23S rRNA Haloarcula marismortuiComparative/Crystal Structure Base Triple Frequencies (7/13)
| Triple (1430:1436)1691 |
|---|
| Aln |
AAA |
ACA |
AUA |
AUG |
AUU |
GCA |
GCU |
GUA |
GUU |
UUU |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
0.8 |
1.9 |
2.7 |
*6.3 |
6.3 |
*58.3 |
2.2 |
2.5 |
3.3 |
0.8 |
12.2 |
2.5 |
21 |
0.74 |
-- |
0.41/0.32/0.53 |
837 |
| 3 |
-- |
-- |
0.4 |
11.1 |
*11.3 |
*63.1 |
3.9 |
-- |
6.1 |
1.5 |
1.3 |
1.3 |
11 |
0.76 |
-- |
0.88/0.89/0.71 |
461 |
| B |
-- |
-- |
-- |
-- |
-- |
96.9 |
3.1 |
-- |
-- |
-- |
-- |
-- |
2 |
-- |
-- |
2.00/2.00/1.80 |
259 |
| A |
-- |
-- |
-- |
-- |
-- |
*95.1 |
-- |
-- |
-- |
-- |
-- |
4.9 |
2 |
1.00 |
1.00 |
1.72/1.72/1.72 |
41 |
| C |
-- |
-- |
1.0 |
-- |
-- |
99.0 |
-- |
-- |
-- |
-- |
-- |
-- |
2 |
-- |
-- |
1.92/1.92/2.00 |
100 |
| E |
-- |
-- |
1.2 |
31.1 |
*32.3 |
*1.2 |
6.2 |
-- |
17.4 |
4.3 |
3.7 |
2.5 |
10 |
0.35 |
-- |
0.61/1.20/0.88 |
161 |
| M |
2.5 |
5.8 |
7.2 |
*0.7 |
0.4 |
*35.5 |
-- |
7.6 |
-- |
-- |
34.8 |
5.4 |
15 |
0.56 |
-- |
-0.31/-0.49/0.28 |
276 |
| Triple (1449:1513)1493 |
|---|
| Aln |
AUA |
CGA |
GCA |
GCG |
GUG |
UAC |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
1.3 |
1.0 |
*62.3 |
0.8 |
2.0 |
*1.2 |
30.0 |
1.5 |
16 |
0.91 |
-- |
0.49/0.10/0.18 |
864 |
| 3 |
1.0 |
1.4 |
*89.5 |
1.0 |
3.5 |
*2.0 |
0.2 |
1.2 |
12 |
0.92 |
-- |
1.58/1.43/1.53 |
488 |
| B |
-- |
-- |
100.0 |
-- |
-- |
-- |
-- |
-- |
1 |
-- |
-- |
2.00/2.00/2.00 |
266 |
| A |
-- |
-- |
97.6 |
-- |
-- |
-- |
-- |
2.4 |
2 |
-- |
-- |
1.84/2.00/2.00 |
41 |
| C |
2.0 |
-- |
96.0 |
2.0 |
-- |
-- |
-- |
-- |
3 |
-- |
-- |
1.86/1.86/1.86 |
100 |
| E |
2.8 |
3.9 |
*72.4 |
2.8 |
9.4 |
*5.5 |
0.6 |
2.8 |
11 |
0.79 |
-- |
1.12/0.84/1.05 |
181 |
| M |
1.4 |
0.7 |
*1.8 |
-- |
-- |
-- |
93.5 |
2.5 |
8 |
0.39 |
-- |
0.35/-0.37/-0.55 |
276 |
| Triple (1452:1675)1486 |
|---|
| Aln |
AUA |
AUU |
GCA |
GCC |
GCU |
GUU |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
*0.5 |
13.0 |
22.0 |
2.0 |
*33.4 |
0.7 |
27.6 |
0.8 |
9 |
0.47 |
-- |
0.72/0.69/-0.20 |
841 |
| 3 |
*0.9 |
2.2 |
39.6 |
3.0 |
*51.4 |
1.3 |
0.4 |
1.3 |
9 |
0.52 |
-- |
1.61/1.65/0.77 |
465 |
| B |
-- |
3.8 |
0.8 |
1.1 |
90.5 |
2.3 |
-- |
1.5 |
6 |
-- |
-- |
1.65/1.56/1.85 |
263 |
| A |
-- |
-- |
97.6 |
2.4 |
-- |
-- |
-- |
-- |
2 |
-- |
-- |
2.00/2.00/1.84 |
41 |
| C |
-- |
96.0 |
-- |
-- |
4.0 |
-- |
-- |
-- |
2 |
-- |
-- |
1.76/1.76/2.00 |
100 |
| E |
2.5 |
-- |
87.6 |
6.2 |
1.2 |
-- |
1.2 |
1.2 |
6 |
-- |
-- |
1.53/1.78/1.40 |
161 |
| M |
-- |
1.1 |
0.4 |
1.1 |
