Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 1DUH BPC Identified: 42 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
SRP_RNA 1DUH 31!A:75!B C:G WC [cWW][XIX] 10.25 56.6; 51.71 4.9 -9.14 0.0 17.9
SRP_RNA 1DUH 32!A:74!B U:A WC [cWW][XX] 10.24 56.49; 55.26 1.22 -13.94 0.18 16.53
SRP_RNA 1DUH 33!A:73!B C:G WC [cWW][XIX] 10.45 56.34; 53.91 2.42 -7.89 0.17 9.94
SRP_RNA 1DUH 34!A:72!B U:A WC [cWW][XX] 10.11 60.52; 59.52 1.0 -1.15 0.17 6.13
SRP_RNA 1DUH 35!A:71!B G:C WC [cWW][XIX] 10.44 60.84; 58.01 2.83 -10.02 0.55 10.17
SRP_RNA 1DUH 36!A:70!B U:G Wb [cWW][XXVIII] 10.38 67.45; 46.46 21.0 -6.22 0.26 6.83
SRP_RNA 1DUH 37!A:69!B U:G Wb [cWW][XXVIII] 10.22 68.24; 44.85 23.39 -2.24 0.01 9.38
SRP_RNA 1DUH 38!A:68!B U:A WC [cWW][XX] 10.43 59.79; 54.51 5.28 -9.02 0.08 11.75
SRP_RNA 1DUH 43!A:66!B G:C WC [cWW][XIX] 10.6 50.7; 58.38 7.68 -0.31 0.13 1.89
SRP_RNA 1DUH 44!A:65!B G:C WC [cWW][XIX] 10.69 54.83; 53.36 1.47 -7.34 0.3 13.0
SRP_RNA 1DUH 45!A:64!B U:G Wb [cWW][XXVIII] 10.16 68.7; 45.13 23.57 -1.58 0.12 6.27
SRP_RNA 1DUH 46!A:63!B C:A S [tSH][-] 9.17 85.98; 8.01 77.97 -70.22 0.19 9.09
SRP_RNA 1DUH 47!A:62!B A:C rH_1 [rWH][XXV] 11.01 4.19; 25.95 21.76 151.3 0.02 2.33
SRP_RNA 1DUH 47!A:61!B A:G S(bp:N1-O2P)_2 [---][-] 12.27 36.0; 61.48 25.49 162.25 1.75 12.28
SRP_RNA 1DUH 48!A:61!B G:G S_1 [tSH][-] 11.27 8.68; 83.46 74.79 -35.85 0.06 10.2
SRP_RNA 1DUH 49!A:60!B G:A WC [cWW][VIII] 12.59 46.71; 51.97 5.26 -2.11 0.08 11.81
SRP_RNA 1DUH 50!A:59!B U:A WC [cWW][XX] 10.52 50.54; 57.29 6.75 -5.02 0.62 17.92
SRP_RNA 1DUH 51!A:58!B C:G WC [cWW][XIX] 10.56 51.38; 59.22 7.84 -3.49 0.35 9.53
SRP_RNA 1DUH 52!A:57!B C:G WC [cWW][XIX] 10.33 59.15; 52.47 6.68 -4.0 0.04 9.32
SRP_RNA 1DUH 53!A:56!B G:A S [tSH][XI] 9.69 92.35; 11.95 80.4 4.75 0.22 10.56
SRP_RNA 1DUH 54!A:55!B G:A S [tSH][XI] 8.61 107.49; 18.9 88.59 -18.98 0.26 20.78
SRP_RNA 1DUH 55!A:54!B A:G S [tSH][XI] 8.61 18.9; 107.49 88.59 -18.99 0.26 20.79
SRP_RNA 1DUH 56!A:53!B A:G S [tSH][XI] 9.69 11.97; 92.34 80.36 4.72 0.22 10.56
SRP_RNA 1DUH 57!A:52!B G:C WC [cWW][XIX] 10.33 52.47; 59.17 6.69 -4.0 0.04 9.31
SRP_RNA 1DUH 58!A:51!B G:C WC [cWW][XIX] 10.56 59.22; 51.36 7.85 -3.49 0.35 9.53
SRP_RNA 1DUH 59!A:50!B A:U WC [cWW][XX] 10.52 57.27; 50.55 6.72 -5.01 0.62 17.92
SRP_RNA 1DUH 60!A:49!B A:G WC [cWW][VIII] 12.59 51.97; 46.71 5.25 -2.11 0.08 11.81
SRP_RNA 1DUH 61!A:48!B G:G S_1 [tSH][-] 11.27 83.48; 8.68 74.8 -35.88 0.06 10.2
SRP_RNA 1DUH 61!A:47!B G:A S(bp:N1-O2P)_2 [---][-] 12.27 61.5; 35.98 25.52 162.24 1.75 12.28
SRP_RNA 1DUH 62!A:47!B C:A rH_1 [rWH][XXV] 11.01 25.96; 4.17 21.78 151.1 0.02 2.33
SRP_RNA 1DUH 63!A:46!B A:C S [tSH][-] 9.17 8.01; 86.0 77.99 -70.31 0.19 9.08
SRP_RNA 1DUH 64!A:45!B G:U Wb [cWW][XXVIII] 10.16 45.13; 68.71 23.58 -1.58 0.12 6.27
SRP_RNA 1DUH 65!A:44!B C:G WC [cWW][XIX] 10.69 53.37; 54.84 1.47 -7.35 0.3 13.0
SRP_RNA 1DUH 66!A:43!B C:G WC [cWW][XIX] 10.6 58.38; 50.7 7.67 -0.3 0.13 1.89
SRP_RNA 1DUH 68!A:38!B A:U WC [cWW][XX] 10.44 54.52; 59.8 5.28 -9.02 0.08 11.75
SRP_RNA 1DUH 69!A:37!B G:U Wb [cWW][XXVIII] 10.22 44.84; 68.23 23.4 -2.25 0.01 9.36
SRP_RNA 1DUH 70!A:36!B G:U Wb [cWW][XXVIII] 10.38 46.46; 67.45 20.99 -6.22 0.26 6.82
SRP_RNA 1DUH 71!A:35!B C:G WC [cWW][XIX] 10.44 58.01; 60.83 2.82 -10.03 0.55 10.18
SRP_RNA 1DUH 72!A:34!B A:U WC [cWW][XX] 10.11 59.52; 60.52 1.0 -1.15 0.17 6.13
SRP_RNA 1DUH 73!A:33!B G:C WC [cWW][XIX] 10.45 53.91; 56.34 2.43 -7.88 0.17 9.94
SRP_RNA 1DUH 74!A:32!B A:U WC [cWW][XX] 10.24 55.29; 56.47 1.19 -13.92 0.18 16.54
SRP_RNA 1DUH 75!A:31!B G:C WC [cWW][XIX] 10.25 51.72; 56.59 4.86 -9.13 0.0 17.89