Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 1DRZ BPC Identified: 29 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
HDV_ribozyme 1DRZ 101!B:137!B G:U Wb [cWW][XXVIII] 10.68 44.79; 72.64 27.84 1.6 0.23 1.61
HDV_ribozyme 1DRZ 102!B:136!B G:C WC [cWW][XIX] 10.46 55.31; 56.85 1.54 2.22 0.51 9.45
HDV_ribozyme 1DRZ 103!B:135!B C:G WC [cWW][XIX] 10.59 58.23; 53.45 4.78 1.51 0.19 3.51
HDV_ribozyme 1DRZ 104!B:134!B C:G WC [cWW][XIX] 10.48 60.74; 56.12 4.62 -0.79 0.29 5.03
HDV_ribozyme 1DRZ 105!B:133!B G:C WC [cWW][XIX] 10.44 54.59; 60.35 5.76 -5.7 0.59 7.49
HDV_ribozyme 1DRZ 106!B:132!B G:C WC [cWW][XIX] 10.47 57.69; 53.44 4.24 -5.62 0.41 9.01
HDV_ribozyme 1DRZ 107!B:131!B C:G WC [cWW][XIX] 10.9 56.59; 54.45 2.14 -4.15 1.12 19.64
HDV_ribozyme 1DRZ 111!B:172!B G:C WC [cWW][XIX] 10.79 53.05; 57.96 4.91 -13.02 1.34 11.41
HDV_ribozyme 1DRZ 112!B:171!B U:A WC [cWW][XX] 10.6 56.62; 57.24 0.62 -11.37 0.77 12.94
HDV_ribozyme 1DRZ 113!B:170!B C:G WC [cWW][XIX] 10.47 59.83; 54.03 5.81 -9.31 0.74 10.27
HDV_ribozyme 1DRZ 114!B:169!B C:G WC [cWW][XIX] 10.54 58.3; 53.94 4.36 -6.68 0.41 11.68
HDV_ribozyme 1DRZ 115!B:168!B C:G WC [cWW][XIX] 10.83 55.3; 53.76 1.54 -1.33 0.21 8.52
HDV_ribozyme 1DRZ 116!B:167!B A:U WC [cWW][XX] 10.2 61.65; 65.55 3.9 6.88 0.46 13.84
HDV_ribozyme 1DRZ 117!B:130!B G:C WC [cWW][XIX] 10.82 51.09; 58.57 7.48 -17.21 0.3 23.0
HDV_ribozyme 1DRZ 118!B:129!B C:G WC [cWW][XIX] 10.48 54.98; 55.73 0.76 -22.53 0.38 33.28
HDV_ribozyme 1DRZ 119!B:165!B C:A rpS(sb:O2*-N3) [cSS][-] 5.95 157.69; 91.37 66.32 -50.51 0.33 21.84
HDV_ribozyme 1DRZ 119!B:128!B C:G WC [cWW][XIX] 10.69 53.71; 47.9 5.81 -22.51 0.61 21.72
HDV_ribozyme 1DRZ 121!B:142!B C:A pfS [cSW][-] 9.58 124.65; 30.5 94.15 -13.28 0.34 26.19
HDV_ribozyme 1DRZ 121!B:139!B C:G WC [cWW][XIX] 10.7 53.55; 52.36 1.19 -20.33 0.75 33.72
HDV_ribozyme 1DRZ 122!B:138!B C:G WC [cWW][XIX] 10.88 53.41; 59.91 6.5 -1.64 1.38 20.36
HDV_ribozyme 1DRZ 129!B:166!B G:A rS [tSS][-] 7.93 85.9; 61.56 24.34 154.83 1.08 43.33
HDV_ribozyme 1DRZ 140!B:142!B G:A pS_1 [cSH][-] 7.86 139.56; 26.75 112.82 -24.83 0.63 48.49
HDV_ribozyme 1DRZ 141!B:161!B C:G rH_1 [tWH][-] 11.4 23.64; 5.58 18.06 177.0 0.37 5.47
HDV_ribozyme 1DRZ 143!B:162!B A:G WC [cWW][VIII] 12.79 48.46; 50.47 2.01 -12.15 0.15 23.85
HDV_ribozyme 1DRZ 144!B:161!B C:G WC [cWW][XIX] 10.8 55.6; 54.51 1.09 -20.36 0.07 27.63
HDV_ribozyme 1DRZ 145!B:160!B A:U WC [cWW][XX] 10.52 56.82; 56.5 0.32 -8.36 0.44 10.57
HDV_ribozyme 1DRZ 146!B:159!B C:G WC [cWW][XIX] 10.5 55.22; 54.27 0.96 -6.1 0.39 9.83
HDV_ribozyme 1DRZ 147!B:158!B C:G WC [cWW][XIX] 10.56 55.09; 52.54 2.55 -4.53 0.0 5.81
HDV_ribozyme 1DRZ 155!B:156!B U:C pS [cSH][-] 6.89 136.31; 46.15 90.15 12.84 0.2 14.04