Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 1DQH
BPC Identified: 9
Ambiguities: 0
| rRNA |
1DQH |
1!A:19!B |
G:C |
WC [cWW][XIX] |
10.7 |
52.07; 55.29 |
3.22 |
-10.47 |
0.09 |
10.51 |
| rRNA |
1DQH |
2!A:18!B |
C:G |
WC [cWW][XIX] |
10.59 |
54.49; 54.38 |
0.11 |
-19.5 |
0.29 |
16.19 |
| rRNA |
1DQH |
3!A:17!B |
C:G |
WC [cWW][XIX] |
10.81 |
52.62; 52.24 |
0.38 |
-14.58 |
0.27 |
13.11 |
| rRNA |
1DQH |
4!A:15!B |
A:U |
WC [cWW][XX] |
10.5 |
52.86; 57.06 |
4.19 |
-5.58 |
0.17 |
10.35 |
| rRNA |
1DQH |
5!A:14!B |
C:G |
WC [cWW][XIX] |
10.71 |
55.36; 51.62 |
3.74 |
-9.04 |
0.63 |
17.58 |
| rRNA |
1DQH |
6!A:13!B |
C:G |
WC [cWW][XIX] |
10.6 |
53.96; 53.67 |
0.29 |
-9.02 |
0.34 |
17.57 |
| rRNA |
1DQH |
7!A:12!B |
C:G |
WC [cWW][XIX] |
10.62 |
54.67; 53.77 |
0.9 |
-5.74 |
0.05 |
10.09 |
| rRNA |
1DQH |
8!A:11!B |
U:A |
WC [cWW][XX] |
10.22 |
58.22; 57.65 |
0.57 |
-11.84 |
0.01 |
14.88 |
| rRNA |
1DQH |
9!A:10!B |
G:C |
WC [cWW][XIX] |
10.67 |
54.19; 54.2 |
0.01 |
-7.74 |
0.11 |
11.51 |