Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 1L8V BPC Identified: 147 Ambiguities: 2
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
Group_I_RNA 1L8V 107A:214A U:A WC [cWW][XX] 11.5 49.39; 48.28 1.11 -2.68 0.51 33.91
Group_I_RNA 1L8V 108A:213A G:C WC [cWW][XIX] 10.57 55.12; 59.38 4.26 -7.79 1.0 9.88
Group_I_RNA 1L8V 109A:212A G:C WC [cWW][XIX] 10.6 55.99; 57.18 1.19 -10.11 0.12 19.09
Group_I_RNA 1L8V 109A:184A G:A rpS [cSS][-] 5.64 110.17; 143.8 33.63 -40.34 0.71 9.66
Group_I_RNA 1L8V 110A:211A G:C WC [cWW][XIX] 10.58 55.44; 53.35 2.09 -0.85 1.19 25.76
Group_I_RNA 1L8V 110A:183A G:A pfS(sb:O2*-N3) [---][-] 5.55 156.41; 91.77 64.64 -46.72 0.32 25.56
Group_I_RNA 1L8V 111A:209A G:C WC [cWW][XIX] 10.94 53.9; 55.44 1.54 -6.48 0.5 15.67
Group_I_RNA 1L8V 112A:208A G:C WC [cWW][XIX] 10.73 53.67; 53.61 0.06 -5.94 0.01 9.81
Group_I_RNA 1L8V 113A:207A A:A S [tSH][-] 9.61 86.15; 5.65 80.5 -47.54 0.12 8.49
Group_I_RNA 1L8V 114A:206A* A:A S [tSH][-]; pS [cSH][-] 8.88 9.45; 95.94 86.49 -44.04 0.22 10.09
Group_I_RNA 1L8V 116A:205A G:U Wb [cWW][XXVIII] 10.31 49.13; 71.09 21.96 -1.58 0.48 22.21
Group_I_RNA 1L8V 117A:204A G:C WC [cWW][XIX] 11.28 50.28; 57.15 6.87 3.62 0.05 8.88
Group_I_RNA 1L8V 118A:203A G:C WC [cWW][XIX] 10.88 62.62; 57.65 4.97 3.09 0.04 6.31
Group_I_RNA 1L8V 119A:202A G:U WC [---][-] 10.47 58.16; 61.53 3.38 6.01 1.01 8.39
Group_I_RNA 1L8V 120A:201A U:G Wb [cWW][XXVIII] 10.69 61.87; 44.54 17.32 -1.84 0.69 6.91
Group_I_RNA 1L8V 121A:200A C:G WC [cWW][XIX] 11.14 49.69; 43.13 6.57 5.3 1.06 18.39
Group_I_RNA 1L8V 126A:202A G:U rS(ss:O2*-O2*)_1 [---][-] 5.21 100.83; 157.97 57.14 -124.7 2.4 50.25
Group_I_RNA 1L8V 126A:196A G:A WC [cWW][VIII] 12.79 47.32; 48.81 1.49 -11.16 0.68 26.16
Group_I_RNA 1L8V 127A:195A C:G WC [cWW][XIX] 10.27 53.22; 59.67 6.45 -19.62 1.03 37.39
Group_I_RNA 1L8V 128A:194A C:G WC [cWW][XIX] 10.66 54.33; 60.54 6.21 -13.97 0.32 18.79
Group_I_RNA 1L8V 129A:193A G:C WC [cWW][XIX] 10.37 53.89; 54.16 0.27 -20.34 0.82 20.33
Group_I_RNA 1L8V 131A:192A U:A WC [cWW][XX] 11.01 57.28; 59.16 1.88 -2.45 0.44 14.5
Group_I_RNA 1L8V 132A:191A C:G WC [cWW][XIX] 11.43 40.85; 54.72 13.87 5.37 0.31 9.49
Group_I_RNA 1L8V 133A:190A A:U WC [cWW][XX] 10.36 59.68; 56.69 2.98 -1.17 0.76 5.1
Group_I_RNA 1L8V 134A:189A G:C WC [cWW][XIX] 10.49 54.39; 55.54 1.15 -6.55 0.39 18.48
Group_I_RNA 1L8V 135A:187A U:A H_1 [cWH][XXIII] 8.26 60.11; 54.61 5.5 -4.61 0.2 7.39
Group_I_RNA 1L8V 136A:182A A:U WC [cWW][XX] 10.22 56.33; 59.18 2.85 -5.41 0.43 16.39
Group_I_RNA 1L8V 137A:186A C:A rpS(bs:O2-O2*) [cSS][-] 5.79 108.71; 144.47 35.76 -24.14 0.49 15.07
Group_I_RNA 1L8V 137A:181A C:G WC [cWW][XIX] 10.41 56.43; 52.85 3.58 -12.98 0.62 14.24
Group_I_RNA 1L8V 138A:180A C:G WC [cWW][XIX] 10.42 53.53; 49.78 3.75 -12.3 0.5 7.4
Group_I_RNA 1L8V 139A:164A A:G S [tSH][XI] 8.94 4.4; 106.63 102.23 6.5 1.37 29.98
Group_I_RNA 1L8V 140A:163A A:G S [tSH][XI] 9.42 9.45; 100.82 91.37 2.69 0.07 11.89
Group_I_RNA 1L8V 141A:162A G:U Wb [cWW][XXVIII] 10.4 43.85; 68.65 24.79 -10.36 0.22 18.96