13.8 |
-- |
83.3 |
0.4 |
5 |
-- |
-- |
0.16/0.13/-0.42 |
276 |
| Triple (1456:1489)1656 |
|---|
| Aln |
CGA |
UAA |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
*68.3 |
1.0 |
29.4 |
1.3 |
9 |
-- |
-- |
0.51/0.52/0.46 |
860 |
| 3 |
*97.7 |
0.8 |
0.2 |
1.2 |
6 |
-- |
-- |
1.85/1.88/1.93 |
484 |
| B |
99.2 |
-- |
-- |
0.8 |
2 |
-- |
-- |
2.00/2.00/1.94 |
264 |
| A |
100.0 |
-- |
-- |
-- |
1 |
-- |
-- |
2.00/2.00/2.00 |
41 |
| C |
97.0 |
1.0 |
-- |
2.0 |
4 |
-- |
-- |
1.92/1.92/1.84 |
100 |
| E |
*95.0 |
2.2 |
0.6 |
2.2 |
6 |
0.96 |
-- |
1.65/1.74/1.91 |
179 |
| M |
6.2 |
1.4 |
91.3 |
1.1 |
5 |
-- |
-- |
-0.43/-0.43/-0.30 |
276 |
| Triple (1457:1485)1656 |
|---|
| Aln |
UAA |
gap |
Other |
N |
CovT1 |
CovT2 |
Conservation |
Seq |
|---|
| T |
69.6 |
29.5 |
0.9 |
6 |
-- |
-- |
0.61/ 0.61/ 0.46 |
861 |
| 3 |
98.8 |
0.4 |
0.8 |
3 |
-- |
-- |
1.95/ 1.95/ 1.93 |
485 |
| B |
98.9 |
-- |
1.1 |
3 |
-- |
-- |
1.96/ 2.00/ 1.94 |
265 |
| A |
100.0 |
-- |
-- |
1 |
-- |
-- |
2.00/ 2.00/ 2.00 |
41 |
| C |
98.0 |
-- |
2.0 |
3 |
-- |
-- |
2.00/ 1.92/ 1.84 |
100 |
| E |
98.3 |
1.1 |
0.6 |
2 |
-- |
-- |
1.94/ 1.89/ 1.91 |
179 |
| M |
8.0 |
91.3 |
0.7 |
3 |
-- |
-- |
-0.34/-0.32/-0.30 |
276 |
| Triple (1468:1474)1865 |
|---|
| Aln |
AAA |
AUA |
CGA |
GCA |
GUG |
UAA |
UGA |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
0.7 |
5.2 |
*30.6 |
3.6 |
*0.4 |
6.8 |
0.4 |
49.3 |
3.2 |
20 |
0.61 |
-- |
-0.74/-0.74/0.65 |
854 |
| 3 |
-- |
6.5 |
*35.1 |
5.4 |
*0.6 |
8.4 |
0.6 |
39.3 |
4.0 |
14 |
0.59 |
-- |
-0.66/-0.69/1.03 |
478 |
| B |
-- |
12.1 |
*60.9 |
0.8 |
-- |
15.6 |
0.4 |
2.7 |
7.4 |
13 |
-- |
-- |
0.67/0.50/1.64 |
256 |
| A |
-- |
-- |
29.3 |
58.5 |
7.3 |
-- |
4.9 |
-- |
-- |
4 |
-- |
-- |
0.87/0.74/1.62 |
41 |
| C |
2.0 |
5.0 |
80.0 |
1.0 |
-- |
10.0 |
-- |
1.0 |
1.0 |
6 |
-- |
-- |
1.07/0.96/2.00 |
100 |
| E |
-- |
-- |
0.6 |
-- |
-- |
-- |
-- |
99.4 |
-- |
1 |
-- |
-- |
-0.04/-0.04/0.69 |
181 |
| M |
1.4 |
2.9 |
*4.7 |
1.4 |
-- |
2.9 |
-- |
84.1 |
2.5 |
12 |
0.32 |
-- |
-0.65/-0.62/0.15 |
276 |
| Triple (1514:1672)1492 |
|---|
| Aln |
AUA |
CGA |
CGC |
CGG |
CGU |
GCA |
UAA |
UAC |
UAU |
UGA |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
2.2 |
*28.4 |
10.3 |
1.2 |
2.5 |
0.7 |
15.2 |
*4.4 |
0.9 |
1.5 |
30.6 |
2.0 |
23 |
0.48 |
-- |
-0.36/-0.34/-0.31 |
846 |
| 3 |
3.8 |
*49.4 |
17.9 |
2.1 |
3.8 |
0.9 |
12.6 |
*3.6 |
0.4 |
2.8 |
0.2 |
2.6 |
18 |
0.54 |
-- |
0.92/0.97/0.79 |
470 |
| B |
-- |
*35.1 |
31.7 |
-- |
6.8 |
0.8 |
16.2 |
*6.4 |
0.8 |
0.4 |
0.4 |
1.5 |
11 |
0.42 |
