Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 1K8W
BPC Identified: 8
Ambiguities: 0
| tRNA |
1K8W |
402!B:422!B |
G:C |
WC [cWW][XIX] |
10.61 |
53.49; 57.01 |
3.51 |
-8.69 |
0.72 |
10.46 |
| tRNA |
1K8W |
403!B:421!B |
C:G |
WC [cWW][XIX] |
10.53 |
55.85; 54.08 |
1.77 |
-6.36 |
0.0 |
13.81 |
| tRNA |
1K8W |
404!B:420!B |
A:U |
WC [cWW][XX] |
10.53 |
56.26; 55.8 |
0.46 |
-5.58 |
0.21 |
10.67 |
| tRNA |
1K8W |
405!B:419!B |
A:U |
WC [cWW][XX] |
10.67 |
53.36; 52.75 |
0.61 |
-8.64 |
0.42 |
12.06 |
| tRNA |
1K8W |
406!B:418!B |
C:G |
WC [cWW][XIX] |
10.52 |
57.22; 54.52 |
2.7 |
-8.39 |
0.56 |
11.98 |
| tRNA |
1K8W |
407!B:417!B |
G:C |
WC [cWW][XIX] |
10.64 |
54.81; 53.87 |
0.95 |
-8.03 |
0.31 |
18.56 |
| tRNA |
1K8W |
408!B:416!B |
G:C |
WC [cWW][XIX] |
10.69 |
54.65; 52.9 |
1.75 |
-11.9 |
0.47 |
13.96 |
| tRNA |
1K8W |
409!B:413!B |
U:A |
rH_1 [tWH][XXIV] |
9.56 |
38.51; 20.76 |
17.75 |
-120.33 |
1.03 |
26.79 |