Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 1GAX BPC Identified: 65 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
tRNA 1GAX 901!C:971!C G:C Wb [---][-] 10.69 50.26; 63.41 13.15 -1.29 0.95 14.41
tRNA 1GAX 902!C:970!C G:C Wb [---][-] 10.58 41.73; 58.09 16.37 -7.27 0.5 11.92
tRNA 1GAX 903!C:969!C G:C WC [cWW][XIX] 10.78 48.77; 54.12 5.35 -11.78 0.14 18.05
tRNA 1GAX 904!C:968!C C:G WC [cWW][XIX] 10.41 56.42; 55.09 1.33 -5.55 0.54 23.58
tRNA 1GAX 905!C:967!C G:C WC [cWW][XIX] 10.38 57.51; 56.17 1.35 0.06 0.19 18.2
tRNA 1GAX 906!C:966!C G:C WC [cWW][XIX] 11.07 55.31; 46.87 8.44 -5.87 0.58 28.21
tRNA 1GAX 907!C:965!C C:G Wb [---][-] 10.2 68.84; 52.59 16.25 -12.33 0.15 39.62
tRNA 1GAX 908!C:914!C U:A rH_1 [tWH][XXIV] 9.54 29.96; 22.54 7.42 179.16 0.08 16.65
tRNA 1GAX 909!C:922!C A:A rS* [tHH][-] 10.57 13.68; 15.82 2.14 122.96 0.12 14.77
tRNA 1GAX 910!C:944!C G:G pS_1 [cSH][-] 8.13 51.06; 128.12 77.06 -9.17 0.85 23.35
tRNA 1GAX 910!C:924!C G:C Wb [---][-] 10.9 43.38; 57.07 13.69 -6.58 0.01 4.25
tRNA 1GAX 911!C:923!C C:G WC [cWW][XIX] 10.36 60.15; 53.09 7.06 -12.46 0.04 16.02
tRNA 1GAX 912!C:922!C U:A WC [cWW][XX] 10.72 51.59; 52.25 0.66 -12.37 0.28 23.74
tRNA 1GAX 913!C:921!C C:G WC [cWW][XIX] 10.62 52.48; 50.4 2.09 -1.4 0.23 1.71
tRNA 1GAX 915!C:947!C G:C rWb [tWW][XXII] 10.41 33.63; 61.58 27.95 177.5 0.11 13.99
tRNA 1GAX 917!C:954!C G:U fS_1 [tSW][-] 9.23 24.95; 103.71 78.76 -163.75 0.43 16.5
tRNA 1GAX 918!C:955!C G:C WC [cWW][XIX] 10.41 59.21; 49.9 9.31 -30.01 1.4 53.95
tRNA 1GAX 919!C:920!C A:A rS(sp:O2*-O1P) [---][-] 9.06 115.91; 130.57 14.66 -123.29 1.07 39.51
tRNA 1GAX 921!C:945!C G:G rH_1 [tWH][VII] 10.78 34.69; 36.09 1.4 173.72 0.26 9.65
tRNA 1GAX 925!C:943!C G:A WC [cWW][VIII] 12.2 45.93; 52.36 6.42 -17.55 0.85 44.53
tRNA 1GAX 926!C:942!C C:G WC [cWW][XIX] 10.52 53.86; 49.75 4.12 -15.46 0.9 29.62
tRNA 1GAX 927!C:941!C U:A WC [cWW][XX] 10.34 54.19; 56.14 1.96 -6.56 0.05 16.27
tRNA 1GAX 928!C:940!C C:G WC [cWW][XIX] 10.66 53.72; 53.91 0.19 -4.69 0.0 7.43
tRNA 1GAX 929!C:939!C G:C WC [cWW][XIX] 10.31 55.09; 58.7 3.62 -4.85 0.23 11.08
tRNA 1GAX 930!C:938!C C:G WC [cWW][XIX] 10.55 56.6; 53.51 3.1 -7.47 0.22 8.37
tRNA 1GAX 948!C:964!C G:C WC [cWW][XIX] 10.36 56.13; 61.56 5.43 -4.61 0.54 13.05
tRNA 1GAX 949!C:963!C U:A WC [cWW][XX] 10.52 55.78; 54.11 1.67 -1.33 0.02 2.4
tRNA 1GAX 950!C:962!C A:U WC [cWW][XX] 10.23 56.02; 60.85 4.83 -1.87 0.15 8.82
tRNA 1GAX 951!C:961!C G:C WC [cWW][XIX] 10.57 55.03; 51.65 3.38 -1.46 0.19 10.57
tRNA 1GAX 952!C:960!C G:C WC [cWW][XIX] 11.04 45.53; 55.34 9.81 1.33 0.48 15.04
tRNA 1GAX 953!C:957!C U:A rH_1 [tWH][XXIV] 10.05 32.71; 18.21 14.51 153.93 0.24 11.63
tRNA 1GAX 954!C:956!C U:A S(sb:O2*-N7) [---][-] 6.99 81.54; 39.97 41.56 -173.67 1.98 21.59