-- |
1.08/1.04/0.64 |
265 |
| A |
2.4 |
*90.2 |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
7.3 |
3 |
0.98 |
0.98 |
1.46/1.46/1.62 |
41 |
| C |
-- |
4.0 |
*3.0 |
-- |
3.0 |
2.0 |
*65.0 |
17.0 |
3.0 |
-- |
-- |
3.0 |
10 |
0.68 |
-- |
1.31/1.39/0.86 |
100 |
| E |
10.3 |
*61.8 |
-- |
6.1 |
-- |
1.2 |
9.7 |
-- |
-- |
7.3 |
0.6 |
3.0 |
11 |
0.63 |
-- |
0.74/0.92/1.52 |
165 |
| M |
0.4 |
1.4 |
-- |
-- |
-- |
-- |
*1.8 |
1.1 |
1.1 |
-- |
93.5 |
0.7 |
7 |
0.33 |
-- |
-0.31/-0.37/-0.57 |
276 |
| Triple (1531:1660)1492 |
|---|
| Aln |
AUA |
CGA |
GGA |
GGC |
GGU |
UAA |
UAC |
UGA |
UGC |
UGU |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
13.8 |
3.7 |
*17.5 |
8.0 |
2.4 |
6.6 |
*1.0 |
5.9 |
5.0 |
1.0 |
30.5 |
4.3 |
25 |
0.28 |
-- |
-0.73/-0.43/-0.31 |
861 |
| 3 |
*24.3 |
6.6 |
19.8 |
*10.3 |
3.1 |
10.9 |
1.9 |
7.4 |
8.2 |
1.9 |
0.4 |
5.2 |
19 |
0.35 |
-- |
0.13/0.54/0.79 |
485 |
| B |
-- |
0.4 |
*36.2 |
18.9 |
5.7 |
11.7 |
*3.4 |
3.8 |
15.1 |
2.3 |
-- |
2.6 |
14 |
0.40 |
-- |
0.96/1.27/0.64 |
265 |
| A |
2.4 |
39.0 |
-- |
-- |
-- |
-- |
-- |
51.2 |
-- |
7.3 |
-- |
-- |
4 |
-- |
-- |
0.89/1.84/1.62 |
41 |
| C |
-- |
-- |
*55.0 |
19.0 |
5.0 |
2.0 |
-- |
11.0 |
1.0 |
-- |
-- |
7.0 |
11 |
0.56 |
-- |
1.31/1.49/0.86 |
100 |
| E |
*64.8 |
8.4 |
0.6 |
-- |
-- |
12.3 |
-- |
2.8 |
-- |
-- |
1.1 |
10.1 |
10 |
0.68 |
-- |
0.66/0.67/1.52 |
179 |
| M |
0.4 |
-- |
-- |
-- |
0.4 |
0.7 |
-- |
*1.4 |
0.7 |
-- |
94.6 |
1.8 |
9 |
0.33 |
-- |
-0.31/-0.38/-0.57 |
276 |
| Triple (1537:1648)855 |
|---|
| Aln |
AUA |
AUC |
AUU |
CGA |
CGC |
CGG |
CGU |
UAU |
UGG |
UGU |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
3.1 |
0.7 |
*41.5 |
*2.7 |
2.6 |
2.3 |
5.7 |
2.7 |
2.1 |
0.9 |
31.9 |
3.9 |
23 |
0.66 |
-- |
-0.44/-0.41/0.53 |
819 |
| 3 |
5.2 |
1.4 |
*53.3 |
*4.7 |
4.7 |
4.3 |
10.4 |
4.3 |
3.8 |
1.4 |
0.9 |
5.6 |
22 |
0.60 |
-- |
0.50/0.56/0.65 |
443 |
| B |
-- |
-- |
*92.8 |
-- |
-- |
-- |
0.8 |
2.5 |
-- |
-- |
1.3 |
2.5 |
7 |
-- |
-- |
1.35/1.35/1.86 |
237 |
| A |
-- |
-- |
21.6 |
-- |
-- |
-- |
45.9 |
32.4 |
-- |
-- |
-- |
-- |
3 |
-- |
-- |
0.53/0.53/2.00 |
37 |
| C |
2.0 |
-- |
93.0 |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
2.0 |
3.0 |
4 |
-- |
-- |
1.71/1.76/1.86 |
100 |
| E |
*13.6 |
3.6 |
5.3 |
11.8 |
12.4 |
11.2 |
*16.0 |
0.6 |
10.1 |
3.6 |
0.6 |
11.2 |
19 |
0.32 |
-- |
0.40/0.80/0.03 |
169 |
| M |
-- |
-- |
*4.0 |
*0.4 |
-- |
-- |
0.4 |
1.1 |
-- |
0.4 |
92.4 |
1.4 |
7 |
0.57 |
-- |
-0.39/-0.34/0.88 |
276 |
| Triple (1538:1647)1597 |
|---|
| Aln |
AUA |
AUC |
