Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 1EC6
BPC Identified: 12
Ambiguities: 0
| RNA_aptamer |
1EC6 |
1!C:20!C |
G:C |
WC [cWW][XIX] |
10.6 |
52.27; 54.98 |
2.72 |
-6.18 |
0.09 |
9.22 |
| RNA_aptamer |
1EC6 |
2!C:19!C |
A:U |
WC [cWW][XX] |
10.34 |
54.26; 54.44 |
0.18 |
-10.17 |
0.02 |
15.29 |
| RNA_aptamer |
1EC6 |
3!C:18!C |
G:C |
WC [cWW][XIX] |
10.61 |
56.62; 50.89 |
5.73 |
-13.79 |
0.26 |
19.35 |
| RNA_aptamer |
1EC6 |
4!C:17!C |
G:C |
WC [cWW][XIX] |
10.27 |
57.97; 53.78 |
4.18 |
-16.73 |
1.0 |
32.78 |
| RNA_aptamer |
1EC6 |
5!C:16!C |
A:C |
Wb* [cWW][-] |
11.85 |
66.21; 39.09 |
27.11 |
-9.73 |
1.29 |
42.94 |
| RNA_aptamer |
1EC6 |
7!C:10!C |
C:G |
fS_1 [tSW][-] |
9.34 |
95.63; 24.99 |
70.64 |
-174.48 |
0.23 |
10.77 |
| RNA_aptamer |
1EC6 |
8!C:10!C |
U:G |
S(sb:O2*-N7)_2 [---][-] |
8.58 |
121.87; 27.76 |
94.11 |
30.57 |
1.44 |
36.36 |
| RNA_aptamer |
1EC6 |
1!D:20!D |
G:C |
WC [cWW][XIX] |
10.66 |
52.48; 57.12 |
4.65 |
-3.31 |
0.29 |
3.44 |
| RNA_aptamer |
1EC6 |
2!D:19!D |
A:U |
WC [cWW][XX] |
10.47 |
54.96; 54.94 |
0.01 |
-9.27 |
0.13 |
15.83 |
| RNA_aptamer |
1EC6 |
3!D:18!D |
G:C |
WC [cWW][XIX] |
10.7 |
52.74; 56.28 |
3.54 |
-16.78 |
0.04 |
20.28 |
| RNA_aptamer |
1EC6 |
4!D:17!D |
G:C |
WC [cWW][XIX] |
10.46 |
56.79; 50.54 |
6.24 |
-17.05 |
1.01 |
37.44 |
| RNA_aptamer |
1EC6 |
5!D:16!D |
A:C |
Wb* [cWW][-] |
11.59 |
67.72; 37.33 |
30.39 |
-9.03 |
1.62 |
47.3 |