23S rRNA Haloarcula marismortuiComparative/Crystal Structure Base Triple Frequencies (6/13)
| Triple (1158:1209)1188 |
|---|
| Aln |
AUA |
AUG |
AUU |
CGA |
GCA |
UAA |
UAC |
UAU |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
*40.0 |
1.3 |
0.8 |
1.5 |
29.8 |
3.1 |
*1.2 |
0.3 |
20.0 |
2.0 |
19 |
0.52 |
-- |
-0.23/-0.18/1.28 |
860 |
| 3 |
46.9 |
-- |
-- |
1.0 |
51.0 |
-- |
-- |
-- |
0.2 |
0.8 |
7 |
-- |
-- |
0.91/0.91/1.92 |
484 |
| B |
93.8 |
-- |
-- |
-- |
6.2 |
-- |
-- |
-- |
-- |
-- |
2 |
-- |
-- |
1.67/1.68/2.00 |
242 |
| A |
-- |
-- |
-- |
-- |
97.2 |
-- |
-- |
-- |
-- |
2.8 |
2 |
-- |
-- |
2.00/1.82/2.00 |
36 |
| C |
99.0 |
-- |
1.0 |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
2 |
-- |
-- |
2.00/2.00/1.92 |
100 |
| E |
0.5 |
-- |
-- |
2.4 |
95.1 |
-- |
-- |
-- |
0.5 |
1.5 |
6 |
-- |
-- |
1.74/1.70/1.83 |
206 |
| M |
*6.5 |
4.0 |
2.2 |
2.9 |
3.3 |
1.1 |
6.5 |
*8.3 |
61.2 |
4.0 |
16 |
0.38 |
-- |
-0.85/-0.86/0.18 |
276 |
| Triple (1159:1208)1189 |
|---|
| Aln |
AUA |
CAA |
GCA |
UAA |
UCA |
UGA |
UGU |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
0.7 |
0.7 |
*69.3 |
0.6 |
0.6 |
1.2 |
*2.7 |
19.7 |
4.7 |
23 |
0.90 |
-- |
0.34/0.38/1.32 |
859 |
| 3 |
-- |
-- |
98.1 |
-- |
0.2 |
-- |
-- |
0.6 |
1.0 |
5 |
-- |
-- |
1.89/1.98/1.90 |
483 |
| B |
-- |
-- |
99.6 |
-- |
-- |
-- |
-- |
-- |
0.4 |
2 |
-- |
-- |
2.00/2.00/1.96 |
242 |
| A |
-- |
-- |
100.0 |
-- |
-- |
-- |
-- |
-- |
-- |
1 |
-- |
-- |
2.00/2.00/2.00 |
36 |
| C |
3.0 |
-- |
94.0 |
-- |
2.0 |
-- |
-- |
-- |
1.0 |
4 |
-- |
-- |
1.66/1.81/1.92 |
100 |
| E |
-- |
-- |
96.1 |
-- |
0.5 |
-- |
-- |
1.5 |
2.0 |
5 |
-- |
-- |
1.77/1.95/1.83 |
205 |
| M |
1.1 |
2.2 |
9.8 |
2.2 |
0.7 |
*14.5 |
0.4 |
60.1 |
9.1 |
20 |
0.40 |
-- |
-0.81/-0.94/0.88 |
276 |
| Triple (1194:1205)1193 |
|---|
| Aln |
AUA |
AUU |
CGA |
UAG |
UUA |
UUG |
UUU |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
31.3 |
1.5 |
*1.3 |
0.6 |
1.7 |
*56.0 |
0.7 |
2.0 |
4.9 |
23 |
0.59 |
-- |
0.76/1.48/0.63 |
869 |
| 3 |
21.5 |
1.2 |
*1.4 |
-- |
0.6 |
*73.7 |
-- |
0.4 |
1.2 |
8 |
0.75 |
-- |
1.09/1.75/1.09 |
494 |
| B |
39.8 |
2.0 |
-- |
-- |
-- |
*57.0 |
-- |
0.4 |
0.8 |
5 |
-- |
-- |
1.01/1.88/0.90 |
251 |
| A |
16.2 |
2.7 |
*5.4 |
-- |
-- |
*75.7 |
-- |
-- |
-- |
4 |
0.81 |
-- |
1.01/1.70/1.08 |
37 |
| C |
-- |
-- |
-- |
2.0 |
-- |
98.0 |
-- |
-- |
-- |
2 |
-- |
-- |
2.00/1.86/2.00 |
100 |
| E |
0.5 |
-- |
*2.4 |
-- |
1.5 |
*93.2 |
-- |
0.5 |
1.9 |
5 |
0.96 |
0.96 |
1.74/1.64/1.69 |
206 |
| M |
*60.4 |
2.5 |
1.5 |
*1.1 |
4.4 |
9.1 |
2.2 |
5.5 |
13.5 |
22 |
0.67 |
-- |
0.57/1.02/0.51 |
275 |
| Triple (1195:1204)1175 |
|---|
| Aln |
AUA |
GCC |
GCG |
UAG |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
*1.0 |
0.2 |
*92.3 |
1.4 |
1.9 |
3.1 |
15 |
0.96 |
-- |
1.55/1.54/1.55 |