AUU |
GCA |
GCC |
GCG |
GCU |
GUC |
UAG |
UGA |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
0.8 |
*1.7 |
1.0 |
*24.6 |
5.8 |
2.2 |
10.1 |
2.2 |
*0.7 |
10.7 |
36.2 |
3.8 |
26 |
0.43 |
-- |
-0.38/-0.48/-0.66 |
861 |
| 3 |
0.6 |
*3.1 |
1.4 |
*36.5 |
7.4 |
0.2 |
14.0 |
3.9 |
*1.2 |
19.0 |
6.2 |
6.4 |
25 |
0.44 |
-- |
0.59/0.54/0.26 |
485 |
| B |
0.8 |
-- |
-- |
66.2 |
-- |
0.4 |
1.1 |
-- |
-- |
21.4 |
8.6 |
1.5 |
8 |
-- |
-- |
0.93/0.87/1.30 |
266 |
| A |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
85.4 |
-- |
14.6 |
3 |
-- |
-- |
1.62/2.00/1.62 |
41 |
| C |
4.0 |
-- |
*1.0 |
*35.0 |
14.0 |
18.0 |
18.0 |
-- |
-- |
-- |
8.0 |
2.0 |
8 |
0.39 |
-- |
1.44/1.44/-0.29 |
100 |
| E |
0.6 |
*8.4 |
3.9 |
1.1 |
20.1 |
-- |
*36.3 |
10.6 |
*3.4 |
-- |
4.5 |
11.2 |
20 |
0.50 |
-- |
0.58/0.58/0.60 |
179 |
| M |
-- |
-- |
0.4 |
-- |
-- |
-- |
0.4 |
-- |
-- |
-- |
99.3 |
-- |
2 |
-- |
-- |
-0.42/-0.37/-0.08 |
276 |
| Triple (1538:1647)1598 |
|---|
| Aln |
AUA |
CGA |
GCA |
GCG |
GUG |
UAA |
UGA |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
3.3 |
0.7 |
*37.5 |
5.0 |
2.3 |
0.9 |
11.1 |
36.1 |
3.0 |
21 |
0.01 |
-- |
-0.38/-0.48/-0.09 |
861 |
| 3 |
4.7 |
1.2 |
*49.9 |
7.8 |
4.1 |
1.6 |
19.8 |
6.0 |
4.7 |
20 |
0.01 |
-- |
0.59/0.54/0.95 |
485 |
| B |
0.8 |
0.8 |
66.9 |
0.4 |
-- |
-- |
21.4 |
8.6 |
1.1 |
8 |
-- |
-- |
0.93/0.87/1.35 |
266 |
| A |
-- |
7.3 |
-- |
-- |
-- |
-- |
92.7 |
-- |
-- |
2 |
-- |
-- |
1.62/2.00/2.00 |
41 |
| C |
5.0 |
-- |
81.0 |
4.0 |
-- |
-- |
-- |
8.0 |
2.0 |
5 |
-- |
-- |
1.44/1.44/1.20 |
100 |
| E |
11.7 |
0.6 |
*36.3 |
20.7 |
11.2 |
4.5 |
0.6 |
3.9 |
10.6 |
19 |
0.40 |
-- |
0.58/0.58/0.85 |
179 |
| M |
-- |
-- |
-- |
*0.4 |
-- |
-- |
-- |
99.3 |
0.4 |
2 |
1.00 |
1.00 |
-0.42/-0.37/-0.08 |
276 |
| Triple (1545:1640)1702 |
|---|
| Aln |
AAG |
ACA |
ACG |
AGA |
AGG |
AGU |
AUG |
GAA |
GCA |
UGG |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
2.9 |
1.4 |
1.6 |
11.5 |
*16.3 |
3.9 |
1.8 |
2.7 |
*10.1 |
1.2 |
38.9 |
7.7 |
33 |
0.43 |
-- |
-0.46/-0.74/-0.36 |
853 |
| 3 |
4.8 |
1.9 |
0.6 |
18.4 |
*19.7 |
6.9 |
1.0 |
4.8 |
*18.0 |
2.1 |
11.3 |
10.3 |
30 |
0.43 |
-- |
0.58/-0.16/0.63 |
477 |
| B |
8.7 |
0.4 |
0.8 |
33.3 |
*35.6 |
-- |
1.9 |
-- |
-- |
3.8 |
11.0 |
4.5 |
15 |
-- |
-- |
1.40/0.46/0.98 |
264 |
| A |
-- |
-- |
-- |
-- |
-- |
80.5 |
-- |
-- |
-- |
-- |
-- |
19.5 |
4 |
-- |
-- |
1.47/1.13/2.00 |
41 |
| C |
2.0 |
3.0 |
11.0 |
10.0 |
*45.0 |
-- |
9.0 |
-- |
-- |
-- |
4.0 |
16.0 |
15 |
0.48 |
-- |
0.97/0.25/1.26 |
100 |
| E |
0.6 |
