Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 1F1T BPC Identified: 19 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
RNA_aptamer 1F1T 1!A:38!A G:C WC [cWW][XIX] 10.56 46.09; 55.73 9.63 -2.73 0.13 7.06
RNA_aptamer 1F1T 2!A:37!A G:C WC [cWW][XIX] 9.83 52.93; 59.05 6.12 -15.26 0.27 20.49
RNA_aptamer 1F1T 3!A:36!A A:U WC [cWW][XX] 10.23 57.86; 56.3 1.56 -11.25 0.2 14.63
RNA_aptamer 1F1T 4!A:35!A U:A WC [cWW][XX] 10.38 50.04; 56.75 6.71 0.86 0.42 14.33
RNA_aptamer 1F1T 5!A:34!A C:G WC [cWW][XIX] 10.28 56.71; 58.39 1.67 -1.02 0.14 17.16
RNA_aptamer 1F1T 6!A:33!A C:G WC [cWW][XIX] 10.56 56.85; 58.01 1.16 1.28 0.1 7.69
RNA_aptamer 1F1T 7!A:29!A C:G WC [cWW][XIX] 10.71 58.24; 54.53 3.71 -7.89 0.12 5.65
RNA_aptamer 1F1T 8!A:28!A G:C WC [cWW][XIX] 10.47 52.37; 60.67 8.3 0.85 0.05 4.21
RNA_aptamer 1F1T 10!A:23!A C:G WC [cWW][XIX] 10.58 52.4; 53.32 0.92 5.73 0.18 7.94
RNA_aptamer 1F1T 11!A:26!A U:A pfS [cSW][-] 9.27 128.13; 34.72 93.41 -0.98 0.14 7.76
RNA_aptamer 1F1T 11!A:22!A U:A WC [cWW][XX] 10.0 56.53; 55.27 1.26 -10.41 0.18 7.22
RNA_aptamer 1F1T 12!A:21!A G:C WC [cWW][XIX] 10.3 53.6; 55.2 1.6 -11.82 0.06 15.15
RNA_aptamer 1F1T 13!A:20!A G:C WC [cWW][XIX] 10.08 58.73; 59.38 0.65 -6.43 0.23 11.95
RNA_aptamer 1F1T 14!A:19!A C:G WC [cWW][XIX] 10.9 56.17; 49.76 6.4 2.84 0.29 1.16
RNA_aptamer 1F1T 15!A:18!A G:A S [tSH][XI] 9.87 91.28; 7.85 83.43 177.92 0.45 9.96
RNA_aptamer 1F1T 23!A:27!A G:A fS [tSW][X] 9.26 117.21; 4.99 112.21 -130.44 0.03 2.42
RNA_aptamer 1F1T 24!A:29!A G:G rH_1 [tWH][VII] 10.84 28.76; 37.79 9.03 -129.88 0.04 15.41
RNA_aptamer 1F1T 25!A:27!A U:A S(sb:O2*-N7) [---][-] 6.54 81.76; 34.89 46.87 -172.63 0.49 41.86
RNA_aptamer 1F1T 29!A:31!A G:A fS [tSW][X] 9.7 114.67; 11.81 102.86 103.96 0.36 28.11