862 |
| 3 |
-- |
0.2 |
98.6 |
0.6 |
0.4 |
0.2 |
4 |
-- |
-- |
1.90/1.90/1.95 |
486 |
| B |
-- |
-- |
99.6 |
-- |
-- |
0.4 |
2 |
-- |
-- |
2.00/1.96/2.00 |
242 |
| A |
-- |
2.7 |
89.2 |
8.1 |
-- |
-- |
3 |
-- |
-- |
1.59/1.59/1.82 |
37 |
| C |
-- |
-- |
98.0 |
2.0 |
-- |
-- |
2 |
-- |
-- |
1.86/1.86/2.00 |
100 |
| E |
-- |
-- |
99.0 |
-- |
1.0 |
-- |
1 |
-- |
-- |
1.90/1.95/1.95 |
207 |
| M |
*3.3 |
0.4 |
*79.3 |
2.5 |
5.1 |
9.4 |
14 |
0.88 |
-- |
1.03/1.01/0.93 |
276 |
| Triple (1196:1203)1176 |
|---|
| Aln |
CGC |
UAU |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
*69.5 |
*26.9 |
1.0 |
2.6 |
16 |
0.98 |
0.98 |
0.96/1.00/1.01 |
862 |
| 3 |
*57.2 |
*42.0 |
0.4 |
0.4 |
4 |
1.00 |
1.00 |
0.96/1.00/0.99 |
486 |
| B |
99.2 |
-- |
0.4 |
0.4 |
2 |
-- |
-- |
1.92/2.00/2.00 |
243 |
| A |
*94.6 |
*5.4 |
-- |
-- |
2 |
1.00 |
1.00 |
1.70/1.70/1.70 |
37 |
| C |
100.0 |
-- |
-- |
-- |
1 |
-- |
-- |
2.00/2.00/2.00 |
100 |
| E |
*1.5 |
*97.6 |
0.5 |
0.5 |
3 |
1.00 |
1.00 |
1.72/1.81/1.84 |
206 |
| M |
*80.1 |
*10.1 |
2.5 |
7.2 |
14 |
0.93 |
0.93 |
1.01/1.04/1.10 |
276 |
| Triple (1271:1285)1030 |
|---|
| Aln |
AUA |
AUC |
AUU |
CGC |
GCA |
GCC |
UAA |
UAU |
UGA |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T
| 1.0 |
0.5 |
*1.4 |
0.3 |
*2.3 |
0.6 |
0.8 |
0.5 |
1.3 |
88.9 |
2.5 |
18 |
0.45 |
-- |
-0.79/-0.78/-0.47 |
871 |
| 3 |
1.8 |
0.6 |
*1.2 |
-- |
2.0 |
*0.2 |
1.2 |
-- |
*2.2 |
89.1 |
1.6 |
13 |
0.33 |
-- |
0.07/0.05/-0.42 |
495 |
| B |
1.6 |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
4.5 |
91.1 |
2.8 |
7 |
-- |
-- |
0.04/0.01/-0.34 |
246 |
| A |
13.9 |
8.3 |
*16.7 |
-- |
*27.8 |
2.8 |
16.7 |
-- |
-- |
11.1 |
2.8 |
7 |
0.53 |
-- |
0.45/0.27/0.17 |
36 |
| C |
-- |
-- |
9.0 |
*2.0 |
*10.0 |
-- |
1.0 |
*14.0 |
-- |
60.0 |
4.0 |
9 |
0.65 |
0.65 |
-0.21/-0.24/-0.68 |
100 |
| E |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
100.0 |
-- |
0 |
-- |
-- |
0.44/0.44/0.00 |
213 |
| M |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
100.0 |
-- |
0 |
-- |
-- |
-0.58/-0.62/0.00 |
276 |
| Triple (1273:1283)1029 |
|---|
| Aln |
AUA |
CGU |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
*0.3 |
*1.1 |
96.2 |
2.3 |
10 |
0.42 |
-- |
-0.93/-0.91/-0.21 |
873 |
| 3 |
-- |
*0.8 |
98.8 |
0.4 |
3 |
0.83 |
0.83 |
-0.29/-0.29/-0.10 |
497 |
| B |
-- |
-- |
99.2 |
0.8 |
2 |
-- |
-- |
-0.26/-0.29/-0.08 |
247 |
| A |
-- |
10.8 |
89.2 |
-- |
1 |
-- |
-- |
0.21/0.17/-0.28 |
37 |
| C |
3.0 |
-- |
97.0 |
-- |
1 |
-- |
-- |
-0.77/-0.76/-0.13 |
100 |
| E |
-- |
-- |
100.0 |
-- |
0 |
-- |
-- |
-0.09/-0.09/0.00 |
213 |
| M |
-- |
-- |
100.0 |
-- |
0 |
-- |
-- |
-0.44/-0.44/0.00 |
276 |
| Triple (1274:1282)1029 |
|---|
| Aln |
AUU |
CGU |
GUU |
UAA |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
0.8 |
0.6 |
0.2 |
