Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 1JZV BPC Identified: 22 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
vRNA 1JZV 1!A:17!B G:C WC [cWW][XIX] 10.7 51.86; 53.91 2.05 -8.54 0.04 10.07
vRNA 1JZV 2!A:16!B G:C WC [cWW][XIX] 10.6 52.9; 58.8 5.91 -12.18 0.11 13.73
vRNA 1JZV 3!A:15!B C:G WC [cWW][XIX] 10.5 56.6; 56.03 0.57 -7.31 0.08 7.52
vRNA 1JZV 4!A:14!B G:C WC [cWW][XIX] 10.47 57.16; 56.21 0.95 2.01 0.25 8.04
vRNA 1JZV 5!A:35!D A:G rS(ps:O1P-O2*) [---][-] 8.63 149.27; 124.12 25.15 63.38 1.99 53.09
vRNA 1JZV 5!A:12!B A:U WC [cWW][XX] 10.96 50.85; 51.7 0.85 -15.2 0.49 19.27
vRNA 1JZV 6!A:33!D C:A rpS(bs:O2-O2*) [cSS][-] 5.65 108.88; 148.21 39.33 -42.16 1.59 20.58
vRNA 1JZV 6!A:11!B C:G WC [cWW][XIX] 10.49 58.27; 55.68 2.58 -9.97 0.42 21.09
vRNA 1JZV 7!A:10!B U:A WC [cWW][XX] 10.41 55.83; 57.86 2.03 -8.4 0.07 12.78
vRNA 1JZV 8!A:9!B G:C WC [cWW][XIX] 10.6 56.19; 54.32 1.87 -4.76 0.21 10.12
vRNA 1JZV 11!B:33!D G:A rS [tSS][-] 8.18 87.89; 59.17 28.72 152.83 0.9 38.35
vRNA 1JZV 13!B:31!D A:G rS [tSS][-] 8.4 59.2; 89.16 29.96 147.05 0.82 36.65
vRNA 1JZV 13!B:26!C A:C rpS(bs:O2-O2*) [cSS][-] 6.03 141.28; 110.33 30.95 -44.37 1.63 17.03
vRNA 1JZV 15!B:25!C G:A rS(ps:O1P-O2*) [---][-] 8.65 121.78; 142.47 20.69 77.7 1.49 56.88
vRNA 1JZV 21!C:37!D G:C WC [cWW][XIX] 10.57 52.76; 55.7 2.95 -12.55 0.04 15.81
vRNA 1JZV 22!C:36!D G:C WC [cWW][XIX] 10.48 55.2; 63.04 7.83 -8.68 0.57 18.34
vRNA 1JZV 23!C:35!D C:G WC [cWW][XIX] 10.74 55.25; 53.15 2.1 -9.81 0.1 11.07
vRNA 1JZV 24!C:34!D G:C WC [cWW][XIX] 10.5 58.42; 57.33 1.09 6.08 0.37 9.29
vRNA 1JZV 25!C:32!D A:U WC [cWW][XX] 10.74 52.43; 53.72 1.29 -14.09 0.39 18.82
vRNA 1JZV 26!C:31!D C:G WC [cWW][XIX] 10.46 57.3; 54.23 3.07 -14.57 0.56 21.01
vRNA 1JZV 27!C:30!D U:A WC [cWW][XX] 10.44 54.96; 58.25 3.29 -13.28 0.16 16.13
vRNA 1JZV 28!C:29!D G:C WC [cWW][XIX] 10.61 55.62; 55.62 0.01 -8.72 0.26 4.86