Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 1KXK BPC Identified: 30 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
Group_II_RNA 1KXK 4!A:66!A U:A rH_1 [tWH][XXIV] 9.43 30.06; 24.57 5.49 -171.37 0.03 4.74
Group_II_RNA 1KXK 5!A:65!A A:G S [tSH][XI] 9.81 8.55; 97.96 89.4 -14.36 0.04 3.35
Group_II_RNA 1KXK 6!A:64!A C:G WC [cWW][XIX] 10.51 54.76; 54.49 0.27 -6.37 0.41 10.6
Group_II_RNA 1KXK 7!A:63!A C:G WC [cWW][XIX] 10.45 54.07; 53.39 0.68 -6.6 0.2 8.73
Group_II_RNA 1KXK 8!A:62!A U:G Wb [cWW][XXVIII] 10.13 70.51; 40.42 30.08 -3.06 0.07 5.72
Group_II_RNA 1KXK 11!A:61!A C:G WC [cWW][XIX] 10.37 61.41; 52.65 8.76 -6.68 0.03 16.82
Group_II_RNA 1KXK 12!A:60!A G:C WC [cWW][XIX] 10.57 59.12; 50.32 8.8 -3.05 0.06 8.58
Group_II_RNA 1KXK 13!A:59!A G:C WC [cWW][XIX] 10.67 45.22; 52.69 7.46 -9.97 0.38 10.12
Group_II_RNA 1KXK 14!A:58!A G:C WC [cWW][XIX] 10.59 53.45; 53.55 0.1 -2.38 0.13 12.71
Group_II_RNA 1KXK 15!A:57!A C:G WC [cWW][XIX] 10.51 55.08; 51.6 3.48 -7.15 0.1 7.99
Group_II_RNA 1KXK 16!A:55!A U:A rH_1 [tWH][XXIV] 10.03 40.77; 9.42 31.34 173.75 0.23 10.83
Group_II_RNA 1KXK 17!A:18!A A:A pS [cSH][-] 6.26 163.3; 33.9 129.4 28.25 0.8 14.68
Group_II_RNA 1KXK 19!A:54!A G:U Wb [cWW][XXVIII] 9.95 42.16; 76.03 33.87 -18.8 0.32 18.11
Group_II_RNA 1KXK 20!A:53!A G:C WC [cWW][XIX] 10.73 42.65; 49.59 6.94 -15.19 0.06 21.51
Group_II_RNA 1KXK 21!A:52!A A:U Wb* [---][-] 10.44 60.92; 46.27 14.66 -18.21 0.1 19.16
Group_II_RNA 1KXK 22!A:51!A G:U Wb [cWW][XXVIII] 11.1 40.86; 60.99 20.13 -14.77 0.55 13.86
Group_II_RNA 1KXK 23!A:50!A C:G Wb [---][-] 10.52 67.11; 52.26 14.84 -16.79 0.64 21.45
Group_II_RNA 1KXK 24!A:49!A C:G Wb [---][-] 10.5 61.36; 44.25 17.11 -21.29 0.17 25.67
Group_II_RNA 1KXK 25!A:48!A G:C WC [cWW][XIX] 10.8 45.78; 50.19 4.41 -12.2 0.65 7.79
Group_II_RNA 1KXK 26!A:47!A U:A WC [cWW][XX] 10.62 56.19; 58.17 1.98 -0.55 0.18 3.79
Group_II_RNA 1KXK 27!A:46!A A:U WC [cWW][XX] 10.54 59.39; 54.33 5.06 -7.13 0.37 9.0
Group_II_RNA 1KXK 28!A:45!A U:G Wb [cWW][XXVIII] 10.18 68.71; 42.38 26.33 -12.6 0.11 12.93
Group_II_RNA 1KXK 29!A:42!A G:C WC [cWW][XIX] 10.75 54.72; 49.39 5.32 -0.33 0.16 4.99
Group_II_RNA 1KXK 30!A:41!A C:G WC [cWW][XIX] 10.52 57.09; 52.22 4.87 -9.03 0.06 9.66
Group_II_RNA 1KXK 31!A:40!A G:C WC [cWW][XIX] 10.44 59.49; 58.69 0.8 -5.62 0.16 17.47
Group_II_RNA 1KXK 32!A:39!A A:U WC [cWW][XX] 10.47 58.82; 54.13 4.69 -7.06 0.15 10.26
Group_II_RNA 1KXK 33!A:38!A U:G Wb [cWW][XXVIII] 10.16 69.08; 41.86 27.23 0.4 0.03 1.42
Group_II_RNA 1KXK 34!A:37!A G:A S [tSH][XI] 9.21 94.08; 9.14 84.94 -92.56 0.4 20.97
Group_II_RNA 1KXK 34!A:36!A G:A S(sb:O2*-N7) [---][-] 7.15 87.39; 33.94 53.44 -168.23 2.45 30.38
Group_II_RNA 1KXK 64!A:67!A G:A rpS [cSS][-] 6.71 94.26; 135.36 41.1 -37.84 1.13 64.28