Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 1FFY BPC Identified: 34 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
tRNA 1FFY 1!T:72!T G:C WC [cWW][XIX] 10.73 54.58; 54.3 0.29 -4.16 0.06 11.74
tRNA 1FFY 2!T:71!T G:C WC [cWW][XIX] 10.46 56.07; 60.29 4.22 -8.27 0.34 6.7
tRNA 1FFY 3!T:70!T G:C WC [cWW][XIX] 10.66 53.29; 56.92 3.63 -4.35 0.09 7.6
tRNA 1FFY 4!T:69!T C:G WC [cWW][XIX] 10.46 59.8; 58.03 1.77 3.38 0.17 16.31
tRNA 1FFY 5!T:68!T U:G Wb [cWW][XXVIII] 10.4 68.9; 43.41 25.49 -11.64 0.35 15.25
tRNA 1FFY 6!T:67!T U:A WC [cWW][XX] 10.47 59.01; 56.91 2.09 -8.55 0.16 11.27
tRNA 1FFY 7!T:66!T G:C WC [cWW][XIX] 10.59 51.71; 53.15 1.44 -9.83 0.11 7.53
tRNA 1FFY 8!T:21A!T U:A fS(sb:O2*-N1) [tSW][-] 8.3 103.25; 55.19 48.06 145.89 0.58 30.44
tRNA 1FFY 8!T:14!T U:A rH_1 [tWH][XXIV] 9.93 35.08; 17.62 17.45 156.47 0.46 13.17
tRNA 1FFY 9!T:23!T A:A rS* [tHH][-] 11.51 3.34; 9.73 6.39 109.75 0.84 18.29
tRNA 1FFY 10!T:25!T G:C WC [cWW][XIX] 10.64 51.11; 54.54 3.42 -7.04 0.63 17.85
tRNA 1FFY 11!T:24!T C:G WC [cWW][XIX] 10.64 54.95; 54.49 0.46 -3.65 0.64 17.19
tRNA 1FFY 12!T:23!T U:A WC [cWW][XX] 10.79 53.25; 54.87 1.62 -5.94 0.05 4.32
tRNA 1FFY 13!T:22!T C:G WC [cWW][XIX] 10.64 57.79; 52.68 5.11 -1.67 0.25 8.13
tRNA 1FFY 14!T:21A!T A:A pfS [cSW][-] 10.35 31.58; 112.43 80.86 -16.93 0.35 20.22
tRNA 1FFY 15!T:48!T G:C rWb [tWW][XXII] 10.26 36.15; 60.77 24.61 166.13 0.04 5.59
tRNA 1FFY 18!T:55!T G:U fS_1 [tSW][-] 9.29 25.68; 101.54 75.86 -167.38 1.09 28.88
tRNA 1FFY 19!T:56!T G:C WC [cWW][XIX] 10.34 57.7; 52.88 4.82 -9.02 0.79 21.89
tRNA 1FFY 22!T:46!T G:G rH_1 [tWH][VII] 11.14 25.87; 36.12 10.25 165.18 0.59 11.94
tRNA 1FFY 26!T:44!T G:A WC [cWW][VIII] 12.56 41.91; 48.5 6.59 -22.12 0.64 35.73
tRNA 1FFY 27!T:43!T C:G WC [cWW][XIX] 10.63 52.39; 56.95 4.56 -18.44 0.6 27.22
tRNA 1FFY 28!T:42!T A:U WC [cWW][XX] 10.49 53.01; 54.88 1.86 -16.65 0.21 19.01
tRNA 1FFY 29!T:41!T C:G WC [cWW][XIX] 10.62 59.46; 53.6 5.86 -4.92 0.44 17.49
tRNA 1FFY 30!T:40!T C:G WC [cWW][XIX] 10.74 59.89; 51.0 8.89 -2.49 0.46 14.88
tRNA 1FFY 31!T:39!T C:G WC [cWW][XIX] 10.64 55.55; 53.1 2.45 3.03 0.11 5.3
tRNA 1FFY 32!T:38!T C:A sWb [---][-] 11.21 71.45; 26.82 44.63 21.18 0.26 12.52
tRNA 1FFY 33!T:36!T U:U pfS_2 [---][-] 7.12 106.62; 25.92 80.7 -141.97 0.18 19.95
tRNA 1FFY 49!T:65!T G:U Wb [cWW][XXVIII] 10.36 41.89; 71.39 29.5 -6.43 0.13 10.22
tRNA 1FFY 50!T:64!T G:C Wb [---][-] 10.68 51.33; 64.32 12.99 -7.53 0.48 13.64
tRNA 1FFY 51!T:63!T U:A WC [cWW][XX] 10.45 52.11; 58.71 6.6 -5.24 0.01 7.24
tRNA 1FFY 52!T:62!T G:C WC [cWW][XIX] 10.6 54.15; 54.28 0.12 -6.29 0.02 9.28
tRNA 1FFY 53!T:61!T G:C WC [cWW][XIX] 10.61 51.28; 55.74 4.47 -6.45 0.29 8.66
tRNA 1FFY 54!T:58!T U:A rH_1 [tWH][XXIV] 10.25 31.25; 8.59 22.66 -175.84 0.01 10.93
tRNA 1FFY 55!T:57!T U:A S(sb:O2*-N7) [---][-] 6.62 80.29; 39.7 40.58 -170.04 1.48 32.87