Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 1H4S BPC Identified: 31 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
tRNA 1H4S 4!T:69!T G:C WC [cWW][XIX] 10.74 52.07; 53.79 1.72 0.64 0.07 15.72
tRNA 1H4S 5!T:68!T G:C WC [cWW][XIX] 10.78 50.2; 52.99 2.79 -5.88 0.4 11.26
tRNA 1H4S 6!T:67!T A:U WC [cWW][XX] 10.06 59.02; 59.51 0.49 -4.12 0.2 3.61
tRNA 1H4S 7!T:66!T G:C WC [cWW][XIX] 10.69 56.59; 55.1 1.49 -0.69 0.28 5.06
tRNA 1H4S 8!T:21!T U:A fS(sb:O2*-N1) [tSW][-] 8.73 106.68; 50.77 55.91 159.32 0.31 20.38
tRNA 1H4S 8!T:14!T U:A rH_1 [tWH][XXIV] 9.67 31.72; 14.06 17.67 167.03 0.45 12.56
tRNA 1H4S 9!T:23!T A:C rS* [tHH][-] 11.29 34.62; 9.7 24.92 112.49 0.95 17.53
tRNA 1H4S 10!T:45!T G:G H_3 [---][-] 10.2 39.94; 99.74 59.8 -3.08 0.78 28.64
tRNA 1H4S 10!T:25!T G:C WC [cWW][XIX] 10.26 53.82; 61.62 7.8 3.76 0.2 3.69
tRNA 1H4S 11!T:24!T C:G WC [cWW][XIX] 10.28 54.2; 54.43 0.23 -2.91 0.17 6.42
tRNA 1H4S 12!T:23!T G:C WC [cWW][XIX] 10.41 53.91; 57.49 3.59 -5.63 0.13 13.3
tRNA 1H4S 13!T:22!T C:G WC [cWW][XIX] 10.52 55.38; 55.17 0.21 -9.31 0.16 8.76
tRNA 1H4S 15!T:48!T G:C rWb [tWW][XXII] 10.44 37.65; 61.73 24.08 178.57 0.17 6.39
tRNA 1H4S 18!T:55!T G:U fS_PSU [---][-] 8.9 28.49; 123.79 95.3 -160.44 0.27 15.46
tRNA 1H4S 19!T:56!T G:C WC [cWW][XIX] 10.26 60.97; 51.19 9.77 -18.06 1.13 37.44
tRNA 1H4S 19!T:20!T G:U pS* [cHS][-] 6.39 151.53; 54.53 97.0 13.65 0.0 7.71
tRNA 1H4S 22!T:46!T G:G rH_1 [tWH][VII] 10.95 30.24; 33.81 3.56 164.16 0.48 12.46
tRNA 1H4S 26!T:44!T A:G WC [cWW][VIII] 12.33 47.34; 51.45 4.11 -11.98 1.73 46.07
tRNA 1H4S 27!T:43!T C:G WC [cWW][XIX] 10.38 54.86; 54.86 0.0 -17.33 1.36 38.12
tRNA 1H4S 28!T:42!T C:G WC [cWW][XIX] 10.52 55.91; 55.48 0.42 -13.88 0.2 17.84
tRNA 1H4S 29!T:41!T U:A WC [cWW][XX] 10.48 54.38; 55.86 1.47 -9.22 0.45 18.98
tRNA 1H4S 30!T:40!T C:G WC [cWW][XIX] 10.49 56.8; 54.25 2.55 -2.09 0.02 1.74
tRNA 1H4S 31!T:39!T G:C WC [cWW][XIX] 10.4 55.6; 57.46 1.86 -4.41 0.18 9.75
tRNA 1H4S 32!T:38!T U:A WC [cWW][XX] 10.06 58.27; 59.38 1.1 -9.66 0.7 23.47
tRNA 1H4S 49!T:65!T G:U Wb [cWW][XXVIII] 10.61 44.03; 64.12 20.09 -3.74 0.2 9.77
tRNA 1H4S 50!T:64!T C:G WC [cWW][XIX] 10.53 56.81; 57.76 0.95 -9.8 0.24 11.39
tRNA 1H4S 51!T:63!T U:A WC [cWW][XX] 10.23 56.84; 56.93 0.09 -7.17 0.25 15.42
tRNA 1H4S 52!T:62!T G:C Wb [---][-] 10.48 41.36; 54.37 13.02 -9.23 0.27 12.06
tRNA 1H4S 53!T:61!T G:C WC [cWW][XIX] 10.42 53.98; 53.68 0.31 -9.11 0.44 16.5
tRNA 1H4S 54!T:58!T U:G rH_1 [tWH][-] 9.48 29.19; 16.71 12.48 171.13 0.2 9.71
tRNA 1H4S 55!T:57!T U:A S_PSU(sb:O2*-N7) [---][-] 6.57 96.66; 40.25 56.41 -179.91 1.98 24.13