0.2 |
96.4 |
1.8 |
10 |
0.38 |
-- |
-0.97/-0.96/-0.21 |
882 |
| 3 |
0.2 |
*0.2 |
0.4 |
-- |
98.8 |
0.4 |
4 |
0.50 |
-- |
-0.54/-0.52/-0.10 |
506 |
| B |
-- |
-- |
-- |
-- |
99.2 |
0.8 |
1 |
-- |
-- |
-0.51/-0.44/-0.08 |
256 |
| A |
2.7 |
2.7 |
5.4 |
-- |
89.2 |
-- |
3 |
-- |
-- |
-0.41/-0.49/-0.28 |
37 |
| C |
-- |
-- |
-- |
2.0 |
97.0 |
1.0 |
2 |
-- |
-- |
-0.82/-0.81/-0.13 |
100 |
| E |
-- |
-- |
-- |
-- |
100.0 |
-- |
0 |
-- |
-- |
-0.06/-0.10/0.00 |
213 |
| M |
-- |
-- |
-- |
-- |
100.0 |
-- |
0 |
-- |
-- |
-0.48/-0.50/0.00 |
276 |
| Triple (1305:1349)449 |
|---|
| Aln |
AUA |
CGA |
CGC |
CGU |
GCA |
GCU |
GUA |
GUU |
UAA |
UAC |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
1.6 |
*47.1 |
10.7 |
1.0 |
23.2 |
*0.5 |
3.7 |
0.2 |
2.7 |
*0.7 |
7.3 |
1.1 |
17 |
0.52 |
-- |
0.52/0.44/0.94 |
805 |
| 3 |
2.7 |
*44.8 |
-- |
1.6 |
39.9 |
*0.9 |
6.7 |
0.4 |
1.6 |
-- |
0.2 |
1.3 |
12 |
0.46 |
-- |
0.68/0.51/1.79 |
449 |
| B |
-- |
78.1 |
-- |
0.4 |
19.4 |
-- |
-- |
-- |
0.8 |
-- |
-- |
1.3 |
6 |
-- |
-- |
1.20/1.23/1.97 |
237 |
| A |
-- |
37.8 |
-- |
*16.2 |
*40.5 |
2.7 |
-- |
2.7 |
-- |
-- |
-- |
-- |
5 |
0.57 |
-- |
1.00/0.86/1.25 |
37 |
| C |
-- |
97.0 |
-- |
-- |
1.0 |
-- |
-- |
-- |
1.0 |
-- |
1.0 |
-- |
3 |
-- |
-- |
1.78/1.78/1.90 |
100 |
| E |
6.9 |
1.7 |
-- |
-- |
66.9 |
1.7 |
17.1 |
0.6 |
2.9 |
-- |
0.6 |
1.7 |
10 |
-- |
-- |
1.16/0.83/1.77 |
175 |
| M |
0.4 |
31.6 |
*33.6 |
0.4 |
2.7 |
-- |
-- |
-- |
*5.5 |
2.3 |
22.3 |
1.2 |
10 |
0.50 |
-- |
0.57/0.58/-0.01 |
256 |
| Triple (1316:1341)1313 |
|---|
| Aln |
AAA |
AAC |
AAU |
GAA |
GAC |
GAG |
GAU |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T
| 0.5 |
0.5 |
2.8 |
7.7 |
2.1 |
*34.7 |
13.2 |
35.9 |
2.8 |
19 |
0.55 |
-- |
0.20/0.47/-0.65 |
870 |
| 3
| 0.2 |
0.6 |
4.3 |
12.6 |
3.0 |
*55.7 |
18.2 |
2.0 |
3.4 |
15 |
0.58 |
-- |
1.49/1.88/0.35 |
494 |
| B
| -- |
-- |
0.8 |
13.5 |
-- |
*53.8 |
28.9 |
0.4 |
2.6 |
7 |
-- |
-- |
1.72/1.96/0.61 |
266 |
| A
| -- |
-- |
-- |
10.8 |
2.7 |
83.8 |
2.7 |
-- |
-- |
4 |
-- |
-- |
2.00/2.00/1.16 |
37 |
| C
| 2.0 |
-- |
-- |
19.0 |
-- |
*76.0 |
1.0 |
-- |
2.0 |
6 |
0.77 |
-- |
1.73/1.92/1.16 |
100 |
| E
| 0.5 |
2.1 |
9.9 |
11.5 |
7.9 |
*50.8 |
6.8 |
5.8 |
4.7 |
13 |
0.56 |
-- |
1.20/1.78/0.03 |
191 |
| M
| 0.7 |
-- |
0.7 |
0.7 |
-- |
*5.1 |
1.4 |
89.1 |
2.2 |
8 |
0.50 |
-- |
-0.45/-0.44/-0.57 |
276 |
| Triple (1322:1335)551 |
|---|
| Aln |
AUA |
AUU |
CGA |
CGG |
GCA |
UAG |
UGA |
UGC |
UGG |
UGU |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
0.1 |
*1.4 |
1.2 |
0.7 |
*3.1 |
-- |
0.3 |
0.2 |
*1.7 |
0.4 |
88.5 |
2.4 |
19 |
0.54 |
0.54 |
-0.75/-0.73/-0.52 |
936 |
| 3 |
0.2 |
*2.5 |
2.1 |
1.3 |
*5.5 |
-- |
0.6 |
0.4 |
*3.1 |
0.8 |
79.4 |
4.2 |
19 |
0.54 |
0.54 |
0.04/0.13/-0.72 |
524 |
| B |
-- |
*4.3 |
-- |
-- |
