Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 1CX0 BPC Identified: 32 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
HDV_ribozyme 1CX0 101!B:137!B G:U Wb [cWW][XXVIII] 10.76 42.44; 69.9 27.46 -0.95 0.01 3.58
HDV_ribozyme 1CX0 102!B:136!B G:C WC [cWW][XIX] 10.32 58.48; 53.88 4.6 3.21 0.07 14.82
HDV_ribozyme 1CX0 103!B:135!B C:G WC [cWW][XIX] 10.36 59.47; 51.31 8.16 0.91 0.23 5.93
HDV_ribozyme 1CX0 104!B:134!B C:G WC [cWW][XIX] 10.37 56.28; 56.95 0.67 3.34 0.02 5.95
HDV_ribozyme 1CX0 105!B:133!B G:C WC [cWW][XIX] 10.38 55.08; 58.66 3.58 -6.97 0.01 7.72
HDV_ribozyme 1CX0 106!B:132!B G:C WC [cWW][XIX] 10.47 60.43; 53.53 6.9 -6.25 0.07 9.2
HDV_ribozyme 1CX0 107!B:131!B C:G WC [cWW][XIX] 10.86 53.14; 54.79 1.65 -3.67 0.37 21.96
HDV_ribozyme 1CX0 111!B:172!B G:C WC [cWW][XIX] 10.84 51.51; 58.97 7.46 -10.94 0.82 5.34
HDV_ribozyme 1CX0 112!B:171!B U:A WC [cWW][XX] 10.55 56.8; 56.24 0.56 -11.99 0.08 17.79
HDV_ribozyme 1CX0 113!B:170!B C:G WC [cWW][XIX] 10.49 56.52; 55.38 1.14 -8.05 0.14 11.11
HDV_ribozyme 1CX0 114!B:169!B C:G WC [cWW][XIX] 10.39 57.96; 52.39 5.57 -5.07 0.06 10.46
HDV_ribozyme 1CX0 115!B:168!B C:G WC [cWW][XIX] 10.81 54.82; 52.84 1.98 -2.53 0.06 7.71
HDV_ribozyme 1CX0 116!B:167!B A:U WC [cWW][XX] 10.03 62.81; 63.13 0.32 2.82 0.32 7.34
HDV_ribozyme 1CX0 117!B:130!B G:C WC [cWW][XIX] 10.77 51.91; 55.77 3.86 -15.46 0.25 21.06
HDV_ribozyme 1CX0 118!B:166!B C:A rpS(bs:O2-O2*) [cSS][-] 5.51 99.22; 157.25 58.03 -49.74 2.48 15.07
HDV_ribozyme 1CX0 118!B:129!B C:G WC [cWW][XIX] 10.53 52.36; 55.24 2.87 -24.08 0.33 33.07
HDV_ribozyme 1CX0 119!B:165!B C:A rpS(sb:O2*-N3) [cSS][-] 5.78 154.93; 91.98 62.95 -45.68 0.67 21.63
HDV_ribozyme 1CX0 119!B:128!B C:G WC [cWW][XIX] 10.49 50.88; 49.83 1.05 -22.58 0.28 22.35
HDV_ribozyme 1CX0 120!B:122!B U:C pS(sp:O2*-O2P) [---][-] 9.5 123.05; 79.56 43.48 173.44 2.43 27.1
HDV_ribozyme 1CX0 121!B:142!B C:A pfS [cSW][-] 9.59 120.04; 31.71 88.32 -14.24 0.37 31.34
HDV_ribozyme 1CX0 121!B:139!B C:G WC [cWW][XIX] 10.78 48.52; 53.67 5.16 -22.67 0.44 30.47
HDV_ribozyme 1CX0 122!B:138!B C:G WC [cWW][XIX] 10.64 56.93; 56.71 0.22 -1.9 0.51 13.86
HDV_ribozyme 1CX0 129!B:166!B G:A rS [tSS][-] 7.96 85.68; 61.54 24.14 155.32 1.2 43.45
HDV_ribozyme 1CX0 140!B:142!B G:A pS_1 [cSH][-] 7.93 139.0; 25.38 113.62 -28.65 0.64 46.74
HDV_ribozyme 1CX0 141!B:161!B C:G rH_1 [tWH][-] 10.8 27.89; 6.43 21.46 -175.55 0.08 3.67
HDV_ribozyme 1CX0 141!B:143!B C:A pS [cSH][-] 9.17 116.47; 17.71 98.76 -5.6 0.27 24.97
HDV_ribozyme 1CX0 143!B:162!B A:G WC [cWW][VIII] 12.87 48.08; 48.95 0.87 -9.26 0.09 24.17
HDV_ribozyme 1CX0 144!B:161!B C:G WC [cWW][XIX] 10.58 56.95; 53.83 3.12 -17.5 0.18 26.93
HDV_ribozyme 1CX0 145!B:160!B A:U WC [cWW][XX] 10.59 57.37; 57.36 0.01 -9.73 0.05 9.31
HDV_ribozyme 1CX0 146!B:159!B C:G WC [cWW][XIX] 10.49 56.05; 55.52 0.53 -9.37 0.08 14.27
HDV_ribozyme 1CX0 147!B:158!B C:G WC [cWW][XIX] 10.52 55.82; 53.29 2.52 -4.26 0.08 6.51
HDV_ribozyme 1CX0 155!B:156!B U:C pS [cSH][-] 7.26 140.5; 44.93 95.57 12.39 0.87 28.17