Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 1EIY
BPC Identified: 28
Ambiguities: 0
| tRNA |
1EIY |
1!C:72!C |
G:C |
WC [cWW][XIX] |
10.72 |
47.71; 60.0 |
12.29 |
5.76 |
0.87 |
16.52 |
| tRNA |
1EIY |
2!C:71!C |
C:G |
Wb [---][-] |
10.03 |
65.59; 52.76 |
12.83 |
-4.59 |
0.69 |
4.78 |
| tRNA |
1EIY |
3!C:70!C |
C:G |
WC [cWW][XIX] |
10.29 |
62.63; 50.98 |
11.65 |
1.08 |
0.61 |
13.17 |
| tRNA |
1EIY |
4!C:69!C |
G:C |
WC [cWW][XIX] |
10.66 |
55.41; 54.79 |
0.62 |
4.12 |
1.21 |
10.65 |
| tRNA |
1EIY |
5!C:68!C |
A:U |
WC [cWW][XX] |
10.63 |
54.05; 60.41 |
6.36 |
-0.52 |
0.06 |
19.61 |
| tRNA |
1EIY |
6!C:67!C |
G:C |
WC [cWW][XIX] |
10.6 |
53.99; 51.29 |
2.7 |
-14.59 |
0.12 |
14.88 |
| tRNA |
1EIY |
7!C:66!C |
G:C |
WC [cWW][XIX] |
10.23 |
56.46; 53.63 |
2.83 |
-11.83 |
0.23 |
9.55 |
| tRNA |
1EIY |
8!C:14!C |
U:A |
rH_1 [tWH][XXIV] |
10.25 |
29.94; 15.03 |
14.91 |
166.47 |
0.11 |
10.72 |
| tRNA |
1EIY |
9!C:23!C |
A:A |
rS* [tHH][-] |
11.96 |
13.84; 3.58 |
10.26 |
101.27 |
0.95 |
10.23 |
| tRNA |
1EIY |
10!C:25!C |
G:C |
WC [cWW][XIX] |
10.53 |
52.05; 61.72 |
9.67 |
0.71 |
0.53 |
17.11 |
| tRNA |
1EIY |
11!C:24!C |
C:G |
WC [cWW][XIX] |
10.9 |
54.23; 52.45 |
1.79 |
-0.3 |
0.2 |
18.02 |
| tRNA |
1EIY |
12!C:23!C |
U:A |
WC [cWW][XX] |
10.83 |
48.4; 54.29 |
5.9 |
-9.43 |
0.08 |
11.5 |
| tRNA |
1EIY |
13!C:22!C |
C:G |
Wb [---][-] |
10.62 |
64.33; 48.02 |
16.31 |
-11.82 |
0.53 |
7.25 |
| tRNA |
1EIY |
18!C:55!C |
G:U |
fS_2 [---][-] |
8.85 |
35.07; 105.28 |
70.21 |
-177.23 |
0.56 |
11.28 |
| tRNA |
1EIY |
19!C:56!C |
G:C |
WC [cWW][XIX] |
10.22 |
69.59; 49.71 |
19.88 |
-8.06 |
0.85 |
7.72 |
| tRNA |
1EIY |
21!C:48!C |
A:C |
rS* [tHH][-] |
9.44 |
52.96; 22.5 |
30.46 |
-108.01 |
1.86 |
26.44 |
| tRNA |
1EIY |
22!C:46!C |
G:G |
rH_1 [tWH][VII] |
11.24 |
33.92; 34.2 |
0.28 |
172.55 |
1.52 |
6.56 |
| tRNA |
1EIY |
26!C:44!C |
A:G |
WC [cWW][VIII] |
12.62 |
46.98; 46.24 |
0.74 |
-30.87 |
0.95 |
27.08 |
| tRNA |
1EIY |
27!C:43!C |
U:A |
WC [cWW][XX] |
10.87 |
53.26; 50.08 |
3.18 |
-4.99 |
0.1 |
10.41 |
| tRNA |
1EIY |
28!C:42!C |
G:C |
WC [cWW][XIX] |
10.35 |
49.83; 61.01 |
11.18 |
1.94 |
0.37 |
8.53 |
| tRNA |
1EIY |
29!C:41!C |
C:G |
WC [cWW][XIX] |
10.65 |
55.17; 58.33 |
3.16 |
0.28 |
0.33 |
5.96 |
| tRNA |
1EIY |
30!C:40!C |
G:C |
WC [cWW][XIX] |
10.91 |
51.26; 53.0 |
1.74 |
10.07 |
0.29 |
23.34 |
| tRNA |
1EIY |
31!C:39!C |
A:U |
WC [cWW][XX] |
11.48 |
56.54; 46.37 |
10.17 |
11.23 |
0.25 |
13.52 |
| tRNA |
1EIY |
49!C:65!C |
C:G |
WC [cWW][XIX] |
10.28 |
56.04; 53.02 |
3.02 |
-13.51 |
0.12 |
16.43 |
| tRNA |
1EIY |
50!C:64!C |
G:C |
WC [cWW][XIX] |
11.34 |
55.14; 55.76 |
0.62 |
-8.13 |
0.49 |
9.22 |
| tRNA |
1EIY |
51!C:63!C |
C:G |
WC [cWW][XIX] |
11.01 |
53.26; 54.58 |
1.32 |
-9.76 |
0.18 |
21.56 |
| tRNA |
1EIY |
52!C:62!C |
G:C |
WC [cWW][XIX] |
11.0 |
52.5; 57.7 |
5.2 |
4.28 |
0.18 |
5.47 |
| tRNA |
1EIY |
53!C:61!C |
G:C |
WC [cWW][XIX] |
10.49 |
51.96; 59.0 |
7.03 |
10.3 |
0.57 |
18.27 |