Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 1EFW BPC Identified: 66 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
tRNA 1EFW 1!C:72!C G:C WC [cWW][XIX] 10.69 59.78; 50.68 9.09 27.51 0.39 31.78
tRNA 1EFW 2!C:71!C G:C Wb* [---][-] 10.51 66.05; 49.94 16.11 18.37 0.92 33.62
tRNA 1EFW 3!C:70!C A:U WC [cWW][XX] 10.37 55.41; 60.88 5.47 1.87 0.04 20.18
tRNA 1EFW 4!C:69!C G:U Wb [cWW][XXVIII] 9.96 50.35; 73.83 23.48 -6.96 0.14 10.62
tRNA 1EFW 5!C:68!C C:G WC [cWW][XIX] 9.96 63.35; 50.44 12.92 -16.73 0.18 27.02
tRNA 1EFW 6!C:67!C G:C WC [cWW][XIX] 9.91 56.2; 64.47 8.27 -5.99 0.91 4.54
tRNA 1EFW 7!C:66!C G:C WC [cWW][XIX] 10.82 51.18; 56.04 4.85 -0.52 0.22 5.53
tRNA 1EFW 8!C:14!C U:A rH_4SU [---][-] 9.12 36.13; 15.32 20.81 163.78 0.02 20.41
tRNA 1EFW 9!C:23!C A:A rS* [tHH][-] 10.83 12.08; 10.47 1.61 133.63 0.46 9.1
tRNA 1EFW 10!C:45!C G:G pS_2 [---][-] 8.26 50.61; 111.9 61.29 -6.94 1.0 8.35
tRNA 1EFW 10!C:25!C G:U Wb [cWW][XXVIII] 10.31 43.07; 68.96 25.89 -2.69 0.6 24.5
tRNA 1EFW 11!C:24!C U:A WC [cWW][XX] 9.9 59.79; 63.72 3.93 -20.1 0.34 25.08
tRNA 1EFW 12!C:23!C U:A WC [cWW][XX] 10.7 51.6; 50.79 0.81 -4.85 0.03 10.26
tRNA 1EFW 13!C:22!C C:G Wb [---][-] 10.29 65.2; 49.28 15.93 -2.3 0.29 20.78
tRNA 1EFW 14!C:21!C A:A pfS [cSW][-] 9.43 37.44; 125.0 87.56 0.68 0.22 12.19
tRNA 1EFW 15!C:48!C G:C rWb [tWW][XXII] 9.83 35.64; 69.34 33.7 -175.32 0.19 2.18
tRNA 1EFW 18!C:55!C G:U fS_PSU [---][-] 9.16 29.48; 110.87 81.39 -123.94 0.4 34.16
tRNA 1EFW 19!C:56!C G:C WC [cWW][XIX] 10.14 53.69; 54.43 0.74 -21.77 1.54 51.07
tRNA 1EFW 22!C:46!C G:G rH_1 [tWH][VII] 11.49 29.57; 28.0 1.57 170.67 0.11 5.45
tRNA 1EFW 26!C:44!C A:G WC [cWW][VIII] 12.56 47.97; 43.66 4.31 -12.53 0.45 28.48
tRNA 1EFW 27!C:43!C C:G WC [cWW][XIX] 10.43 54.32; 53.08 1.24 -14.9 1.3 34.86
tRNA 1EFW 28!C:42!C C:G WC [cWW][XIX] 10.4 59.54; 55.62 3.92 -0.38 0.32 11.14
tRNA 1EFW 29!C:41!C U:A WC [cWW][XX] 10.44 54.44; 54.75 0.31 -1.05 0.04 5.41
tRNA 1EFW 30!C:40!C G:C WC [cWW][XIX] 10.28 55.37; 57.64 2.27 2.94 0.38 10.11
tRNA 1EFW 31!C:39!C C:G WC [cWW][XIX] 10.15 59.09; 57.31 1.78 1.02 0.2 2.65
tRNA 1EFW 32!C:38!C C:C Wb [cWW][-] 10.17 72.17; 27.39 44.78 -0.94 0.08 12.49
tRNA 1EFW 49!C:65!C G:U Wb_PSU [---][-] 10.52 45.21; 80.52 35.31 -6.5 0.65 13.99
tRNA 1EFW 50!C:64!C C:G WC [cWW][XIX] 10.67 53.36; 54.73 1.37 -8.17 0.37 19.0
tRNA 1EFW 51!C:63!C G:C WC [cWW][XIX] 10.36 55.87; 58.78 2.91 -0.58 0.03 4.13
tRNA 1EFW 52!C:62!C G:C WC [cWW][XIX] 10.84 57.05; 45.93 11.12 -5.87 0.21 15.88
tRNA 1EFW 53!C:61!C G:C WC [cWW][XIX] 10.1 52.9; 60.31 7.42 1.67 0.24 9.3
tRNA 1EFW 54!C:58!C U:A rH_1 [tWH][XXIV] 9.68 31.94; 19.48 12.47 163.11 0.58 16.44
