Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 1AQ3
BPC Identified: 8
Ambiguities: 0
| vRNA |
1AQ3 |
3!R:17!R |
A:U |
WC [cWW][XX] |
10.13 |
52.33; 59.48 |
7.15 |
-18.61 |
0.23 |
20.48 |
| vRNA |
1AQ3 |
4!R:16!R |
U:A |
WC [cWW][XX] |
10.16 |
56.4; 57.25 |
0.86 |
-9.5 |
0.06 |
13.87 |
| vRNA |
1AQ3 |
5!R:15!R |
G:C |
WC [cWW][XIX] |
10.29 |
50.01; 58.54 |
8.53 |
-2.49 |
0.24 |
12.1 |
| vRNA |
1AQ3 |
7!R:14!R |
G:C |
WC [cWW][XIX] |
10.48 |
46.47; 58.06 |
11.59 |
-3.83 |
0.04 |
9.36 |
| vRNA |
1AQ3 |
8!R:13!R |
G:C |
WC [cWW][XIX] |
10.77 |
51.61; 59.83 |
8.22 |
7.47 |
0.15 |
6.18 |
| vRNA |
1AQ3 |
5!S:15!S |
G:C |
WC [cWW][XIX] |
10.46 |
50.56; 56.89 |
6.33 |
-9.62 |
0.07 |
17.67 |
| vRNA |
1AQ3 |
7!S:14!S |
G:C |
WC [cWW][XIX] |
10.83 |
49.91; 55.94 |
6.03 |
-2.83 |
0.17 |
11.68 |
| vRNA |
1AQ3 |
8!S:13!S |
G:C |
WC [cWW][XIX] |
10.85 |
55.67; 49.85 |
5.82 |
5.45 |
0.3 |
6.83 |