Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 1L3Z
BPC Identified: 13
Ambiguities: 0
| dsRNA |
1L3Z |
1!A:6!B |
G:C |
WC [cWW][XIX] |
10.58 |
54.02; 55.52 |
1.5 |
-7.8 |
0.41 |
13.98 |
| dsRNA |
1L3Z |
2!A:5!B |
U:A |
WC [cWW][XX] |
10.35 |
56.52; 57.05 |
0.53 |
-12.08 |
0.07 |
14.84 |
| dsRNA |
1L3Z |
3!A:14!C |
A:A |
fS(sb:O2*-N1)_1 [---][-] |
8.97 |
94.61; 48.8 |
45.81 |
163.1 |
2.03 |
48.77 |
| dsRNA |
1L3Z |
3!A:4!B |
A:U |
WC [cWW][XX] |
10.5 |
56.39; 56.21 |
0.18 |
-5.76 |
0.04 |
12.34 |
| dsRNA |
1L3Z |
4!A:3!B |
U:A |
WC [cWW][XX] |
10.5 |
56.21; 56.39 |
0.18 |
-5.76 |
0.04 |
12.34 |
| dsRNA |
1L3Z |
5!A:2!B |
A:U |
WC [cWW][XX] |
10.35 |
57.05; 56.52 |
0.53 |
-12.08 |
0.07 |
14.84 |
| dsRNA |
1L3Z |
6!A:1!B |
C:G |
WC [cWW][XIX] |
10.58 |
55.52; 54.02 |
1.5 |
-7.8 |
0.41 |
13.98 |
| dsRNA |
1L3Z |
8!C:13!D |
G:C |
WC [cWW][XIX] |
10.68 |
53.42; 54.73 |
1.31 |
-8.18 |
0.33 |
13.93 |
| dsRNA |
1L3Z |
9!C:12!D |
U:A |
WC [cWW][XX] |
10.49 |
54.88; 56.9 |
2.02 |
-9.15 |
0.08 |
12.0 |
| dsRNA |
1L3Z |
10!C:11!D |
A:U |
WC [cWW][XX] |
10.23 |
58.07; 59.02 |
0.95 |
-13.35 |
0.16 |
16.42 |
| dsRNA |
1L3Z |
11!C:10!D |
U:A |
WC [cWW][XX] |
10.23 |
59.02; 58.07 |
0.95 |
-13.35 |
0.16 |
16.42 |
| dsRNA |
1L3Z |
12!C:9!D |
A:U |
WC [cWW][XX] |
10.49 |
56.9; 54.88 |
2.02 |
-9.15 |
0.08 |
12.0 |
| dsRNA |
1L3Z |
13!C:8!D |
C:G |
WC [cWW][XIX] |
10.68 |
54.73; 53.42 |
1.31 |
-8.18 |
0.33 |
13.93 |