0.7 |
-- |
-- |
0.4 |
-- |
1.4 |
86.4 |
6.8 |
12 |
0.40 |
-- |
0.45/0.73/-0.55 |
280 |
| A |
-- |
-- |
18.9 |
-- |
73.0 |
-- |
8.1 |
-- |
-- |
-- |
-- |
-- |
3 |
-- |
-- |
0.92/1.16/2.00 |
37 |
| C |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
100.0 |
-- |
0 |
-- |
-- |
0.71/0.33/0.00 |
100 |
| E |
*2.1 |
-- |
1.0 |
5.2 |
-- |
2.6 |
4.2 |
3.1 |
8.3 |
*11.5 |
52.1 |
9.9 |
17 |
0.31 |
-- |
0.63/0.54/-0.92 |
192 |
| M |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
99.3 |
0.7 |
2 |
1.00 |
1.00 |
-0.52/-0.55/-0.11 |
272 |
| Triple (1323:1334)552 |
|---|
| Aln |
AUU |
CGA |
CGG |
GCA |
GCC |
GCG |
GUG |
UGA |
UGG |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
*0.2 |
0.4 |
0.7 |
*4.2 |
0.3 |
2.8 |
-- |
1.3 |
*0.8 |
87.6 |
1.7 |
18 |
0.42 |
-- |
-0.70/-0.82/-0.54 |
906 |
| 3 |
*0.4 |
0.8 |
1.2 |
*7.7 |
0.6 |
5.1 |
-- |
2.4 |
*1.4 |
77.3 |
3.0 |
18 |
0.42 |
-- |
0.26/-0.01/-0.69 |
494 |
| B |
-- |
1.2 |
2.4 |
0.4 |
*1.2 |
-- |
-- |
*4.7 |
2.8 |
83.5 |
3.9 |
12 |
0.36 |
-- |
0.17/0.20/-0.66 |
254 |
| A |
-- |
2.7 |
-- |
97.3 |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
2 |
-- |
-- |
1.82/1.82/2.00 |
37 |
| C |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
100.0 |
-- |
0 |
-- |
-- |
0.28/0.35/0.00 |
100 |
| E |
*4.5 |
-- |
*0.6 |
1.7 |
*16.4 |
-- |
3.4 |
-- |
1.1 |
55.4 |
16.9 |
23 |
0.51 |
-- |
0.54/-0.09/-0.91 |
177 |
| M |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
99.6 |
0.4 |
1 |
-- |
-- |
-0.53/-0.54/-0.10 |
272 |
| Triple (1369:2055)840 |
|---|
| Aln |
AAA |
AAC |
AAG |
AAU |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
6.1 |
2.3 |
18.1 |
71.2 |
1.4 |
0.9 |
9 |
-- |
-- |
1.77/1.88/0.93 |
784 |
| 3 |
-- |
3.1 |
0.2 |
95.3 |
0.5 |
0.9 |
5 |
-- |
-- |
1.83/1.95/1.80 |
422 |
| B |
-- |
-- |
0.4 |
99.6 |
-- |
-- |
2 |
-- |
-- |
2.00/2.00/1.97 |
234 |
| A |
-- |
32.4 |
-- |
67.6 |
-- |
-- |
2 |
-- |
-- |
2.00/2.00/1.09 |
37 |
| C |
-- |
-- |
-- |
100.0 |
-- |
-- |
1 |
-- |
-- |
2.00/2.00/2.00 |
100 |
| E |
-- |
0.7 |
-- |
95.4 |
1.3 |
2.6 |
4 |
-- |
-- |
1.63/1.88/1.92 |
151 |
| M |
18.3 |
1.9 |
53.8 |
21.4 |
3.4 |
1.1 |
7 |
-- |
-- |
1.67/1.80/0.45 |
262 |
| Triple (1371:2054)1370 |
|---|
| Aln |
UAG |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
98.1 |
1.4 |
0.5 |
5 |
-- |
-- |
1.86/1.89/1.86 |
803 |
| 3 |
99.8 |
0.2 |
-- |
1 |
-- |
-- |
1.98/2.00/1.98 |
428 |
| B |
100.0 |
-- |
-- |
1 |
-- |
-- |
2.00/2.00/2.00 |
236 |
| A |
100.0 |
-- |
-- |
1 |
-- |
-- |
2.00/2.00/2.00 |
41 |
| C |
100.0 |
-- |
-- |
1 |
-- |
-- |
2.00/2.00/2.00 |
100 |
| E |
99.3 |
0.7 |
-- |
1 |
-- |
-- |
1.94/2.00/1.94 |
151 |
| M |
94.9 |
3.6 |
1.5 |
5 |
-- |
-- |
1.67/1.76/1.67 |
275 |
| Triple (1371:2054)2648 |
|---|
| Aln |
UAA |
UAU |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
