Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 1H3E BPC Identified: 38 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
tRNA 1H3E 1!B:72!B G:C WC [cWW][XIX] 10.73 53.21; 52.96 0.25 -12.2 0.27 20.29
tRNA 1H3E 2!B:71!B G:C WC [cWW][XIX] 10.49 58.12; 55.98 2.14 -2.35 0.39 20.5
tRNA 1H3E 3!B:70!B G:C WC [cWW][XIX] 10.61 54.22; 53.72 0.5 -4.7 0.26 11.61
tRNA 1H3E 4!B:69!B C:G WC [cWW][XIX] 10.7 53.81; 51.58 2.24 -8.04 0.46 15.04
tRNA 1H3E 5!B:68!B A:U WC [cWW][XX] 10.73 52.44; 54.11 1.67 -9.34 0.09 12.66
tRNA 1H3E 6!B:67!B G:C WC [cWW][XIX] 10.58 50.85; 56.92 6.07 -6.53 0.21 8.94
tRNA 1H3E 7!B:66!B G:C WC [cWW][XIX] 10.78 54.7; 52.38 2.32 4.16 0.14 8.96
tRNA 1H3E 8!B:21!B U:A fS(sb:O2*-N1) [tSW][-] 8.47 96.79; 63.2 33.59 155.27 0.02 22.25
tRNA 1H3E 8!B:14!B U:A rH_1 [tWH][XXIV] 9.45 36.79; 16.84 19.95 143.83 0.35 18.69
tRNA 1H3E 10!B:25!B C:G WC [cWW][XIX] 10.57 54.24; 53.17 1.07 -5.22 0.16 15.66
tRNA 1H3E 11!B:24!B C:G WC [cWW][XIX] 10.56 55.3; 54.22 1.08 2.58 0.14 7.58
tRNA 1H3E 12!B:23!B C:G WC [cWW][XIX] 10.66 56.91; 51.71 5.2 1.67 0.14 3.74
tRNA 1H3E 13!B:22!B G:A S [tSH][XI] 9.69 99.9; 13.19 86.71 16.47 0.61 2.67
tRNA 1H3E 14!B:21!B A:A pfS [cSW][-] 9.21 38.13; 126.04 87.91 -6.94 0.2 7.94
tRNA 1H3E 15!B:48!B G:C rWb [tWW][XXII] 10.23 36.24; 66.45 30.21 -158.68 0.59 18.48
tRNA 1H3E 15!B:20A G:C fS*_1 [tWS][-] 8.87 99.32; 10.05 89.26 -122.78 0.95 29.19
tRNA 1H3E 18!B:55!B G:U fS_PSU [---][-] 9.99 36.03; 106.13 70.1 -161.77 0.08 10.9
tRNA 1H3E 19!B:56!B G:C WC [cWW][XIX] 10.73 55.15; 50.08 5.07 -9.29 1.05 29.78
tRNA 1H3E 20A:59!B C:A H_1 [---][-] 7.95 63.11; 30.46 32.65 96.03 2.68 15.8
tRNA 1H3E 20A:48!B C:C rWC_o [tWW][XV] 10.58 70.54; 16.99 53.54 165.45 0.21 16.19
tRNA 1H3E 20!B:47H!B A:U rH_1 [tWH][XXIV] 10.08 6.67; 34.73 28.06 118.42 0.1 15.34
tRNA 1H3E 21!B:47I!B A:U S [tSH][-] 10.0 6.2; 70.57 64.36 -110.25 1.2 53.35
tRNA 1H3E 26!B:44!B G:U Wb [cWW][XXVIII] 10.28 37.48; 70.01 32.52 -11.64 0.23 12.58
tRNA 1H3E 27!B:43!B A:U WC [cWW][XX] 10.14 55.69; 58.62 2.92 -16.27 0.45 26.21
tRNA 1H3E 28!B:42!B C:G WC [cWW][XIX] 10.54 56.44; 52.88 3.56 -14.15 0.43 20.66
tRNA 1H3E 29!B:41!B G:C WC [cWW][XIX] 10.53 54.65; 57.48 2.83 -2.14 0.1 6.58
tRNA 1H3E 30!B:40!B G:C WC [cWW][XIX] 10.13 59.13; 59.69 0.56 -3.39 0.03 36.67
tRNA 1H3E 31!B:39!B U:A WC [cWW][XX] 10.42 56.53; 54.09 2.44 -4.37 0.26 14.6
tRNA 1H3E 32!B:38!B C:A sWb [---][-] 10.4 79.8; 29.69 50.12 -0.02 0.7 29.01
tRNA 1H3E 45!B:47G!B G:C WC [cWW][XIX] 10.47 57.68; 55.71 1.97 -0.83 0.67 29.9
tRNA 1H3E 46!B:47F!B G:C WC [cWW][XIX] 10.74 56.04; 54.75 1.29 7.6 0.21 10.44
tRNA 1H3E 47!B:47E!B C:G WC [cWW][XIX] 10.46 59.38; 54.7 4.68 12.19 0.52 27.45
tRNA 1H3E 49!B:65!B G:C WC [cWW][XIX] 10.77 54.04; 56.6 2.55 -4.85 0.4 13.2
tRNA 1H3E 50!B:64!B C:G WC [cWW][XIX] 10.55 58.34; 55.6 2.74 -8.34 0.1 12.06
tRNA 1H3E 51!B:63!B U:A WC [cWW][XX] 10.3 58.26; 59.24 0.98 -8.62 0.13 12.94
tRNA 1H3E 52!B:62!B G:C WC [cWW][XIX] 10.6 54.88; 54.97 0.08 -3.84 0.03 8.42
tRNA 1H3E 53!B:61!B G:C WC [cWW][XIX] 10.39 60.11; 55.71 4.4 -8.08 0.58 22.92
tRNA 1H3E 54!B:58!B U:A rH_1 [tWH][XXIV] 9.26 28.9; 28.57 0.33 152.89 0.1 15.65