Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 1H4Q BPC Identified: 30 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
tRNA 1H4Q 4!T:69!T G:C WC [cWW][XIX] 10.84 52.34; 51.17 1.17 -9.41 0.07 14.95
tRNA 1H4Q 5!T:68!T G:C WC [cWW][XIX] 10.83 51.63; 52.26 0.63 -2.84 0.04 9.56
tRNA 1H4Q 6!T:67!T A:U WC [cWW][XX] 10.32 56.47; 57.39 0.92 -3.59 0.17 3.93
tRNA 1H4Q 7!T:66!T G:C WC [cWW][XIX] 10.61 56.82; 55.53 1.28 -1.28 0.19 3.25
tRNA 1H4Q 8!T:21!T U:A fS(sb:O2*-N1) [tSW][-] 8.72 106.81; 49.67 57.14 160.66 0.2 18.05
tRNA 1H4Q 8!T:14!T U:A rH_1 [tWH][XXIV] 9.69 30.62; 13.54 17.09 167.53 0.23 8.47
tRNA 1H4Q 9!T:23!T A:C rS* [tHH][-] 11.29 34.82; 10.14 24.67 114.03 0.69 16.54
tRNA 1H4Q 10!T:45!T G:G H_3 [---][-] 10.24 39.07; 98.66 59.59 0.13 0.88 25.61
tRNA 1H4Q 10!T:25!T G:C WC [cWW][XIX] 10.25 55.2; 59.42 4.22 1.67 0.06 4.79
tRNA 1H4Q 11!T:24!T C:G WC [cWW][XIX] 10.4 54.28; 55.56 1.28 -4.33 0.35 9.85
tRNA 1H4Q 12!T:23!T G:C WC [cWW][XIX] 10.4 54.74; 56.34 1.6 -7.47 0.27 16.77
tRNA 1H4Q 13!T:22!T C:G WC [cWW][XIX] 10.44 55.54; 55.64 0.1 -11.53 0.17 10.58
tRNA 1H4Q 15!T:48!T G:C rWb [tWW][XXII] 10.42 36.09; 59.97 23.87 177.21 0.03 4.42
tRNA 1H4Q 18!T:55!T G:U fS_PSU [---][-] 8.8 28.67; 123.31 94.63 -160.35 0.35 14.8
tRNA 1H4Q 19!T:56!T G:C WC [cWW][XIX] 10.18 60.0; 54.74 5.26 -20.29 1.58 44.12
tRNA 1H4Q 19!T:20!T G:U pS* [cHS][-] 6.16 151.34; 50.68 100.66 15.59 0.0 8.99
tRNA 1H4Q 22!T:46!T G:G rH_1 [tWH][VII] 11.09 29.48; 32.33 2.85 165.62 0.37 13.23
tRNA 1H4Q 26!T:44!T A:G WC [cWW][VIII] 12.28 47.69; 50.73 3.04 -13.4 1.68 44.78
tRNA 1H4Q 27!T:43!T C:G WC [cWW][XIX] 10.39 55.72; 55.1 0.62 -14.08 1.26 37.94
tRNA 1H4Q 28!T:42!T C:G WC [cWW][XIX] 10.72 56.56; 54.22 2.34 -12.16 0.01 14.59
tRNA 1H4Q 29!T:41!T U:A WC [cWW][XX] 10.51 55.67; 54.7 0.98 -7.64 0.44 18.61
tRNA 1H4Q 30!T:40!T C:G WC [cWW][XIX] 10.5 54.97; 53.26 1.71 -2.22 0.0 4.23
tRNA 1H4Q 31!T:39!T G:C WC [cWW][XIX] 10.35 54.32; 57.93 3.61 -3.08 0.17 8.14
tRNA 1H4Q 32!T:38!T U:A WC [cWW][XX] 10.23 58.58; 56.22 2.36 -10.52 0.71 21.24
tRNA 1H4Q 49!T:65!T G:U Wb [cWW][XXVIII] 10.5 43.97; 65.58 21.61 -5.37 0.08 7.98
tRNA 1H4Q 50!T:64!T C:G WC [cWW][XIX] 10.53 56.77; 57.16 0.39 -10.98 0.1 14.07
tRNA 1H4Q 51!T:63!T U:A WC [cWW][XX] 10.32 55.45; 56.05 0.6 -6.62 0.04 7.5
tRNA 1H4Q 53!T:61!T G:C WC [cWW][XIX] 10.4 54.99; 53.19 1.8 -8.94 0.47 17.83
tRNA 1H4Q 54!T:58!T U:G rH_1 [tWH][-] 9.51 27.2; 16.83 10.37 169.0 0.35 7.86
tRNA 1H4Q 55!T:57!T U:A S_PSU(sb:O2*-N7) [---][-] 6.57 94.43; 38.41 56.02 178.26 2.2 24.86