18.4 |
79.7 |
1.5 |
0.4 |
5 |
-- |
-- |
1.86/1.89/1.30 |
719 |
| 3 |
32.5 |
67.2 |
0.2 |
-- |
2 |
-- |
-- |
1.98/2.00/1.08 |
406 |
| B |
-- |
100.0 |
-- |
-- |
1 |
-- |
-- |
2.00/2.00/2.00 |
232 |
| A |
-- |
100.0 |
-- |
-- |
1 |
-- |
-- |
2.00/2.00/2.00 |
41 |
| C |
-- |
100.0 |
-- |
-- |
1 |
-- |
-- |
2.00/2.00/2.00 |
51 |
| E |
98.5 |
0.8 |
0.8 |
-- |
2 |
-- |
-- |
1.94/2.00/1.94 |
133 |
| M |
-- |
95.0 |
3.8 |
1.1 |
4 |
-- |
-- |
1.67/1.76/2.00 |
262 |
| Triple (1373:2052)1431 |
|---|
| Aln |
AUA |
AUC |
AUG |
AUU |
GCA |
GCC |
GCG |
GCU |
GUC |
GUU |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
13.3 |
6.7 |
5.2 |
*18.2 |
0.9 |
3.6 |
*14.9 |
9.3 |
10.6 |
1.9 |
14.6 |
0.9 |
16 |
0.39 |
-- |
0.73/0.88/-0.53 |
804 |
| 3 |
-- |
4.9 |
7.9 |
*13.3 |
1.6 |
5.6 |
*28.0 |
15.4 |
19.1 |
2.8 |
0.5 |
0.9 |
12 |
0.41 |
-- |
1.18/0.98/0.31 |
429 |
| B |
-- |
8.9 |
7.6 |
20.3 |
0.8 |
10.1 |
0.8 |
16.9 |
*32.5 |
1.3 |
-- |
0.8 |
10 |
0.33 |
-- |
1.07/1.12/0.67 |
237 |
| A |
-- |
-- |
*39.0 |
9.8 |
2.4 |
-- |
9.8 |
*9.8 |
12.2 |
17.1 |
-- |
-- |
7 |
0.49 |
-- |
1.00/1.24/0.46 |
41 |
| C |
2.0 |
24.0 |
1.0 |
*63.0 |
-- |
*5.0 |
-- |
3.0 |
1.0 |
-- |
1.0 |
-- |
7 |
0.69 |
-- |
1.56/1.60/0.82 |
100 |
| E |
-- |
-- |
-- |
*4.0 |
2.6 |
-- |
*75.5 |
13.9 |
-- |
1.3 |
1.3 |
1.3 |
7 |
0.81 |
-- |
1.71/1.61/1.13 |
151 |
| M |
*38.2 |
3.3 |
2.5 |
9.5 |
-- |
-- |
-- |
*2.2 |
0.7 |
1.1 |
41.5 |
1.1 |
10 |
0.69 |
-- |
0.89/1.24/-0.59 |
275 |
| Triple (1387:1395)1433 |
|---|
| Aln |
AUA |
AUG |
CGA |
GCA |
GCC |
GCG |
GCU |
UAA |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
*13.9 |
2.0 |
1.2 |
14.0 |
*33.5 |
3.5 |
0.7 |
0.7 |
29.1 |
1.5 |
17 |
0.67 |
0.67 |
-0.17/-0.16/-0.07 |
865 |
| 3 |
*24.3 |
3.5 |
2.0 |
21.3 |
*38.4 |
5.7 |
0.4 |
-- |
2.9 |
1.4 |
12 |
0.65 |
0.65 |
0.78/0.76/0.54 |
489 |
| B |
-- |
-- |
-- |
36.1 |
58.6 |
3.0 |
-- |
-- |
0.8 |
1.5 |
5 |
-- |
-- |
1.91/1.81/0.88 |
266 |
| A |
-- |
-- |
-- |
7.3 |
78.0 |
9.8 |
4.9 |
-- |
-- |
-- |
4 |
-- |
-- |
2.00/2.00/0.90 |
41 |
| C |
-- |
-- |
-- |
-- |
97.0 |
-- |
1.0 |
-- |
-- |
2.0 |
3 |
-- |
-- |
1.86/2.00/1.78 |
100 |
| E |
*64.8 |
9.3 |
5.5 |
3.3 |
-- |
*8.8 |
-- |
-- |
6.6 |
1.6 |
8 |
0.79 |
-- |
0.67/0.69/0.95 |
182 |
| M |
0.4 |
-- |
-- |
*6.2 |
1.8 |
0.7 |
1.1 |
2.2 |
86.2 |
1.4 |
9 |
0.50 |
-- |
-0.47/-0.46/-0.46 |
276 |
| Triple (1401:1721)1381 |
|---|
| Aln |
CAG |
CGA |
CGG |
GAA |
GCA |
GGA |
GUA |
UAA |
UAC |
UUU |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
0.7 |
*48.8 |
0.7 |
2.6 |
11.9 |
0.6 |
3.6 |
18.6 |
*0.8 |
0.5 |
8.5 |
2.6 |
21 |
0.54 |
-- |
0.13/0.07/1.15 |
834 |
| 3 |
-- |
*60.0 |
0.4 |
4.8 |
20.7 |
1.1 |
6.3 |
0.7 |
-- |
*0.9 |
3.5 |
1.5 |
11 |
0.63 |
-- |
0.79/0.54/1.54 |
458 |
| B |
-- |
92.3 |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
