |
-- |
0.8 |
10.5 |
9.7 |
*21.8 |
-- |
-- |
*2.4 |
0.8 |
7.3 |
18.5 |
28.2 |
21 |
0.33 |
-- |
0.15/0.50/-0.54 |
124 |
| M |
-- |
*0.9 |
0.4 |
-- |
*2.1 |
0.4 |
-- |
-- |
-- |
-- |
94.9 |
1.3 |
7 |
0.58 |
-- |
-0.28/-0.27/-0.27 |
234 |
| Triple (152:185)439 |
|---|
| Aln |
AGA |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
*70.3 |
27.2 |
2.5 |
10 |
-- |
-- |
0.60/0.47/0.67 |
839 |
| 3 |
96.7 |
1.4 |
1.9 |
7 |
-- |
-- |
1.92/1.77/1.98 |
484 |
| B |
96.7 |
2.2 |
1.1 |
4 |
-- |
-- |
1.97/1.73/2.00 |
271 |
| A |
100.0 |
-- |
-- |
1 |
-- |
-- |
2.00/2.00/2.00 |
36 |
| C |
100.0 |
-- |
-- |
1 |
-- |
-- |
2.00/2.00/2.00 |
100 |
| E |
96.0 |
0.6 |
3.4 |
6 |
-- |
-- |
1.85/1.82/1.96 |
177 |
| M |
*8.6 |
86.7 |
4.7 |
6 |
0.68 |
-- |
-0.38/-0.61/-0.40 |
255 |
| Triple (153:184)186 |
|---|
| Aln |
CGA |
UAA |
gap |
Other |
N |
CovT1 |
CovT2 |
Conservation |
Seq |
|---|
| T |
*71.0 |
1.5 |
26.6 |
0.8 |
8 |
-- |
-- |
0.47/ 0.49/ 0.57 |
841 |
| 3 |
96.7 |
1.8 |
0.8 |
0.6 |
5 |
-- |
-- |
1.78/ 1.79/ 1.91 |
488 |
| B |
98.9 |
-- |
0.7 |
0.4 |
2 |
-- |
-- |
1.94/ 1.92/ 1.96 |
272 |
| A |
100.0 |
-- |
-- |
-- |
1 |
-- |
-- |
2.00/ 2.00/ 2.00 |
36 |
| C |
100.0 |
-- |
-- |
-- |
1 |
-- |
-- |
2.00/ 2.00/ 2.00 |
100 |
| E |
92.8 |
5.0 |
1.1 |
1.1 |
4 |
-- |
-- |
1.60/ 1.63/ 1.85 |
180 |
| M |
*9.9 |
1.6 |
87.0 |
1.6 |
5 |
0.82 |
-- |
-0.49/-0.52/-0.53 |
253 |
| Triple (153:184)439 |
|---|
| Aln |
CGA |
UAA |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
70.8 |
1.5 |
26.7 |
1.0 |
9 |
-- |
-- |
0.47/0.49/0.67 |
842 |
| 3 |
96.9 |
1.8 |
0.6 |
0.6 |
5 |
-- |
-- |
1.78/1.79/1.98 |
487 |
| B |
98.9 |
-- |
0.4 |
0.7 |
3 |
-- |
-- |
1.94/1.92/2.00 |
272 |
| A |
100.0 |
-- |
-- |
-- |
1 |
-- |
-- |
2.00/2.00/2.00 |
36 |
| C |
100.0 |
-- |
-- |
-- |
1 |
-- |
-- |
2.00/2.00/2.00 |
100 |
| E |
93.3 |
5.0 |
1.1 |
0.6 |
3 |
-- |
-- |
1.60/1.63/1.96 |
179 |
| M |
9.4 |
1.6 |
87.1 |
2.0 |
6 |
-- |
-- |
-0.49/-0.52/-0.40 |
255 |
| Triple (156:180)1471 |
|---|
| Aln |
AUA |
CGA |
GCA |
GCU |
GUA |
UAA |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
14.4 |
2.6 |
*26.0 |
0.5 |
1.1 |
2.7 |
50.2 |
2.6 |
16 |
0.54 |
-- |
-0.33/-0.34/-0.14 |
815 |
| 3 |
11.5 |
4.3 |
*37.2 |
0.2 |
2.0 |
3.6 |
40.8 |
0.5 |
8 |
-- |
-- |
0.81/0.77/0.25 |
444 |
| B |
22.5 |
-- |
67.8 |
0.4 |
4.0 |
5.3 |
-- |
-- |
5 |
-- |
-- |
1.01/0.96/1.96 |
227 |
| A |
-- |
*52.8 |
30.6 |
-- |
-- |
11.1 |
-- |
5.6 |
5 |
0.56 |
-- |
0.65/0.65/1.72 |
36 |
| C |
*51.0 |
-- |
42.0 |
*2.0 |
-- |
-- |
-- |
5.0 |
7 |
0.53 |
-- |
1.00/1.00/1.63 |
100 |
| E |
-- |
