Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 1I9V BPC Identified: 29 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
tRNA 1I9V 1!A:72!A G:C WC [cWW][XIX] 10.42 54.31; 57.41 3.1 5.78 0.18 14.38
tRNA 1I9V 2!A:71!A C:G WC [cWW][XIX] 11.03 49.11; 50.96 1.85 -11.7 0.05 16.67
tRNA 1I9V 3!A:70!A G:C WC [cWW][XIX] 10.93 58.38; 46.75 11.63 -2.07 0.15 11.09
tRNA 1I9V 4!A:69!A G:U Wb [cWW][XXVIII] 10.3 43.95; 63.48 19.54 -4.0 0.32 16.34
tRNA 1I9V 5!A:68!A A:U WC [cWW][XX] 10.46 51.99; 57.51 5.52 -10.1 0.08 17.32
tRNA 1I9V 6!A:67!A U:A WC [cWW][XX] 10.06 62.08; 52.91 9.17 -16.94 0.11 21.46
tRNA 1I9V 7!A:66!A U:A WC [cWW][XX] 10.58 55.83; 53.44 2.39 3.3 0.2 1.52
tRNA 1I9V 8!A:14!A U:A rH_1 [tWH][XXIV] 9.42 29.46; 19.24 10.23 167.41 0.19 11.58
tRNA 1I9V 9!A:23!A A:A rS* [tHH][-] 10.7 13.61; 9.41 4.2 160.02 0.02 12.03
tRNA 1I9V 10!A:45!A G:G pS_1 [cSH][-] 8.18 41.84; 124.05 82.22 -1.87 0.54 27.3
tRNA 1I9V 10!A:25!A G:C WC [cWW][XIX] 10.71 51.83; 56.87 5.04 -8.66 0.07 11.43
tRNA 1I9V 11!A:24!A C:G WC [cWW][XIX] 10.46 52.02; 54.29 2.27 -9.93 0.15 13.57
tRNA 1I9V 12!A:23!A U:A WC [cWW][XX] 10.59 53.92; 52.91 1.01 -17.8 0.4 17.71
tRNA 1I9V 13!A:22!A C:G WC [cWW][XIX] 10.76 53.99; 52.97 1.02 -4.82 0.04 5.98
tRNA 1I9V 15!A:48!A G:C rWb [tWW][XXII] 10.64 36.88; 61.08 24.19 -171.98 0.03 1.9
tRNA 1I9V 19!A:56!A G:C WC [cWW][XIX] 10.43 61.47; 53.69 7.78 -27.49 1.04 37.17
tRNA 1I9V 22!A:46!A G:G rH_1 [tWH][VII] 10.79 35.01; 29.38 5.62 -171.96 0.09 8.63
tRNA 1I9V 27!A:43!A C:G WC [cWW][XIX] 10.54 55.49; 57.85 2.36 -10.02 0.17 16.12
tRNA 1I9V 28!A:42!A C:G WC [cWW][XIX] 10.65 51.89; 56.46 4.57 -10.42 0.34 16.3
tRNA 1I9V 29!A:41!A A:U WC [cWW][XX] 10.07 60.06; 56.53 3.52 -2.63 0.14 4.92
tRNA 1I9V 30!A:40!A G:C WC [cWW][XIX] 10.56 56.18; 49.8 6.37 -13.77 0.31 39.11
tRNA 1I9V 33!A:35!A U:A S(sb:O2*-N7) [---][-] 6.6 82.92; 47.65 35.27 -176.89 1.49 23.61
tRNA 1I9V 47!A:50!A U:U rpS(ps:O1P-O2*) [---][-] 8.44 80.06; 113.2 33.14 155.09 0.45 42.07
tRNA 1I9V 49!A:65!A C:G WC [cWW][XIX] 10.81 53.18; 56.25 3.07 -1.9 0.04 7.37
tRNA 1I9V 50!A:64!A U:A WC [cWW][XX] 10.73 50.48; 56.28 5.8 -7.74 0.01 11.68
tRNA 1I9V 51!A:63!A G:C WC [cWW][XIX] 10.47 52.96; 54.39 1.43 -8.2 0.1 20.16
tRNA 1I9V 52!A:62!A U:A WC [cWW][XX] 10.31 55.83; 55.95 0.12 -11.06 0.2 14.83
tRNA 1I9V 53!A:61!A G:C WC [cWW][XIX] 10.55 58.02; 56.46 1.56 -7.1 0.27 6.64
tRNA 1I9V 54!A:58!A U:A rH_1 [tWH][XXIV] 9.71 27.11; 22.98 4.13 167.76 0.34 7.14