-- |
-- |
-- |
-- |
-- |
-- |
1.2 |
0.6 |
-- |
92.9 |
4.7 |
8 |
0.42 |
-- |
-0.66/0.28/1.54 |
170 |
| M |
-- |
-- |
-- |
-- |
-- |
-- |
0.4 |
-- |
-- |
-- |
99.3 |
0.4 |
2 |
-- |
-- |
-0.14/-0.09/-0.52 |
276 |
| Triple (1554:1567)1631 |
|---|
| Aln |
AGU |
AUU |
CGA |
CGC |
CGU |
GCA |
GCC |
GCU |
GUC |
UAC |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
3.4 |
7.8 |
4.4 |
8.4 |
*10.1 |
*5.0 |
3.7 |
2.9 |
2.3 |
*3.0 |
37.6 |
11.4 |
29 |
0.29 |
-- |
-0.83/-0.77/-0.73 |
860 |
| 3 |
6.0 |
*13.4 |
4.5 |
*9.3 |
12.8 |
*7.6 |
6.6 |
5.0 |
4.1 |
5.2 |
7.0 |
18.4 |
26 |
0.33 |
-- |
0.04/0.09/-0.01 |
484 |
| B |
-- |
*5.7 |
3.8 |
*17.0 |
11.7 |
*13.6 |
8.0 |
6.4 |
-- |
9.5 |
9.1 |
15.2 |
18 |
0.40 |
-- |
0.18/0.20/-0.19 |
264 |
| A |
-- |
-- |
26.8 |
-- |
*39.0 |
2.4 |
-- |
-- |
-- |
-- |
2.4 |
29.3 |
5 |
0.45 |
-- |
0.77/0.77/1.07 |
41 |
| C |
-- |
*3.0 |
16.0 |
*27.0 |
24.0 |
*6.0 |
-- |
1.0 |
-- |
1.0 |
14.0 |
8.0 |
13 |
0.42 |
-- |
0.73/0.52/-0.24 |
100 |
| E |
16.2 |
*27.4 |
*0.6 |
0.6 |
8.4 |
-- |
*6.1 |
3.9 |
11.2 |
-- |
5.0 |
20.7 |
19 |
0.36 |
-- |
0.55/0.35/0.43 |
179 |
| M |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
99.6 |
0.4 |
1 |
-- |
-- |
-0.16/-0.18/-0.05 |
276 |
| Triple (1725:2050)1393 |
|---|
| Aln |
AAA |
AAC |
AAG |
AAU |
CGA |
CGU |
GCA |
UAA |
UAG |
UAU |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
4.9 |
3.3 |
*4.7 |
2.6 |
*31.2 |
1.0 |
1.8 |
23.5 |
3.8 |
3.8 |
15.1 |
4.3 |
26 |
0.43 |
-- |
0.00/0.41/0.13 |
814 |
| 3 |
-- |
-- |
-- |
-- |
35.2 |
*1.9 |
3.3 |
*40.8 |
7.0 |
6.3 |
2.3 |
3.3 |
13 |
0.44 |
-- |
0.78/0.69/0.85 |
429 |
| B |
-- |
-- |
-- |
-- |
*55.9 |
3.4 |
-- |
29.8 |
*10.1 |
0.4 |
0.4 |
-- |
5 |
0.66 |
-- |
0.97/1.03/1.34 |
238 |
| A |
-- |
-- |
-- |
-- |
*43.9 |
-- |
34.1 |
7.3 |
-- |
-- |
2.4 |
12.2 |
7 |
0.47 |
-- |
0.55/0.52/1.55 |
41 |
| C |
-- |
-- |
-- |
-- |
99.0 |
-- |
-- |
1.0 |
-- |
-- |
-- |
-- |
2 |
-- |
-- |
1.92/1.92/2.00 |
100 |
| E |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
*66.9 |
4.0 |
17.2 |
6.0 |
6.0 |
7 |
0.73 |
-- |
1.62/1.49/0.29 |
151 |
| M |
*14.0 |
9.5 |
13.0 |
7.4 |
1.4 |
-- |
0.4 |
5.3 |
0.4 |
1.4 |
40.0 |
7.4 |
19 |
0.24 |
-- |
0.08/0.52/-0.87 |
285 |
| Triple (1735:2044)1375 |
|---|
| Aln |
AUA |
AUG |
CGA |
CGG |
GCA |
GCG |
UAA |
UAG |
UAU |
UGG |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
4.7 |
1.2 |
5.1 |
5.6 |
*29.6 |
1.9 |
2.1 |
*34.0 |
4.0 |
2.4 |
3.9 |
5.5 |
30 |
0.67 |
0.67 |
0.28/0.21/0.43 |
802 |
| 3 |
-- |
0.2 |
7.9 |
7.7 |
*32.0 |
2.6 |
0.7 |
*39.5 |
-- |
