Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 1KH6 BPC Identified: 23 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
IRES_RNA 1KH6 1!A:53!A G:C WC [cWW][XIX] 10.76 53.33; 51.29 2.03 -1.56 0.58 20.34
IRES_RNA 1KH6 2!A:52!A G:C WC [cWW][XIX] 10.26 56.69; 51.45 5.24 -8.28 0.14 9.8
IRES_RNA 1KH6 3!A:51!A C:G WC [cWW][XIX] 10.25 55.92; 56.09 0.17 -0.44 0.11 6.22
IRES_RNA 1KH6 4!A:50!A G:C WC [cWW][XIX] 10.54 53.93; 54.4 0.47 -4.98 0.08 13.01
IRES_RNA 1KH6 5!A:49!A G:C WC [cWW][XIX] 10.83 54.12; 49.61 4.51 -4.66 0.2 12.57
IRES_RNA 1KH6 6!A:37!A A:U pS [cSH][-] 8.08 19.09; 143.22 124.13 -20.03 0.11 35.34
IRES_RNA 1KH6 6!A:25!A A:A pfS [cSW][-] 9.08 36.48; 126.59 90.11 -9.13 1.17 33.06
IRES_RNA 1KH6 7!A:38!A A:U H_1 [cWH][XXIII] 7.97 44.51; 73.79 29.27 -12.16 0.06 13.57
IRES_RNA 1KH6 7!A:24!A A:A pfS [cSW][-] 9.55 35.84; 124.57 88.73 -11.91 0.16 14.61
IRES_RNA 1KH6 8!A:23!A C:G WC [cWW][XIX] 10.42 51.35; 61.55 10.2 -6.22 0.48 18.92
IRES_RNA 1KH6 9!A:22!A C:G WC_Mo [cWW][XIX] 10.13 62.87; 67.46 4.59 12.8 0.14 13.62
IRES_RNA 1KH6 24!A:37!A A:U WC [cWW][XX] 10.56 54.94; 58.59 3.66 -10.07 0.31 8.43
IRES_RNA 1KH6 25!A:36!A A:U WC [cWW][XX] 10.08 51.49; 61.73 10.24 -11.54 0.07 15.57
IRES_RNA 1KH6 26!A:35!A U:A WC [cWW][XX] 9.76 65.71; 57.14 8.57 -13.37 0.06 17.08
IRES_RNA 1KH6 27!A:34!A C:G Wb [---][-] 10.23 71.06; 56.29 14.77 -8.36 0.17 11.05
IRES_RNA 1KH6 28!A:33!A C:G WC [cWW][XIX] 10.48 58.9; 57.92 0.97 7.22 0.23 5.8
IRES_RNA 1KH6 29!A:32!A G:A S [tSH][XI] 9.25 103.64; 11.09 92.54 -97.69 0.38 13.35
IRES_RNA 1KH6 29!A:31!A G:A S(sb:O2*-N7) [---][-] 7.51 99.28; 31.37 67.91 -170.89 1.3 24.13
IRES_RNA 1KH6 39!A:48!A G:C WC [cWW][XIX] 10.44 52.15; 54.71 2.57 7.63 0.24 7.14
IRES_RNA 1KH6 40!A:47!A G:C WC [cWW][XIX] 10.41 53.93; 55.17 1.24 2.62 0.26 8.3
IRES_RNA 1KH6 41!A:46!A G:C WC [cWW][XIX] 10.46 53.18; 56.67 3.49 -3.7 0.46 19.56
IRES_RNA 1KH6 42!A:45!A C:G WC [cWW][XIX] 10.41 57.04; 48.92 8.12 -0.19 0.02 4.48
IRES_RNA 1KH6 43!A:44!A G:U Wb [cWW][XXVIII] 10.64 46.13; 62.35 16.22 0.96 0.0 13.15