tRNA 1EFW 55!C:57!C U:G S_PSU(sb:O2*-N7) [---][-] 7.46 88.6; 38.55 50.05 -167.92 0.22 41.72
tRNA 1EFW 1!D:72!D G:C Wb [---][-] 10.07 45.43; 75.12 29.69 10.88 0.3 28.95
tRNA 1EFW 3!D:70!D A:U WC [cWW][XX] 9.68 63.04; 69.14 6.1 -10.46 0.11 17.28
tRNA 1EFW 3!D:69!D A:U WC [cWW][XX] 11.54 42.94; 49.37 6.43 14.25 0.77 11.04
tRNA 1EFW 4!D:69!D G:U Wb [cWW][XXVIII] 9.73 43.61; 73.19 29.58 -15.77 0.98 17.26
tRNA 1EFW 5!D:68!D C:G WC [cWW][XIX] 10.06 61.43; 59.77 1.66 -11.92 0.56 21.09
tRNA 1EFW 6!D:67!D G:C WC [cWW][XIX] 10.33 53.38; 65.32 11.94 -11.56 0.66 10.29
tRNA 1EFW 7!D:66!D G:C WC [cWW][XIX] 10.56 47.06; 54.09 7.03 -0.51 0.34 1.03
tRNA 1EFW 8!D:14!D U:A rH_4SU [---][-] 9.67 32.05; 18.48 13.58 160.21 0.97 22.75
tRNA 1EFW 9!D:23!D A:A rS* [tHH][-] 11.2 11.2; 14.12 2.92 121.82 0.45 12.59
tRNA 1EFW 10!D:45!D G:G pS_2 [---][-] 8.69 51.87; 112.36 60.5 -4.73 0.35 20.67
tRNA 1EFW 10!D:25!D G:U Wb [cWW][XXVIII] 9.95 40.37; 69.57 29.2 -1.98 0.11 21.41
tRNA 1EFW 11!D:24!D U:A WC [cWW][XX] 9.94 58.98; 59.26 0.28 -11.44 0.48 21.9
tRNA 1EFW 12!D:23!D U:A WC [cWW][XX] 10.32 57.66; 50.66 7.0 -9.48 0.21 13.42
tRNA 1EFW 13!D:22!D C:G WC [cWW][XIX] 10.51 61.6; 54.28 7.32 -1.16 0.04 1.86
tRNA 1EFW 14!D:21!D A:A pfS [cSW][-] 9.36 34.35; 125.0 90.65 6.73 0.55 17.86
tRNA 1EFW 15!D:48!D G:C rWb [tWW][XXII] 9.8 36.03; 72.48 36.45 171.72 0.14 7.33
tRNA 1EFW 18!D:55!D G:U fS_PSU [---][-] 8.64 26.81; 122.52 95.71 -130.09 0.44 20.68
tRNA 1EFW 19!D:56!D G:C WC [cWW][XIX] 10.52 56.2; 55.71 0.49 -22.51 0.3 24.19
tRNA 1EFW 22!D:46!D G:G rH_1 [tWH][VII] 11.18 30.43; 27.96 2.48 167.01 0.03 12.51
tRNA 1EFW 26!D:44!D A:G WC [cWW][VIII] 12.54 48.2; 51.88 3.68 -4.7 1.2 33.52
tRNA 1EFW 27!D:43!D C:G WC [cWW][XIX] 10.66 53.28; 58.77 5.49 -5.28 0.61 25.84
tRNA 1EFW 28!D:42!D C:G WC [cWW][XIX] 10.58 57.29; 58.96 1.67 -0.43 0.07 9.97
tRNA 1EFW 29!D:41!D U:A WC [cWW][XX] 10.27 58.39; 55.92 2.46 -0.37 0.07 7.53
tRNA 1EFW 30!D:40!D G:C WC [cWW][XIX] 10.38 56.03; 52.59 3.45 6.55 0.1 3.5
tRNA 1EFW 31!D:39!D C:G WC [cWW][XIX] 10.32 56.05; 54.24 1.82 -4.58 0.18 14.65
tRNA 1EFW 32!D:38!D C:C sWb [---][-] 10.06 77.98; 29.28 48.7 -9.13 0.46 10.9
tRNA 1EFW 49!D:65!D G:U Wb_PSU [---][-] 10.78 49.47; 79.76 30.29 6.15 0.21 6.57
tRNA 1EFW 50!D:64!D C:G WC [cWW][XIX] 10.46 51.62; 58.84 7.22 -8.78 0.39 17.27
tRNA 1EFW 51!D:63!D G:C WC [cWW][XIX] 10.14 53.19; 66.23 13.03 3.2 0.33 17.42
tRNA 1EFW 52!D:62!D G:C WC [cWW][XIX] 10.07 56.7; 59.1 2.4 -4.37 0.05 8.98
tRNA 1EFW 53!D:61!D G:C WC [cWW][XIX] 10.37 57.71; 57.61 0.1 -14.37 0.23 20.12
tRNA 1EFW 54!D:58!D U:A rH_1 [tWH][XXIV] 9.21 36.53; 19.8 16.73 166.88 0.06 19.58
tRNA 1EFW 55!D:57!D U:G S_PSU(sb:O2*-N7) [---][-] 6.65 90.41; 39.8 50.62 -178.7 2.09 25.16