4.4 |
0.9 |
4.0 |
19 |
0.73 |
0.73 |
0.47/0.38/0.80 |
428 |
| B |
-- |
0.4 |
-- |
14.0 |
-- |
3.4 |
-- |
71.6 |
-- |
8.1 |
-- |
2.5 |
10 |
-- |
-- |
1.14/0.94/1.96 |
236 |
| A |
-- |
-- |
82.9 |
-- |
2.4 |
-- |
7.3 |
-- |
-- |
-- |
-- |
7.3 |
4 |
-- |
-- |
1.24/1.46/2.00 |
41 |
| C |
-- |
-- |
-- |
1.0 |
-- |
-- |
-- |
97.0 |
2.0 |
-- |
-- |
-- |
3 |
-- |
-- |
1.92/1.92/1.86 |
99 |
| E |
-- |
-- |
-- |
-- |
*89.4 |
2.0 |
-- |
*0.7 |
-- |
-- |
2.6 |
5.3 |
8 |
0.94 |
-- |
1.81/1.72/1.35 |
151 |
| M |
13.8 |
3.3 |
2.5 |
*4.0 |
*36.4 |
1.5 |
5.1 |
2.9 |
*10.9 |
-- |
9.8 |
9.8 |
23 |
0.57 |
-- |
0.09/0.13/0.20 |
275 |
| Triple (1736:2043)1376 |
|---|
| Aln |
AUG |
CGG |
GCG |
GUG |
UAG |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
0.5 |
2.8 |
0.1 |
0.5 |
0.4 |
95.6 |
-- |
5 |
-- |
-- |
0.19/0.19/-0.17 |
929 |
| 3 |
0.9 |
4.7 |
0.2 |
0.9 |
0.7 |
92.5 |
-- |
5 |
-- |
-- |
0.39/0.36/-0.23 |
550 |
| B |
-- |
-- |
-- |
-- |
-- |
100.0 |
-- |
0 |
-- |
-- |
0.69/0.61/0.00 |
327 |
| A |
12.2 |
63.4 |
2.4 |
12.2 |
9.8 |
-- |
-- |
5 |
-- |
-- |
0.48/0.63/2.00 |
41 |
| C |
-- |
-- |
-- |
-- |
-- |
100.0 |
-- |
0 |
-- |
-- |
1.81/1.81/0.00 |
103 |
| E |
-- |
-- |
-- |
-- |
-- |
100.0 |
-- |
0 |
-- |
-- |
1.34/1.22/0.00 |
182 |
| M |
-- |
-- |
-- |
-- |
-- |
100.0 |
-- |
0 |
-- |
-- |
0.47/0.45/0.00 |
276 |
| Triple (1736:2043)1380 |
|---|
| Aln |
AUA |
AUU |
CGA |
CGG |
CGU |
GCA |
GUU |
UAA |
UAU |
UGU |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
20.8 |
2.0 |
*33.3 |
1.4 |
3.6 |
5.9 |
0.5 |
3.7 |
*13.9 |
1.2 |
9.5 |
4.2 |
28 |
0.53 |
-- |
0.19/0.19/0.42 |
803 |
| 3 |
6.1 |
1.4 |
*36.6 |
-- |
5.8 |
3.5 |
0.7 |
4.4 |
*25.9 |
2.3 |
10.3 |
3.0 |
19 |
0.70 |
0.70 |
0.39/0.36/0.33 |
429 |
| B |
11.0 |
*0.4 |
*57.4 |
-- |
-- |
5.9 |
-- |
4.6 |
0.4 |
-- |
18.1 |
2.1 |
10 |
0.71 |
-- |
0.69/0.61/0.95 |
237 |
| A |
-- |
*12.2 |
*51.2 |
-- |
12.2 |
2.4 |
7.3 |
9.8 |
-- |
-- |
-- |
4.9 |
8 |
0.63 |
-- |
0.48/0.63/0.95 |
41 |
| C |
-- |
-- |
94.9 |
-- |
2.0 |
-- |
-- |
3.0 |
-- |
-- |
-- |
-- |
3 |
-- |
-- |
1.81/1.81/1.86 |
99 |
| E |
-- |
-- |
*0.7 |
-- |
13.2 |
-- |
-- |
2.6 |
*72.2 |
6.6 |
0.7 |
4.0 |
9 |
0.74 |
-- |
1.34/1.22/1.38 |
151 |
| M |
*51.3 |
3.6 |
5.8 |
*4.0 |
0.7 |
11.6 |
0.4 |
2.9 |
*0.4 |
-- |
11.6 |
7.6 |
21 |
0.63 |
-- |
0.47/0.45/0.55 |
275 |
| Triple (1738:2041)2726 |
|---|
| Aln |
AUA |
AUC |
AUU |
CGG |
CGU |
GCA |
GCC |
GCG |
GCU |
UAU |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
0.7 |
*1.4 |
2.0 |
*0.6 |
22.4 |
8.7 |
3.1 |
2.1 |
*23.8 |
