Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 1I9X
BPC Identified: 12
Ambiguities: 0
| snRNA |
1I9X |
1!A:13!B |
U:A |
WC [cWW][XX] |
10.24 |
56.79; 61.05 |
4.26 |
-8.0 |
0.11 |
10.22 |
| snRNA |
1I9X |
2!A:12!B |
A:U |
WC [cWW][XX] |
10.32 |
55.28; 57.87 |
2.6 |
-14.1 |
0.19 |
17.76 |
| snRNA |
1I9X |
3!A:11!B |
C:G |
WC [cWW][XIX] |
10.34 |
58.57; 56.44 |
2.13 |
-13.63 |
0.08 |
19.21 |
| snRNA |
1I9X |
4!A:10!B |
U:A |
WC [cWW][XX] |
10.41 |
56.12; 55.14 |
0.98 |
-13.43 |
0.12 |
16.36 |
| snRNA |
1I9X |
6!A:9!B |
A:U |
WC [cWW][XX] |
9.79 |
63.82; 59.78 |
4.04 |
-9.45 |
0.12 |
16.87 |
| snRNA |
1I9X |
7!A:8!B |
C:G |
WC [cWW][XIX] |
10.62 |
53.96; 55.06 |
1.1 |
-9.91 |
0.06 |
24.45 |
| snRNA |
1I9X |
8!A:7!B |
G:C |
WC [cWW][XIX] |
10.57 |
55.8; 58.13 |
2.32 |
-10.57 |
0.07 |
12.73 |
| snRNA |
1I9X |
9!A:6!B |
U:A |
WC [cWW][XX] |
10.03 |
57.24; 58.19 |
0.95 |
-9.62 |
0.17 |
11.44 |
| snRNA |
1I9X |
10!A:4!B |
A:U |
WC [cWW][XX] |
10.49 |
55.77; 53.31 |
2.47 |
-7.5 |
0.4 |
9.66 |
| snRNA |
1I9X |
11!A:3!B |
G:C |
WC [cWW][XIX] |
10.7 |
54.57; 56.75 |
2.18 |
-14.38 |
0.2 |
17.16 |
| snRNA |
1I9X |
12!A:2!B |
U:A |
WC [cWW][XX] |
10.35 |
58.71; 59.18 |
0.47 |
-12.2 |
0.02 |
14.32 |
| snRNA |
1I9X |
13!A:1!B |
A:U |
WC [cWW][XX] |
10.53 |
57.14; 54.08 |
3.06 |
-7.62 |
0.25 |
7.31 |