Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 1JID
BPC Identified: 12
Ambiguities: 0
| SRP_RNA |
1JID |
135!B:162!B |
G:U |
Wb [cWW][XXVIII] |
10.32 |
43.0; 71.65 |
28.65 |
0.37 |
0.7 |
13.5 |
| SRP_RNA |
1JID |
136!B:161!B |
G:C |
WC [cWW][XIX] |
10.56 |
53.79; 57.53 |
3.74 |
-9.31 |
0.05 |
7.57 |
| SRP_RNA |
1JID |
137!B:160!B |
U:A |
WC [cWW][XX] |
10.25 |
59.33; 58.67 |
0.66 |
-13.91 |
0.18 |
14.05 |
| SRP_RNA |
1JID |
138!B:159!B |
G:C |
WC [cWW][XIX] |
10.6 |
54.16; 56.34 |
2.18 |
-11.47 |
0.03 |
13.42 |
| SRP_RNA |
1JID |
139!B:158!B |
A:C |
Wb [cWW][-] |
10.39 |
44.53; 69.87 |
25.34 |
-10.57 |
0.11 |
13.66 |
| SRP_RNA |
1JID |
140!B:157!B |
C:A |
Wb [cWW][-] |
10.23 |
71.82; 49.26 |
22.56 |
-13.54 |
0.42 |
14.69 |
| SRP_RNA |
1JID |
141!B:156!B |
C:G |
WC [cWW][XIX] |
10.4 |
59.66; 54.87 |
4.79 |
-8.44 |
0.07 |
13.5 |
| SRP_RNA |
1JID |
142!B:155!B |
U:G |
Wb [cWW][XXVIII] |
10.31 |
65.78; 44.79 |
20.99 |
-4.83 |
0.02 |
10.8 |
| SRP_RNA |
1JID |
143!B:154!B |
C:G |
WC [cWW][XIX] |
10.57 |
55.69; 54.41 |
1.28 |
-2.66 |
0.44 |
14.39 |
| SRP_RNA |
1JID |
144!B:153!B |
C:G |
WC [cWW][XIX] |
10.52 |
56.13; 55.87 |
0.26 |
-4.79 |
0.35 |
11.47 |
| SRP_RNA |
1JID |
145!B:152!B |
C:G |
WC [cWW][XIX] |
10.48 |
56.66; 55.43 |
1.23 |
-1.73 |
0.14 |
12.71 |
| SRP_RNA |
1JID |
146!B:151!B |
G:C |
WC [cWW][XIX] |
10.55 |
56.79; 54.22 |
2.57 |
3.13 |
0.05 |
7.68 |