5.7 |
1.9 |
2 |
-- |
-- |
1.67/1.67/1.44 |
261 |
| A |
-- |
78.0 |
4.9 |
-- |
17.1 |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
3 |
-- |
-- |
1.34/1.34/1.72 |
41 |
| C |
-- |
96.0 |
-- |
-- |
-- |
-- |
-- |
2.0 |
-- |
-- |
1.0 |
1.0 |
3 |
-- |
-- |
1.76/1.86/1.92 |
100 |
| E |
-- |
1.9 |
-- |
14.1 |
*56.4 |
3.2 |
17.9 |
1.9 |
-- |
*2.6 |
0.6 |
1.3 |
9 |
0.59 |
-- |
1.35/0.36/1.74 |
156 |
| M |
2.2 |
13.0 |
*1.4 |
-- |
1.4 |
-- |
0.4 |
*54.3 |
2.5 |
-- |
19.6 |
5.1 |
16 |
0.69 |
-- |
0.12/0.21/0.44 |
276 |
| Triple (1403:1719)1408 |
|---|
| Aln |
CAA |
CGA |
CGC |
CGG |
CGU |
GCC |
GCG |
UAA |
UAU |
UGC |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
1.7 |
*43.7 |
4.5 |
18.5 |
16.9 |
0.6 |
*1.2 |
1.8 |
*0.7 |
0.8 |
6.9 |
2.6 |
19 |
0.49 |
-- |
1.14/1.05/-0.07 |
836 |
| 3 |
-- |
*44.6 |
0.9 |
30.4 |
18.5 |
1.1 |
*2.2 |
1.3 |
-- |
-- |
0.9 |
0.2 |
8 |
0.47 |
-- |
1.64/1.61/0.34 |
460 |
| B |
-- |
68.2 |
-- |
-- |
31.1 |
-- |
-- |
0.8 |
-- |
-- |
-- |
-- |
3 |
-- |
-- |
1.94/1.94/1.11 |
264 |
| A |
-- |
61.0 |
7.3 |
24.4 |
7.3 |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
4 |
-- |
-- |
2.00/2.00/0.52 |
41 |
| C |
-- |
96.0 |
-- |
-- |
-- |
-- |
-- |
3.0 |
-- |
-- |
1.0 |
-- |
2 |
-- |
-- |
1.81/1.81/1.90 |
100 |
| E |
-- |
0.6 |
0.6 |
*83.2 |
-- |
*3.2 |
6.5 |
*2.6 |
-- |
-- |
2.6 |
0.6 |
7 |
0.91 |
0.91 |
1.29/1.17/1.43 |
155 |
| M |
5.1 |
*23.2 |
12.3 |
5.4 |
20.3 |
-- |
-- |
2.2 |
*2.2 |
2.5 |
19.2 |
7.6 |
17 |
0.31 |
-- |
0.47/0.26/-0.56 |
276 |
| Triple (1412:1697)1487 |
|---|
| Aln |
CGA |
CGG |
CGU |
GCA |
UGA |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
3.5 |
*0.8 |
0.4 |
*16.2 |
0.3 |
77.9 |
0.9 |
12 |
0.77 |
-- |
0.03/0.11/-0.42 |
908 |
| 3 |
6.0 |
*1.3 |
0.8 |
*27.8 |
0.6 |
62.4 |
1.1 |
11 |
0.77 |
-- |
0.38/0.44/-0.33 |
529 |
| B |
-- |
-- |
-- |
-- |
-- |
100.0 |
-- |
0 |
-- |
-- |
0.97/1.00/0.00 |
327 |
| A |
63.4 |
17.1 |
9.8 |
-- |
7.3 |
-- |
2.4 |
5 |
-- |
-- |
1.54/1.84/0.91 |
41 |
| C |
-- |
-- |
-- |
-- |
-- |
100.0 |
-- |
0 |
-- |
-- |
1.12/1.11/0.00 |
103 |
| E |
3.7 |
-- |
-- |
90.7 |
-- |
2.5 |
3.1 |
7 |
-- |
-- |
1.54/1.62/1.79 |
161 |
| M |
-- |
-- |
-- |
-- |
-- |
99.3 |
0.7 |
2 |
1.00 |
1.00 |
-0.12/-0.01/-0.05 |
276 |
| Triple (1412:1697)1488 |
|---|
| Aln |
CGA |
CGC |
UGU |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
0.2 |
0.1 |
0.3 |
99.4 |
-- |
3 |
-- |
-- |
0.03/0.11/-0.05 |
928 |
| 3 |
0.4 |
0.2 |
0.5 |
98.9 |
-- |
3 |
-- |
-- |
0.38/0.44/-0.08 |
549 |
| B |
-- |
-- |
-- |
100.0 |
-- |
0 |
-- |
-- |
0.97/1.00/0.00 |
327 |
| A |
4.9 |
2.4 |
7.3 |
85.4 |
-- |
3 |
-- |
-- |
1.54/1.84/-0.52 |
41 |
| C |
-- |
-- |
-- |
100.0 |
-- |
0 |
-- |
-- |
1.12/1.11/0.00 |
103 |
| E |
-- |
-- |
-- |
100.0 |
-- |
0 |
-- |
-- |
