Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 1F27 BPC Identified: 15 Ambiguities: 1
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
RNA_aptamer 1F27 3!A:20!A A:U WC [cWW][XX] 10.59 54.39; 53.79 0.59 -10.14 0.27 13.08
RNA_aptamer 1F27 4!A:23!B C:A fS(sb:O2*-N1)_1 [tSS][-] 8.33 89.41; 57.24 32.17 153.37 2.33 47.56
RNA_aptamer 1F27 4!A:19!A C:G WC [cWW][XIX] 10.43 57.21; 56.52 0.69 -15.97 0.55 22.67
RNA_aptamer 1F27 5!A:18!A C:G WC [cWW][XIX] 10.62 54.29; 55.24 0.95 -10.36 0.13 13.71
RNA_aptamer 1F27 6!A:17!A G:C WC [cWW][XIX] 10.62 55.3; 53.9 1.39 -3.74 0.09 6.14
RNA_aptamer 1F27 7!A:16!A U:A WC [cWW][XX] 9.98 63.7; 58.57 5.14 12.12 0.62 22.32
RNA_aptamer 1F27 10!A:32!B G:C WC [cWW][XIX] 10.45 55.46; 58.09 2.63 -6.43 0.25 10.93
RNA_aptamer 1F27 11!A:31!B A:U WC [cWW][XX] 10.36 51.64; 56.79 5.15 -14.74 0.21 12.06
RNA_aptamer 1F27 12!A:30!B G:C WC [cWW][XIX] 10.52 56.5; 54.94 1.56 -12.05 0.06 13.41
RNA_aptamer 1F27 13!A:29!B G:C WC [cWW][XIX] 10.64 54.33; 55.4 1.07 -12.16 0.49 19.45
RNA_aptamer 1F27 14!A:28!B A:U WC [cWW][XX] 10.54 54.49; 55.41 0.92 -12.77 0.33 15.01
RNA_aptamer 1F27 15!A:27!B C:G WC [cWW][XIX] 10.46 57.68; 56.5 1.17 -2.94 0.62 14.75
RNA_aptamer 1F27 17!A:26!B C:A pfS [cSW][-] 8.86 130.79; 39.81 90.99 35.48 0.14 22.45
RNA_aptamer 1F27 18!A:24!B G:A S(bp:N2-O2P)_2 [---][-] 8.21 132.44; 29.02 103.42 119.43 2.04 18.72
RNA_aptamer 1F27 19!A:23!B G:A rpS [cSS][-] 5.63 108.97; 146.99 38.01 -35.4 0.02 27.85