tRNA 1GAX 901!D:971!D G:C WC [cWW][XIX] 10.18 55.0; 63.51 8.51 -2.7 1.61 20.63
tRNA 1GAX 902!D:970!D G:C Wb [---][-] 10.65 40.62; 62.22 21.59 -7.19 0.4 9.94
tRNA 1GAX 903!D:969!D G:C WC [cWW][XIX] 10.82 44.28; 49.47 5.19 -12.08 0.3 20.0
tRNA 1GAX 904!D:968!D C:G WC [cWW][XIX] 10.57 52.06; 55.99 3.93 -5.76 0.32 16.56
tRNA 1GAX 905!D:967!D G:C WC [cWW][XIX] 10.5 56.03; 53.95 2.08 -3.39 0.12 6.81
tRNA 1GAX 906!D:966!D G:C WC [cWW][XIX] 10.9 54.23; 48.97 5.26 -10.93 0.19 25.99
tRNA 1GAX 907!D:965!D C:G Wb [---][-] 10.32 68.83; 49.6 19.22 -10.38 0.54 40.93
tRNA 1GAX 908!D:945!D U:G rS(sb:O2*-N3) [---][-] 6.8 147.08; 86.37 60.71 -69.99 2.67 14.91
tRNA 1GAX 908!D:914!D U:A rH_1 [tWH][XXIV] 9.48 30.38; 20.57 9.81 -178.51 0.55 18.33
tRNA 1GAX 909!D:922!D A:A rS* [tHH][-] 10.85 13.93; 14.26 0.33 107.16 0.63 17.19
tRNA 1GAX 910!D:944!D G:G pS_1 [cSH][-] 8.18 49.33; 129.35 80.03 -7.04 0.66 27.78
tRNA 1GAX 910!D:924!D G:C WC [cWW][XIX] 10.86 47.23; 57.04 9.81 -7.02 0.12 8.3
tRNA 1GAX 911!D:923!D C:G WC [cWW][XIX] 10.54 57.76; 54.78 2.98 -12.52 0.05 16.75
tRNA 1GAX 912!D:922!D U:A WC [cWW][XX] 10.71 51.59; 52.65 1.06 -9.11 0.25 22.56
tRNA 1GAX 913!D:921!D C:G WC [cWW][XIX] 10.63 51.58; 51.44 0.14 -3.56 0.69 1.73
tRNA 1GAX 915!D:947!D G:C rWb [tWW][XXII] 10.37 37.32; 58.94 21.62 167.21 0.55 16.54
tRNA 1GAX 917!D:954!D G:U fS_1 [tSW][-] 9.22 33.3; 94.37 61.07 173.7 0.79 33.01
tRNA 1GAX 918!D:955!D G:C WC [cWW][XIX] 10.32 68.35; 54.08 14.27 -20.45 1.71 47.94
tRNA 1GAX 919!D:920!D A:A rS(sp:O2*-O1P) [---][-] 9.05 118.92; 126.72 7.8 -119.26 0.28 40.92
tRNA 1GAX 921!D:945!D G:G rH_1 [tWH][VII] 11.1 32.0; 33.43 1.43 -177.69 0.02 7.56
tRNA 1GAX 925!D:943!D G:A WC [cWW][VIII] 12.24 48.57; 54.7 6.13 -14.8 1.04 45.04
tRNA 1GAX 926!D:942!D C:G WC [cWW][XIX] 10.69 54.2; 50.89 3.31 -15.1 0.81 34.24
tRNA 1GAX 927!D:941!D U:A WC [cWW][XX] 10.38 51.7; 58.88 7.17 -5.59 0.21 13.21
tRNA 1GAX 928!D:940!D C:G WC [cWW][XIX] 10.54 57.0; 54.32 2.68 0.81 0.09 14.11
tRNA 1GAX 929!D:939!D G:C WC [cWW][XIX] 10.45 57.44; 59.54 2.09 -1.0 0.2 8.32
tRNA 1GAX 930!D:938!D C:G WC [cWW][XIX] 10.92 53.19; 55.06 1.87 0.56 0.0 1.99
tRNA 1GAX 948!D:964!D G:C WC [cWW][XIX] 10.07 51.45; 64.87 13.41 -9.22 0.18 17.22
tRNA 1GAX 949!D:963!D U:A WC [cWW][XX] 10.72 55.56; 53.3 2.27 -4.37 0.02 10.42
tRNA 1GAX 950!D:962!D A:U WC [cWW][XX] 10.45 60.49; 54.95 5.54 3.63 0.08 4.1
tRNA 1GAX 951!D:961!D G:C WC [cWW][XIX] 10.66 56.26; 52.11 4.15 -4.19 0.11 7.58
tRNA 1GAX 952!D:960!D G:C WC [cWW][XIX] 11.03 44.31; 51.72 7.41 -0.5 0.46 19.55
tRNA 1GAX 953!D:957!D U:A rH_1 [tWH][XXIV] 9.15 38.49; 21.49 16.99 171.88 0.81 17.31
tRNA 1GAX 954!D:956!D U:A S(sb:O2*-N7) [---][-] 7.18 78.41; 41.52 36.9 171.5 1.5 33.79