1.54/1.62/0.00 |
181 |
| M |
-- |
-- |
-- |
100.0 |
-- |
0 |
-- |
-- |
-0.12/-0.01/0.00 |
276 |
| Triple (1416:1679)1685 |
|---|
| Aln |
GCA |
GCU |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
66.0 |
6.3 |
27.2 |
0.5 |
5 |
-- |
-- |
0.62/0.57/0.48 |
841 |
| 3 |
89.7 |
9.9 |
0.2 |
0.2 |
3 |
-- |
-- |
1.95/1.97/1.51 |
465 |
| B |
100.0 |
-- |
-- |
-- |
1 |
-- |
-- |
2.00/2.00/2.00 |
263 |
| A |
78.0 |
22.0 |
-- |
-- |
2 |
-- |
-- |
2.00/2.00/1.24 |
41 |
| C |
100.0 |
-- |
-- |
-- |
1 |
-- |
-- |
2.00/2.00/2.00 |
100 |
| E |
75.8 |
23.0 |
0.6 |
0.6 |
3 |
-- |
-- |
1.89/1.93/1.16 |
161 |
| M |
13.8 |
2.5 |
82.6 |
1.1 |
4 |
-- |
-- |
-0.34/-0.42/-0.21 |
276 |
| Triple (1418:1446)1445 |
|---|
| Aln |
AUG |
UAA |
UAC |
UAU |
UCA |
UGA |
UUA |
UUG |
gap |
Other |
N |
CovT1 |
CovT2 |
Conservation |
Seq |
|---|
| T |
0.3 |
6.0 |
0.7 |
3.7 |
2.7 |
3.2 |
1.9 |
*69.9 |
8.9 |
2.7 |
20 |
-- |
-- |
1.37/ 0.63/ 0.51 |
863 |
| 3 |
0.6 |
-- |
-- |
-- |
-- |
-- |
-- |
98.4 |
0.8 |
0.2 |
3 |
-- |
-- |
1.90/ 1.98/ 1.91 |
487 |
| B |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
99.2 |
0.8 |
-- |
1 |
-- |
-- |
2.00/ 2.00/ 1.92 |
265 |
| A |
7.3 |
-- |
-- |
-- |
-- |
-- |
-- |
92.7 |
-- |
-- |
2 |
-- |
-- |
1.62/ 2.00/ 2.00 |
41 |
| C |
-- |
-- |
-- |
-- |
-- |
-- |
2.0 |
96.0 |
1.0 |
1.0 |
3 |
-- |
-- |
1.90/ 2.00/ 1.78 |
100 |
| E |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
98.3 |
1.1 |
0.6 |
2 |
-- |
-- |
1.89/ 1.94/ 1.89 |
181 |
| M |
-- |
*18.8 |
2.2 |
11.6 |
8.3 |
10.1 |
5.1 |
10.1 |
25.7 |
8.0 |
18 |
-- |
-- |
0.60/-0.50/-0.44 |
276 |
| Triple (1419:1678)1445 |
|---|
| Aln |
UAA |
UAG |
gap |
Other |
N |
CovT1 |
CovT2 |
Conservation |
Seq |
|---|
| T |
0.7 |
69.2 |
29.0 |
1.1 |
5 |
-- |
-- |
0.73/ 0.60/ 0.51 |
842 |
| 3 |
-- |
98.5 |
1.1 |
0.4 |
2 |
-- |
-- |
1.91/ 1.96/ 1.91 |
466 |
| B |
-- |
98.1 |
1.1 |
0.8 |
2 |
-- |
-- |
1.89/ 1.94/ 1.92 |
264 |
| A |
-- |
100.0 |
-- |
-- |
1 |
-- |
-- |
2.00/ 2.00/ 2.00 |
41 |
| C |
2.0 |
97.0 |
-- |
1.0 |
3 |
-- |
-- |
2.00/ 2.00/ 1.78 |
100 |
| E |
-- |
98.8 |
1.2 |
-- |
1 |
-- |
-- |
1.94/ 2.00/ 1.89 |
161 |
| M |
1.4 |
9.8 |
86.6 |
2.2 |
4 |
-- |
-- |
0.02/-0.32/-0.44 |
276 |
| Triple (1420:1444)1502 |
|---|
| Aln |
CGA |
UAA |
UAC |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
*61.6 |
4.1 |
*2.0 |
31.0 |
1.4 |
10 |
0.92 |
-- |
0.19/0.23/0.30 |
864 |
| 3 |
*88.5 |
6.6 |
*3.5 |
1.0 |
0.4 |
5 |
0.93 |
-- |
1.44/1.50/1.71 |
488 |
| B |
99.2 |
0.4 |
-- |
0.4 |
-- |
2 |
-- |
-- |
1.96/1.96/1.96 |
266 |
| A |
70.7 |
29.3 |
-- |
-- |
-- |
2 |
-- |
-- |
1.13/1.13/2.00 |
41 |
| C |
97.0 |
-- |
-- |
-- |
3.0 |
3 |
-- |
-- |
1.86/2.00/1.92 |
100 |
| E |
*76.8 |
10.5 |
*9.4 |
2.2 |
1.1 |
5 |
0.88 |
0.88 |
1.08/1.22/1.44 |
181 |
| M |
*1.1 |
1.1 |
-- |
95.3 |
2.5 |
6 |