1.8 |
30.3 |
3.2 |
19 |
0.38 |
-- |
0.36/0.32/-0.34 |
715 |
| 3 |
0.7 |
*1.7 |
1.2 |
*0.2 |
25.4 |
14.8 |
5.2 |
3.2 |
*39.9 |
1.0 |
1.5 |
5.2 |
19 |
0.43 |
-- |
0.71/0.65/0.59 |
406 |
| B |
-- |
*2.2 |
1.7 |
-- |
*40.9 |
-- |
4.3 |
*4.7 |
37.9 |
1.7 |
0.4 |
6.0 |
13 |
0.49 |
-- |
0.57/0.47/1.17 |
232 |
| A |
-- |
-- |
-- |
-- |
19.5 |
-- |
-- |
2.4 |
78.0 |
-- |
-- |
-- |
3 |
-- |
-- |
1.29/1.29/1.84 |
41 |
| C |
-- |
-- |
-- |
5.4 |
87.5 |
-- |
-- |
-- |
-- |
7.1 |
-- |
-- |
3 |
-- |
-- |
1.76/1.76/1.71 |
56 |
| E |
2.3 |
1.5 |
0.8 |
0.8 |
-- |
*45.1 |
8.3 |
0.8 |
31.6 |
-- |
3.8 |
5.3 |
12 |
0.49 |
-- |
1.41/1.43/0.23 |
133 |
| M |
0.8 |
1.2 |
*3.6 |
-- |
3.2 |
*0.8 |
0.4 |
0.8 |
3.2 |
2.0 |
83.4 |
0.8 |
10 |
0.26 |
-- |
0.31/0.37/-0.53 |
253 |
| Triple (1742:2037)2033 |
|---|
| Aln |
ACG |
AUG |
gap |
Other |
N |
CovT1 |
CovT2 |
Conservation |
Seq |
|---|
| T |
*94.3 |
2.6 |
1.5 |
1.6 |
11 |
-- |
-- |
1.80/ 1.67/ 1.77 |
806 |
| 3 |
97.7 |
1.9 |
-- |
0.5 |
4 |
-- |
-- |
1.98/ 1.86/ 1.98 |
429 |
| B |
99.6 |
-- |
-- |
0.4 |
2 |
-- |
-- |
2.00/ 2.00/ 1.96 |
237 |
| A |
80.5 |
19.5 |
-- |
-- |
2 |
-- |
-- |
2.00/ 1.29/ 2.00 |
41 |
| C |
96.0 |
4.0 |
-- |
-- |
2 |
-- |
-- |
2.00/ 1.76/ 2.00 |
101 |
| E |
99.3 |
-- |
-- |
0.7 |
2 |
-- |
-- |
1.94/ 1.94/ 2.00 |
151 |
| M |
*88.4 |
3.3 |
4.3 |
4.0 |
10 |
0.94 |
-- |
1.52/ 1.45/ 1.50 |
276 |
| Triple (1745:2034)1747 |
|---|
| Aln |
GUA |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
97.3 |
2.0 |
0.7 |
7 |
-- |
-- |
1.81/1.87/1.82 |
808 |
| 3 |
99.3 |
-- |
0.7 |
4 |
-- |
-- |
1.96/1.98/1.98 |
431 |
| B |
99.2 |
-- |
0.8 |
3 |
-- |
-- |
1.96/1.96/2.00 |
237 |
| A |
100.0 |
-- |
-- |
1 |
-- |
-- |
2.00/2.00/2.00 |
41 |
| C |
100.0 |
-- |
-- |
1 |
-- |
-- |
2.00/2.00/2.00 |
101 |
| E |
99.3 |
-- |
0.7 |
2 |
-- |
-- |
1.95/2.00/1.95 |
153 |
| M |
93.1 |
5.8 |
1.1 |
4 |
-- |
-- |
1.57/1.73/1.59 |
276 |
| Triple (1746:2032)1753 |
|---|
| Aln |
AUC |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
97.5 |
1.9 |
0.6 |
4 |
-- |
-- |
1.80/1.86/1.84 |
806 |
| 3 |
99.3 |
-- |
0.7 |
4 |
-- |
-- |
1.96/1.98/2.00 |
429 |
| B |
99.6 |
-- |
0.4 |
2 |
-- |
-- |
2.00/1.96/2.00 |
235 |
| A |
100.0 |
-- |
-- |
1 |
-- |
-- |
2.00/2.00/2.00 |
41 |
| C |
100.0 |
-- |
-- |
1 |
-- |
-- |
2.00/2.00/2.00 |
101 |
| E |
98.7 |
-- |
1.3 |
3 |
-- |
-- |
1.89/2.00/2.00 |
153 |
| M |
93.8 |
5.4 |
0.7 |
3 |
-- |
-- |
1.54/1.69/1.61 |
276 |
| Triple (1746:2032)1754 |
|---|
| Aln |
AUA |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
97.2 |
1.9 |
