Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 1AQ4
BPC Identified: 9
Ambiguities: 0
| vRNA |
1AQ4 |
3!R:17!R |
A:U |
WC [cWW][XX] |
10.18 |
52.84; 57.67 |
4.83 |
-17.34 |
0.23 |
17.97 |
| vRNA |
1AQ4 |
4!R:16!R |
U:A |
WC [cWW][XX] |
10.23 |
55.1; 57.16 |
2.06 |
-11.82 |
0.01 |
16.78 |
| vRNA |
1AQ4 |
5!R:15!R |
G:C |
WC [cWW][XIX] |
10.42 |
50.61; 57.95 |
7.33 |
-4.1 |
0.21 |
12.68 |
| vRNA |
1AQ4 |
7!R:14!R |
G:C |
WC [cWW][XIX] |
10.52 |
47.24; 57.56 |
10.32 |
-3.11 |
0.01 |
8.72 |
| vRNA |
1AQ4 |
8!R:13!R |
G:C |
WC [cWW][XIX] |
10.61 |
52.21; 60.73 |
8.52 |
7.02 |
0.25 |
7.82 |
| vRNA |
1AQ4 |
4!S:16!S |
U:A |
WC [cWW][XX] |
10.47 |
54.93; 53.55 |
1.38 |
-1.5 |
0.04 |
11.03 |
| vRNA |
1AQ4 |
5!S:15!S |
G:C |
WC [cWW][XIX] |
10.33 |
49.0; 57.8 |
8.79 |
0.93 |
0.24 |
11.27 |
| vRNA |
1AQ4 |
7!S:14!S |
G:C |
WC [cWW][XIX] |
10.81 |
53.69; 53.12 |
0.57 |
1.76 |
0.05 |
11.29 |
| vRNA |
1AQ4 |
8!S:13!S |
G:C |
WC [cWW][XIX] |
10.6 |
55.07; 52.92 |
2.15 |
13.69 |
0.42 |
14.27 |