Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 1DK1 BPC Identified: 23 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
rRNA 1DK1 1!B:57!B G:C WC [cWW][XIX] 11.13 52.46; 46.12 6.34 2.43 0.38 1.36
rRNA 1DK1 2!B:56!B G:U Wb [cWW][XXVIII] 10.14 44.07; 66.1 22.04 -12.31 0.08 15.27
rRNA 1DK1 3!B:55!B G:C WC [cWW][XIX] 10.78 52.49; 51.65 0.84 0.93 0.06 4.58
rRNA 1DK1 4!B:54!B C:G WC [cWW][XIX] 10.74 52.14; 53.6 1.46 -0.66 0.07 2.25
rRNA 1DK1 6!B:15!B G:C WC [cWW][XIX] 10.39 53.55; 52.53 1.01 -8.2 0.42 17.79
rRNA 1DK1 7!B:14!B C:G WC [cWW][XIX] 10.39 54.4; 56.41 2.01 -4.82 0.69 20.88
rRNA 1DK1 8!B:13!B C:G WC [cWW][XIX] 10.43 56.35; 58.88 2.52 4.1 0.09 13.16
rRNA 1DK1 9!B:12!B U:G fS_1 [tSW][-] 9.43 101.45; 24.69 76.75 165.93 0.1 13.69
rRNA 1DK1 16!B:52!B U:A rH_1 [tWH][XXIV] 9.66 26.34; 21.95 4.39 175.96 0.25 7.72
rRNA 1DK1 18!B:53!B G:C WC [cWW][XIX] 10.75 52.75; 49.71 3.04 7.33 0.15 10.39
rRNA 1DK1 18!B:51!B G:G S_1 [tSH][-] 10.76 15.85; 93.28 77.43 -10.42 0.51 16.6
rRNA 1DK1 19!B:50!B A:U WC [cWW][XX] 10.64 54.3; 50.87 3.44 -7.73 0.06 9.92
rRNA 1DK1 20!B:49!B C:G WC [cWW][XIX] 10.41 56.85; 53.32 3.53 -6.98 0.12 8.42
rRNA 1DK1 21!B:48!B G:C WC [cWW][XIX] 10.62 53.94; 55.19 1.25 0.99 0.2 8.78
rRNA 1DK1 22!B:46!B G:C WC [cWW][XIX] 10.67 46.6; 54.12 7.52 -7.15 0.32 11.18
rRNA 1DK1 23!B:45!B U:A WC [cWW][XX] 10.05 51.47; 60.66 9.19 -4.57 0.01 8.24
rRNA 1DK1 24!B:44!B G:C WC [cWW][XIX] 10.15 52.73; 58.8 6.07 0.36 0.17 6.11
rRNA 1DK1 25!B:43!B G:C WC [cWW][XIX] 10.7 48.29; 56.13 7.84 -8.28 0.09 13.65
rRNA 1DK1 26!B:42!B G:U Wb [cWW][XXVIII] 10.56 42.47; 63.2 20.73 -15.13 0.71 18.59
rRNA 1DK1 27!B:41!B A:G rWb* [---][-] 12.46 45.54; 46.41 0.88 -0.02 0.61 12.39
rRNA 1DK1 30!B:39!B G:U Wb [cWW][XXVIII] 10.46 36.59; 71.27 34.68 -4.58 0.03 12.42
rRNA 1DK1 31!B:38!B G:C WC [cWW][XIX] 10.66 52.88; 47.02 5.87 -2.21 0.02 6.0
rRNA 1DK1 32!B:37!B C:G WC [cWW][XIX] 10.18 58.62; 50.0 8.61 3.92 0.37 12.89