1.0 |
6 |
-- |
-- |
1.80/1.86/1.81 |
808 |
| 3 |
98.8 |
-- |
1.2 |
5 |
-- |
-- |
1.96/1.98/1.96 |
431 |
| B |
99.6 |
-- |
0.4 |
2 |
-- |
-- |
2.00/1.96/2.00 |
237 |
| A |
100.0 |
-- |
-- |
1 |
-- |
-- |
2.00/2.00/2.00 |
41 |
| C |
99.0 |
-- |
1.0 |
2 |
-- |
-- |
2.00/2.00/1.92 |
101 |
| E |
97.4 |
-- |
2.6 |
4 |
-- |
-- |
1.89/2.00/1.90 |
153 |
| M |
93.8 |
5.4 |
0.7 |
3 |
-- |
-- |
1.54/1.69/1.61 |
276 |
| Triple (1752:2031)1755 |
|---|
| Aln |
GCA |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
97.2 |
2.0 |
0.9 |
5 |
-- |
-- |
1.78/1.80/1.84 |
808 |
| 3 |
98.8 |
0.2 |
0.9 |
4 |
-- |
-- |
1.93/1.95/1.97 |
431 |
| B |
99.2 |
-- |
0.8 |
3 |
-- |
-- |
2.00/1.92/2.00 |
237 |
| A |
100.0 |
-- |
-- |
1 |
-- |
-- |
2.00/2.00/2.00 |
41 |
| C |
100.0 |
-- |
-- |
1 |
-- |
-- |
2.00/2.00/2.00 |
101 |
| E |
98.0 |
0.7 |
1.3 |
2 |
-- |
-- |
1.84/2.00/1.93 |
153 |
| M |
93.5 |
5.4 |
1.1 |
2 |
-- |
-- |
1.52/1.59/1.61 |
276 |
| Triple (1760:1784)1777 |
|---|
| Aln |
AUG |
AUU |
CGG |
CGU |
GCG |
GCU |
GUA |
GUG |
GUU |
UAU |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
*13.1 |
2.0 |
4.9 |
*1.8 |
9.8 |
1.4 |
10.2 |
11.4 |
11.7 |
0.8 |
27.6 |
5.3 |
23 |
0.22 |
-- |
-0.40/-0.37/-0.49 |
837 |
| 3 |
18.7 |
0.9 |
*8.5 |
3.1 |
9.6 |
2.6 |
18.1 |
11.1 |
*21.1 |
1.3 |
0.2 |
4.8 |
17 |
0.30 |
-- |
0.61/0.74/0.44 |
459 |
| B |
*32.3 |
1.1 |
14.8 |
*5.3 |
16.3 |
4.6 |
-- |
4.6 |
12.5 |
2.3 |
0.4 |
5.7 |
15 |
0.40 |
-- |
0.22/0.31/1.00 |
263 |
| A |
2.4 |
-- |
-- |
-- |
2.4 |
-- |
-- |
73.2 |
22.0 |
-- |
-- |
-- |
4 |
-- |
-- |
1.84/1.84/1.24 |
41 |
| C |
14.9 |
5.9 |
-- |
-- |
37.6 |
-- |
1.0 |
40.6 |
-- |
-- |
-- |
-- |
5 |
-- |
-- |
1.26/1.04/1.60 |
101 |
| E |
-- |
0.6 |
-- |
-- |
0.6 |
-- |
53.5 |
5.8 |
34.8 |
-- |
-- |
4.5 |
7 |
-- |
-- |
1.90/1.94/0.55 |
155 |
| M |
*3.2 |
2.5 |
0.7 |
0.4 |
-- |
-- |
0.4 |
1.1 |
0.4 |
0.4 |
83.0 |
7.9 |
17 |
0.25 |
-- |
-0.56/-0.57/-0.61 |
277 |
| Triple (1765:1779)1819 |
|---|
| Aln |
GAA |
GAG |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
5.9 |
64.6 |
27.5 |
2.0 |
10 |
-- |
-- |
0.47/0.58/0.55 |
836 |
| 3 |
7.9 |
91.7 |
-- |
0.4 |
4 |
-- |
-- |
1.98/1.98/1.58 |
458 |
| B |
2.3 |
97.7 |
-- |
-- |
2 |
-- |
-- |
2.00/2.00/1.84 |
263 |
| A |
2.4 |
97.6 |
-- |
-- |
2 |
-- |
-- |
2.00/2.00/1.84 |
41 |
| C |
4.0 |
93.1 |
-- |
3.0 |
4 |
-- |
-- |
1.86/1.92/1.76 |
101 |
| E |
18.8 |
79.9 |
-- |
1.3 |
4 |
-- |
-- |
1.94/1.94/1.25 |
154 |
| M |
3.2 |
9.4 |
83.0 |
4.3 |
8 |
-- |
-- |
-0.49/-0.32/-0.02 |
277 |
Last modified on 26 July 2002.