Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 1DUL BPC Identified: 23 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
SRP_RNA 1DUL 130!B:178!B G:C WC [cWW][XIX] 10.64 51.89; 55.48 3.59 -9.33 0.84 10.06
SRP_RNA 1DUL 131!B:177!B G:C WC [cWW][XIX] 10.49 53.68; 57.5 3.82 -12.4 0.01 14.79
SRP_RNA 1DUL 132!B:176!B C:G WC [cWW][XIX] 10.57 56.24; 53.32 2.92 -10.23 0.13 15.6
SRP_RNA 1DUL 133!B:175!B U:A WC [cWW][XX] 10.42 55.68; 57.11 1.43 -10.53 0.12 15.1
SRP_RNA 1DUL 134!B:174!B C:G WC [cWW][XIX] 10.56 56.06; 53.42 2.63 -10.75 0.07 13.51
SRP_RNA 1DUL 135!B:173!B U:A WC [cWW][XX] 10.48 55.66; 55.91 0.25 -13.0 0.21 13.39
SRP_RNA 1DUL 136!B:172!B G:C WC [cWW][XIX] 10.72 53.43; 54.55 1.12 -12.5 0.01 14.89
SRP_RNA 1DUL 137!B:171!B U:G Wb [cWW][XXVIII] 10.33 67.94; 42.33 25.61 -13.66 0.61 17.43
SRP_RNA 1DUL 138!B:170!B U:G Wb [cWW][XXVIII] 10.37 67.38; 42.93 24.45 -14.4 0.11 22.73
SRP_RNA 1DUL 139!B:169!B U:A WC [cWW][XX] 10.69 55.41; 52.32 3.08 -6.74 0.09 8.65
SRP_RNA 1DUL 140!B:164!B A:A rS(sp:O2*-O1P) [---][-] 9.44 159.83; 120.46 39.37 92.7 0.59 65.37
SRP_RNA 1DUL 144!B:167!B G:C WC [cWW][XIX] 10.43 55.77; 58.54 2.77 -7.84 0.32 14.09
SRP_RNA 1DUL 145!B:166!B G:C WC [cWW][XIX] 10.66 55.03; 55.0 0.03 -11.36 0.96 23.12
SRP_RNA 1DUL 146!B:165!B U:G Wb [cWW][XXVIII] 10.77 64.04; 39.05 25.0 -9.28 0.02 13.05
SRP_RNA 1DUL 147!B:164!B C:A S [tSH][-] 9.73 83.38; 4.23 79.16 -86.18 0.09 9.87
SRP_RNA 1DUL 148!B:163!B A:C rH_1 [rWH][XXV] 11.05 6.58; 25.51 18.93 -164.25 0.44 16.1
SRP_RNA 1DUL 148!B:162!B A:G S(bp:N1-O2P)_2 [---][-] 12.09 36.99; 63.88 26.89 160.4 1.48 16.63
SRP_RNA 1DUL 149!B:162!B G:G S_1 [tSH][-] 11.63 9.97; 84.39 74.42 -23.98 0.21 10.01
SRP_RNA 1DUL 150!B:161!B G:A WC [cWW][VIII] 12.77 45.99; 49.86 3.87 -1.92 0.06 16.94
SRP_RNA 1DUL 151!B:160!B U:A WC [cWW][XX] 10.68 53.36; 54.08 0.72 -7.01 0.64 15.54
SRP_RNA 1DUL 152!B:159!B C:G WC [cWW][XIX] 10.57 56.11; 54.45 1.65 -4.91 0.21 12.49
SRP_RNA 1DUL 153!B:158!B C:G WC [cWW][XIX] 10.56 56.99; 53.3 3.69 1.5 0.15 5.65
SRP_RNA 1DUL 154!B:157!B G:A S [tSH][XI] 9.13 98.88; 12.43 86.45 -83.65 0.68 15.4