Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 1JBS BPC Identified: 28 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
rRNA 1JBS 1!C:29!C C:G WC [cWW][XIX] 10.77 53.95; 52.35 1.59 -10.91 0.27 10.54
rRNA 1JBS 2!C:28!C G:C WC [cWW][XIX] 10.46 55.27; 56.14 0.87 -8.22 0.0 5.83
rRNA 1JBS 3!C:27!C C:G WC [cWW][XIX] 10.35 57.22; 54.62 2.6 -6.12 0.27 7.34
rRNA 1JBS 4!C:26!C U:A WC [cWW][XX] 10.34 55.36; 58.72 3.37 -1.38 0.55 10.8
rRNA 1JBS 5!C:25!C C:G WC [cWW][XIX] 10.53 57.78; 55.82 1.96 -1.31 0.22 12.79
rRNA 1JBS 6!C:24!C C:G WC [cWW][XIX] 10.55 56.4; 54.53 1.87 -1.81 0.02 1.76
rRNA 1JBS 7!C:23!C U:C sWC [---][-] 10.64 84.75; 24.15 60.6 15.24 0.59 14.73
rRNA 1JBS 8!C:22!C C:C S [---][-] 9.1 103.14; 3.35 99.78 103.27 0.1 11.62
rRNA 1JBS 9!C:21!C A:A rS* [tHH][-] 11.03 10.43; 13.95 3.52 -135.04 0.7 15.3
rRNA 1JBS 10!C:11!C G:U pS* [cHS][-] 6.8 142.31; 52.57 89.74 23.44 0.88 20.19
rRNA 1JBS 11!C:20!C U:A rH_1 [tWH][XXIV] 9.56 29.38; 22.34 7.04 -164.53 0.81 22.61
rRNA 1JBS 11!C:19!C U:G S*(pb:O2P-N1) [---][-] 9.86 20.57; 69.62 49.05 97.64 2.59 18.5
rRNA 1JBS 12!C:19!C A:G S [tSH][XI] 9.32 8.81; 100.42 91.61 -10.34 0.21 7.77
rRNA 1JBS 13!C:18!C C:G WC [cWW][XIX] 10.7 52.71; 54.02 1.31 -1.98 0.07 11.62
rRNA 1JBS 1!D:29!D C:G WC [cWW][XIX] 10.68 52.93; 53.12 0.19 -8.52 0.15 9.64
rRNA 1JBS 2!D:28!D G:C WC [cWW][XIX] 10.61 53.2; 55.96 2.75 -11.64 0.02 7.27
rRNA 1JBS 3!D:27!D C:G WC [cWW][XIX] 10.66 56.86; 54.27 2.59 -9.2 0.15 9.0
rRNA 1JBS 4!D:26!D U:A WC [cWW][XX] 10.62 54.01; 56.33 2.32 -4.1 0.26 2.72
rRNA 1JBS 5!D:25!D C:G WC [cWW][XIX] 10.76 55.16; 53.16 2.0 0.4 0.31 10.35
rRNA 1JBS 6!D:24!D C:G WC [cWW][XIX] 10.71 55.27; 53.37 1.9 -1.11 0.04 1.9
rRNA 1JBS 7!D:23!D U:C sWC [---][-] 10.46 83.02; 25.07 57.95 11.28 0.63 18.1
rRNA 1JBS 8!D:22!D C:C S [---][-] 9.12 100.76; 4.77 95.99 107.25 0.09 13.15
rRNA 1JBS 9!D:21!D A:A rS* [tHH][-] 10.99 8.39; 14.54 6.16 -111.84 0.92 16.55
rRNA 1JBS 10!D:20!D G:A S(bp:N1-O2P)_3 [---][-] 10.91 81.86; 60.84 21.01 -161.71 0.49 16.05
rRNA 1JBS 10!D:11!D G:U pS* [cHS][-] 6.65 140.65; 55.3 85.36 18.5 0.85 15.23
rRNA 1JBS 11!D:20!D U:A rH_1 [tWH][XXIV] 9.59 27.03; 24.14 2.9 -165.72 0.33 8.29
rRNA 1JBS 12!D:19!D A:G S [tSH][XI] 9.3 8.19; 98.08 89.89 -33.65 0.53 11.17
rRNA 1JBS 13!D:18!D C:G WC [cWW][XIX] 10.7 55.16; 55.01 0.14 -9.94 0.35 15.83