Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 1I6U BPC Identified: 40 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
rRNA 1I6U 1!C:37!C G:C WC [cWW][XIX] 10.67 53.83; 56.12 2.29 1.8 0.31 8.24
rRNA 1I6U 2!C:36!C G:C WC [cWW][XIX] 10.65 54.75; 54.68 0.07 -3.87 0.0 6.38
rRNA 1I6U 3!C:35!C G:C WC [cWW][XIX] 10.51 55.62; 58.87 3.25 -1.98 0.08 5.37
rRNA 1I6U 4!C:34!C C:G WC [cWW][XIX] 10.63 55.28; 54.97 0.31 -1.74 0.24 8.08
rRNA 1I6U 5!C:33!C C:G WC [cWW][XIX] 10.71 54.29; 52.93 1.36 -2.64 0.06 6.51
rRNA 1I6U 6!C:32!C C:G WC [cWW][XIX] 10.66 55.11; 55.68 0.57 -3.24 0.14 10.12
rRNA 1I6U 7!C:31!C G:C WC [cWW][XIX] 10.59 54.31; 55.66 1.35 -6.78 0.14 12.88
rRNA 1I6U 8!C:30!C G:C WC [cWW][XIX] 10.56 54.86; 55.25 0.39 -8.3 0.42 17.51
rRNA 1I6U 9!C:29!C U:G Wb [cWW][XXVIII] 10.51 67.23; 39.86 27.37 -4.85 0.61 21.33
rRNA 1I6U 10!C:11!C A:A pS [cSH][-] 6.82 149.16; 30.19 118.97 1.57 0.35 9.05
rRNA 1I6U 11!C:28!C A:U WC [cWW][XX] 10.32 56.82; 58.34 1.51 2.39 0.05 4.05
rRNA 1I6U 12!C:27!C G:C WC [cWW][XIX] 10.61 55.39; 52.91 2.48 -9.84 0.51 28.16
rRNA 1I6U 13!C:26!C U:A sWC [---][-] 10.34 101.11; 32.06 69.05 1.53 0.67 30.62
rRNA 1I6U 13!C:24!C U:A WC [cWW][XX] 10.87 50.87; 52.27 1.39 -16.74 0.74 25.66
rRNA 1I6U 14!C:23!C C:G WC [cWW][XIX] 10.69 53.46; 53.81 0.35 -11.93 0.3 15.91
rRNA 1I6U 15!C:22!C U:A WC [cWW][XX] 10.7 53.51; 51.67 1.85 -12.33 0.06 14.21
rRNA 1I6U 16!C:21!C C:G WC [cWW][XIX] 10.85 53.43; 50.89 2.55 -8.72 0.27 18.16
rRNA 1I6U 17!C:20!C U:G fS_1 [tSW][-] 9.82 94.73; 24.47 70.26 174.57 1.03 23.65
rRNA 1I6U 25!C:27!C U:C pS [cSH][-] 9.33 114.82; 26.0 88.83 13.93 1.8 24.17
rRNA 1I6U 25!C:26!C U:A pS [cSH][-] 6.41 148.65; 33.66 114.98 -22.6 0.08 28.13
rRNA 1I6U 1!D:37!D G:C WC [cWW][XIX] 10.78 52.96; 54.32 1.36 1.9 0.24 7.78
rRNA 1I6U 2!D:36!D G:C WC [cWW][XIX] 10.65 53.99; 54.75 0.75 -4.83 0.12 7.01
rRNA 1I6U 3!D:35!D G:C WC [cWW][XIX] 10.71 52.72; 55.27 2.55 -3.14 0.05 7.15
rRNA 1I6U 4!D:34!D C:G WC [cWW][XIX] 10.72 54.85; 53.93 0.92 -1.05 0.06 5.4
rRNA 1I6U 5!D:33!D C:G WC [cWW][XIX] 10.68 53.93; 55.44 1.51 -2.82 0.15 4.43
rRNA 1I6U 6!D:32!D C:G WC [cWW][XIX] 10.73 54.49; 54.43 0.06 -3.7 0.09 6.65
rRNA 1I6U 7!D:31!D G:C WC [cWW][XIX] 10.55 56.06; 56.56 0.5 -0.82 0.08 5.53
rRNA 1I6U 8!D:30!D G:C WC [cWW][XIX] 10.66 54.37; 54.51 0.14 -8.05 0.46 22.76
rRNA 1I6U 9!D:29!D U:G Wb [cWW][XXVIII] 10.58 66.18; 40.15 26.04 -8.78 0.12 21.95
rRNA 1I6U 10!D:11!D A:A pS [cSH][-] 6.86 157.41; 30.02 127.39 6.95 0.13 9.55
rRNA 1I6U 11!D:28!D A:U WC [cWW][XX] 10.61 53.04; 55.47 2.42 -0.01 0.39 9.58
rRNA 1I6U 12!D:27!D G:C WC [cWW][XIX] 10.55 53.96; 54.56 0.59 -10.78 0.29 26.28
rRNA 1I6U 13!D:26!D U:A sWC [---][-] 10.42 101.12; 31.89 69.23 -0.11 0.46 24.45
rRNA 1I6U 13!D:24!D U:A WC [cWW][XX] 10.77 51.13; 55.71 4.58 -10.4 0.84 27.78
rRNA 1I6U 14!D:23!D C:G WC [cWW][XIX] 10.75 52.7; 53.97 1.27 -5.76 0.43 14.82
rRNA 1I6U 15!D:22!D U:A WC [cWW][XX] 10.51 55.47; 55.41 0.05 -7.76 0.26 16.07
rRNA 1I6U 16!D:21!D C:G WC [cWW][XIX] 10.52 57.67; 56.91 0.76 -3.94 0.16 8.04
rRNA 1I6U 17!D:20!D U:G fS_1 [tSW][-] 9.6 100.57; 24.11 76.45 168.34 0.4 11.82
rRNA 1I6U 25!D:27!D U:C pS [cSH][-] 9.38 116.2; 25.28 90.92 14.75 1.32 25.46
rRNA 1I6U 25!D:26!D U:A pS [cSH][-] 6.67 149.73; 33.2 116.53 -20.91 0.11 31.26