Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 1FUF
BPC Identified: 14
Ambiguities: 0
| dsRNA |
1FUF |
1!A:28!B |
G:C |
WC [cWW][XIX] |
10.69 |
52.48; 57.08 |
4.6 |
-1.58 |
0.18 |
7.26 |
| dsRNA |
1FUF |
2!A:27!B |
G:C |
WC [cWW][XIX] |
10.53 |
54.03; 54.58 |
0.55 |
-10.61 |
0.15 |
14.77 |
| dsRNA |
1FUF |
3!A:26!B |
U:A |
WC [cWW][XX] |
10.42 |
56.73; 59.8 |
3.07 |
-9.94 |
0.06 |
10.96 |
| dsRNA |
1FUF |
4!A:25!B |
A:U |
WC [cWW][XX] |
10.4 |
57.19; 56.92 |
0.28 |
-15.26 |
0.12 |
16.18 |
| dsRNA |
1FUF |
4!A:20!B |
A:U |
rH_1 [tWH][XXIV] |
9.77 |
18.34; 30.44 |
12.1 |
-158.84 |
0.11 |
7.67 |
| dsRNA |
1FUF |
5!A:24!B |
U:G |
Wb [cWW][XXVIII] |
10.5 |
67.26; 40.74 |
26.51 |
-6.64 |
0.22 |
9.43 |
| dsRNA |
1FUF |
6!A:18!B |
U:A |
rH_1 [tWH][XXIV] |
9.77 |
30.16; 17.94 |
12.22 |
-160.83 |
0.04 |
6.51 |
| dsRNA |
1FUF |
8!A:23!B |
C:G |
WC [cWW][XIX] |
10.5 |
57.03; 58.67 |
1.64 |
10.0 |
0.21 |
1.4 |
| dsRNA |
1FUF |
9!A:22!B |
G:C |
WC [cWW][XIX] |
10.5 |
56.85; 58.0 |
1.16 |
9.11 |
0.29 |
0.89 |
| dsRNA |
1FUF |
10!A:19!B |
G:U |
Wb [cWW][XXVIII] |
10.4 |
42.7; 68.46 |
25.75 |
-7.02 |
0.14 |
9.13 |
| dsRNA |
1FUF |
11!A:18!B |
U:A |
WC [cWW][XX] |
10.42 |
56.98; 58.6 |
1.62 |
-10.62 |
0.01 |
14.89 |
| dsRNA |
1FUF |
12!A:17!B |
A:U |
WC [cWW][XX] |
10.36 |
57.37; 57.94 |
0.57 |
-11.31 |
0.13 |
11.3 |
| dsRNA |
1FUF |
13!A:16!B |
C:G |
WC [cWW][XIX] |
10.69 |
53.78; 55.0 |
1.22 |
-3.94 |
0.24 |
15.56 |
| dsRNA |
1FUF |
14!A:15!B |
C:G |
WC [cWW][XIX] |
10.72 |
56.28; 52.28 |
4.0 |
0.24 |
0.12 |
6.86 |