Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 1A9N
BPC Identified: 12
Ambiguities: 0
| snoRNA |
1A9N |
0!Q:22!Q |
C:G |
WC [cWW][XIX] |
10.31 |
58.45; 57.9 |
0.55 |
-10.74 |
0.84 |
25.12 |
| snoRNA |
1A9N |
1!Q:21!Q |
C:G |
WC [cWW][XIX] |
10.56 |
56.82; 52.79 |
4.04 |
-8.57 |
0.11 |
16.37 |
| snoRNA |
1A9N |
2!Q:20!Q |
U:A |
WC [cWW][XX] |
10.31 |
61.1; 58.65 |
2.46 |
-3.93 |
0.09 |
6.06 |
| snoRNA |
1A9N |
3!Q:19!Q |
G:C |
WC [cWW][XIX] |
10.41 |
55.59; 59.02 |
3.44 |
-8.77 |
0.08 |
10.72 |
| snoRNA |
1A9N |
4!Q:18!Q |
G:C |
WC [cWW][XIX] |
10.49 |
56.55; 54.92 |
1.63 |
-11.42 |
0.04 |
14.67 |
| snoRNA |
1A9N |
5!Q:17!Q |
U:U |
Wb [cWW][XVI] |
8.77 |
78.35; 43.02 |
35.33 |
-17.49 |
0.56 |
22.69 |
| snoRNA |
1A9N |
0!R:22!R |
C:G |
WC [cWW][XIX] |
10.45 |
52.77; 54.14 |
1.37 |
-9.1 |
0.57 |
18.87 |
| snoRNA |
1A9N |
1!R:21!R |
C:G |
WC [cWW][XIX] |
10.47 |
57.21; 53.84 |
3.37 |
-8.38 |
0.09 |
14.1 |
| snoRNA |
1A9N |
2!R:20!R |
U:A |
WC [cWW][XX] |
10.29 |
61.24; 60.65 |
0.59 |
-5.94 |
0.04 |
7.55 |
| snoRNA |
1A9N |
3!R:19!R |
G:C |
WC [cWW][XIX] |
10.43 |
56.12; 55.59 |
0.53 |
-8.64 |
0.06 |
12.26 |
| snoRNA |
1A9N |
4!R:18!R |
G:C |
WC [cWW][XIX] |
10.4 |
60.89; 58.22 |
2.68 |
-11.25 |
0.23 |
12.18 |
| snoRNA |
1A9N |
5!R:17!R |
U:U |
Wb [cWW][XVI] |
8.93 |
77.33; 44.02 |
33.31 |
-13.34 |
0.39 |
18.96 |