-- |
0.6 |
-- |
-- |
-- |
99.4 |
-- |
1 |
-- |
-- |
1.13/1.10/-0.04 |
181 |
| M |
*5.5 |
0.7 |
1.8 |
0.4 |
-- |
2.2 |
84.1 |
5.2 |
10 |
0.44 |
-- |
-0.60/-0.61/-0.55 |
271 |
| Triple (157:179)1470 |
|---|
| Aln |
AUU |
CGA |
CGG |
CGU |
GCA |
GCC |
GCG |
GCU |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
*0.5 |
*2.5 |
1.0 |
0.6 |
4.2 |
0.6 |
*35.8 |
2.0 |
50.3 |
2.6 |
14 |
0.78 |
-- |
-0.30/-0.29/-0.52 |
815 |
| 3 |
-- |
*4.5 |
1.4 |
1.1 |
3.8 |
-- |
*47.3 |
-- |
40.8 |
1.1 |
7 |
0.88 |
0.88 |
0.77/0.79/-0.20 |
444 |
| B |
-- |
-- |
2.6 |
*2.2 |
0.4 |
-- |
*92.5 |
-- |
-- |
2.2 |
6 |
0.95 |
-- |
1.22/1.24/1.69 |
227 |
| A |
-- |
55.6 |
-- |
-- |
44.4 |
-- |
-- |
-- |
-- |
-- |
2 |
-- |
-- |
1.01/1.01/2.00 |
36 |
| C |
*2.0 |
-- |
2.0 |
-- |
13.0 |
4.0 |
*65.0 |
11.0 |
-- |
3.0 |
9 |
0.67 |
-- |
1.57/1.62/0.67 |
100 |
| E |
-- |
-- |
-- |
-- |
-- |
-- |
0.6 |
-- |
99.4 |
-- |
1 |
-- |
-- |
1.46/1.50/-0.04 |
181 |
| M |
0.7 |
-- |
-- |
-- |
1.5 |
0.4 |
*6.3 |
1.8 |
84.5 |
4.8 |
9 |
0.60 |
-- |
-0.60/-0.65/-0.61 |
271 |
| Triple (160:176)175 |
|---|
| Aln |
ACC |
ACU |
AUA |
AUC |
AUG |
AUU |
GUG |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
3.6 |
0.8 |
9.5 |
5.4 |
*54.3 |
6.9 |
0.5 |
15.9 |
3.1 |
20 |
-- |
-- |
1.35/0.68/-0.15 |
841 |
| 3 |
-- |
-- |
15.4 |
6.4 |
66.3 |
9.7 |
0.8 |
-- |
1.4 |
9 |
-- |
-- |
1.86/1.98/0.57 |
487 |
| B |
-- |
-- |
-- |
-- |
96.7 |
3.3 |
-- |
-- |
-- |
2 |
-- |
-- |
2.00/2.00/1.79 |
272 |
| A |
-- |
-- |
-- |
-- |
97.2 |
-- |
2.8 |
-- |
-- |
2 |
-- |
-- |
1.82/2.00/2.00 |
36 |
| C |
-- |
-- |
-- |
-- |
98.0 |
2.0 |
-- |
-- |
-- |
2 |
-- |
-- |
2.00/2.00/1.86 |
100 |
| E |
-- |
-- |
41.3 |
17.3 |
14.5 |
21.2 |
1.7 |
-- |
3.9 |
9 |
-- |
-- |
1.71/1.95/0.11 |
179 |
| M |
11.8 |
2.8 |
2.0 |
5.5 |
*14.2 |
3.5 |
-- |
52.8 |
7.5 |
16 |
0.31 |
-- |
0.56/-0.73/-0.93 |
254 |
| Triple (80:97)94 |
|---|
| Aln |
AGA |
AGG |
AGU |
AUG |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T
| 0.8 |
*3.4 |
2.1 |
2.4 |
90.1 |
1.2 |
10 |
0.36 |
-- |
0.01/-0.41/-0.73 |
757 |
| 3
| 1.4 |
*5.9 |
3.5 |
4.2 |
83.3 |
1.7 |
9 |
0.37 |
-- |
0.51/-0.50/-0.52 |
424 |
| B |
1.1 |
1.5 |
1.1 |
6.7 |
87.3 |
2.2 |
8 |
-- |
-- |
1.92/-0.47/0.48 |
268 |
| A
| 8.3 |
58.3 |
33.3 |
-- |
-- |
-- |
3 |
-- |
-- |
2.00/2.00/0.72 |
36 |
| C
| -- |
-- |
-- |
-- |
99.0 |
1.0 |
1 |
-- |
-- |
1.73/-0.06/0.60 |
99 |
| E |
-- |
-- |
-- |
0.8 |
98.3 |
0.8 |
2 |
-- |
-- |
-0.10/-0.09/-0.10 |
121 |
| M
| -- |
0.4 |
0.4 |
-- |
98.7 |
0.4 |
3 |
-- |
-- |
-0.29/-0.19/-0.47 |
234 |
Last modified on 26 July 2002.