0.54 |
0.54 |
-0.44/-0.56/-0.24 |
276 |
| Triple (1421:1443)1501 |
|---|
| Aln |
CGA |
CGC |
CGG |
CGU |
UAA |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
*47.9 |
3.6 |
12.7 |
3.4 |
0.9 |
30.6 |
0.9 |
11 |
-- |
-- |
0.70/0.79/-0.36 |
864 |
| 3 |
*62.9 |
6.4 |
22.5 |
5.1 |
1.6 |
0.4 |
1.0 |
9 |
-- |
-- |
1.78/1.80/0.59 |
488 |
| B |
59.0 |
0.8 |
37.2 |
0.8 |
1.1 |
0.4 |
0.8 |
6 |
-- |
-- |
1.85/1.85/0.89 |
266 |
| A |
92.7 |
-- |
-- |
7.3 |
-- |
-- |
-- |
2 |
-- |
-- |
2.00/2.00/1.62 |
41 |
| C |
95.0 |
-- |
-- |
3.0 |
-- |
-- |
2.0 |
3 |
-- |
-- |
1.86/2.00/1.81 |
100 |
| E |
*61.9 |
16.0 |
6.1 |
11.0 |
2.8 |
0.6 |
1.7 |
8 |
0.63 |
-- |
1.65/1.73/0.50 |
181 |
| M |
*4.3 |
-- |
-- |
0.4 |
-- |
94.9 |
0.4 |
3 |
0.93 |
0.93 |
-0.29/-0.15/-0.25 |
276 |
| Triple (1425:1439)1428 |
|---|
| Aln |
AAA |
AUA |
AUC |
CAA |
CGA |
GCA |
GCC |
UAA |
UCC |
UUC |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
1.4 |
9.3 |
0.7 |
1.4 |
6.1 |
*33.4 |
1.4 |
15.9 |
1.1 |
*0.9 |
24.5 |
4.0 |
26 |
0.46 |
-- |
-0.40/-0.29/0.36 |
857 |
| 3 |
0.2 |
3.1 |
-- |
2.3 |
10.8 |
*51.1 |
1.2 |
26.6 |
-- |
-- |
1.7 |
2.9 |
14 |
-- |
-- |
0.40/0.44/1.71 |
481 |
| B |
-- |
1.5 |
-- |
-- |
13.1 |
79.9 |
-- |
4.2 |
-- |
-- |
0.8 |
0.4 |
5 |
-- |
-- |
1.07/1.10/1.92 |
259 |
| A |
-- |
4.9 |
-- |
-- |
-- |
85.4 |
9.8 |
-- |
-- |
-- |
-- |
-- |
3 |
-- |
-- |
1.72/1.72/1.54 |
41 |
| C |
-- |
*63.0 |
-- |
-- |
-- |
34.0 |
-- |
1.0 |
-- |
-- |
-- |
2.0 |
5 |
0.64 |
-- |
0.95/0.87/1.92 |
100 |
| E |
0.6 |
4.4 |
-- |
6.1 |
10.5 |
2.2 |
*1.1 |
*64.6 |
-- |
-- |
3.3 |
7.2 |
13 |
0.68 |
-- |
0.70/0.78/1.52 |
181 |
| M |
*4.0 |
0.7 |
2.2 |
0.4 |
-- |
2.2 |
2.2 |
2.5 |
*3.3 |
2.9 |
73.2 |
6.5 |
20 |
0.27 |
-- |
-0.48/-0.59/-0.79 |
276 |
| Triple (1429:1437)1426 |
|---|
| Aln |
AUU |
CGC |
CGG |
CGU |
GCA |
GCC |
GCG |
GCU |
UAA |
UAC |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
*7.6 |
13.1 |
*12.4 |
2.4 |
3.6 |
*13.5 |
11.9 |
5.4 |
*2.5 |
8.7 |
12.7 |
6.0 |
28 |
0.41 |
-- |
-0.34/-0.38/-0.35 |
864 |
| 3 |
*11.1 |
*23.2 |
21.7 |
4.1 |
-- |
4.3 |
*17.8 |
-- |
-- |
14.8 |
1.6 |
1.4 |
10 |
0.53 |
0.53 |
0.15/0.12/0.42 |
488 |
| B |
*20.3 |
*22.9 |
-- |
-- |
-- |
7.9 |
*32.7 |
-- |
-- |
15.0 |
0.8 |
0.4 |
6 |
0.76 |
0.76 |
0.10/0.07/0.46 |
266 |
| A |
-- |
17.1 |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
70.7 |
-- |
12.2 |
3 |
-- |
-- |
1.13/1.34/2.00 |
41 |
| C |
*1.0 |
-- |
-- |
-- |
2.0 |
*83.0 |
13.0 |
-- |
-- |
-- |
1.0 |
-- |
4 |
0.85 |
-- |
1.92/1.82/1.23 |
100 |
| E |
-- |
25.4 |
*58.0 |
11.0 |
-- |
-- |
-- |
-- |
-- |
*1.7 |
3.3 |
0.6 |
5 |
0.62 |
-- |
1.60/1.55/0.45 |
181 |
| M |
4.0 |
-- |
*0.4 |
0.4 |
10.5 |
4.7 |
1.1 |
*17.0 |
*8.0 |
1.1 |
36.6 |
16.3 |
25 |
0.42 |
-- |
-0.63/-0.59/-0.68 |
276 |
Last modified on 26 July 2002.