Group_I_RNA 1L8V 142A:161A U:A WC [cWW][XX] 10.41 54.01; 57.68 3.67 -12.19 0.2 18.41
Group_I_RNA 1L8V 143A:160A C:G WC [cWW][XIX] 10.65 56.6; 52.71 3.89 -8.15 0.72 17.89
Group_I_RNA 1L8V 144A:159A U:A WC [cWW][XX] 10.52 53.38; 53.72 0.34 -5.59 0.76 16.99
Group_I_RNA 1L8V 145A:158A C:G WC [cWW][XIX] 10.52 55.79; 53.87 1.92 -2.46 0.18 10.78
Group_I_RNA 1L8V 146A:157A A:U WC [cWW][XX] 10.49 59.49; 56.95 2.54 -4.44 0.4 10.52
Group_I_RNA 1L8V 147A:156A G:U Wb [cWW][XXVIII] 10.24 44.97; 69.28 24.31 -2.18 0.9 4.75
Group_I_RNA 1L8V 148A:155A G:U Wb [cWW][XXVIII] 10.24 44.51; 69.94 25.43 -0.35 0.57 5.82
Group_I_RNA 1L8V 149A:154A G:C WC [cWW][XIX] 10.54 54.21; 60.85 6.64 8.57 0.08 6.4
Group_I_RNA 1L8V 150A:153A G:A S [tSH][XI] 9.22 96.45; 11.28 85.18 -86.15 1.11 11.13
Group_I_RNA 1L8V 150A:152A G:A S(sb:O2*-N7) [---][-] 7.7 89.91; 29.71 60.2 -172.23 1.98 25.97
Group_I_RNA 1L8V 152A:224A A:U rpS(sb:O2*-N3) [cSS][-] 5.5 96.48; 150.16 53.68 -72.17 0.28 35.16
Group_I_RNA 1L8V 153A:250A A:G rS [tSS][-] 8.06 65.21; 81.54 16.33 167.29 0.82 19.71
Group_I_RNA 1L8V 153A:223A A:C rpS(bs:O2-O2*) [cSS][-] 5.72 155.29; 108.55 46.74 -63.8 0.29 22.81
Group_I_RNA 1L8V 154A:251A C:G rS(ss:O2*-O2*) [---][-] 5.67 154.85; 157.17 2.32 -109.09 1.43 25.32
Group_I_RNA 1L8V 165A:175A C:G WC [cWW][XIX] 10.4 53.83; 56.02 2.18 -1.56 0.24 7.18
Group_I_RNA 1L8V 166A:174A C:G WC [cWW][XIX] 10.63 57.65; 53.97 3.68 -5.87 0.43 8.54
Group_I_RNA 1L8V 168A:188A U:G rH*_1 [tHW][-] 12.37 21.29; 21.57 0.28 163.1 0.16 13.27
Group_I_RNA 1L8V 169A:255!B G:C WC [cWW][XIX] 10.64 49.57; 53.54 3.97 -2.82 1.05 6.28
Group_I_RNA 1L8V 170A:254!B C:G WC [cWW][XIX] 10.66 56.86; 52.41 4.45 3.37 1.26 5.99
Group_I_RNA 1L8V 171A:172A A:A pS [cSH][-] 6.68 149.62; 33.68 115.94 4.59 0.05 7.85
Group_I_RNA 1L8V 181A:186A G:A rS [tSS][-] 8.3 86.5; 52.62 33.88 165.29 0.42 28.66
Group_I_RNA 1L8V 184A:212A A:C fS(sb:O2*-N1)_1 [tSS][-] 8.7 56.56; 89.26 32.69 160.5 1.34 23.2
Group_I_RNA 1L8V 197A:200A C:G rpS [cSS][-] 5.42 146.19; 100.78 45.41 -32.36 0.39 24.5
Group_I_RNA 1L8V 215A:260A G:C WC_Mo [cWW][XIX] 11.55 55.08; 57.89 2.82 -1.21 0.33 6.89
Group_I_RNA 1L8V 220A:253A G:U Wb [cWW][XXVIII] 10.31 40.69; 68.54 27.85 -8.97 0.55 12.49
Group_I_RNA 1L8V 221A:252A U:A WC [cWW][XX] 10.71 53.12; 56.36 3.24 -10.64 1.11 26.58
Group_I_RNA 1L8V 222A:251A C:G WC [cWW][XIX] 10.5 56.4; 52.26 4.14 -7.65 0.84 21.02
Group_I_RNA 1L8V 223A:250A C:G WC [cWW][XIX] 10.7 61.76; 50.26 11.5 -1.83 0.79 3.21
Group_I_RNA 1L8V 224A:248A U:A rH_1 [tWH][XXIV] 9.27 45.64; 12.15 33.48 124.27 0.03 20.24
Group_I_RNA 1L8V 225A:226A A:A pS [cSH][-] 6.57 149.1; 36.49 112.62 9.61 0.77 13.83
Group_I_RNA 1L8V 226A:249A A:U WC [cWW][XX] 10.71 41.18; 54.41 13.23 22.58 0.02 40.24
Group_I_RNA 1L8V 227A:247A G:U Wb [cWW][XXVIII] 10.46 43.09; 66.18 23.09 -3.08 0.18 8.44
Group_I_RNA 1L8V 228A:246A U:A WC [cWW][XX] 10.0 56.52; 62.04 5.52 -2.42 1.05 19.26
Group_I_RNA 1L8V 229A:245A C:G WC [cWW][XIX] 11.09 52.43; 56.05 3.61 -0.83 0.0 14.31
Group_I_RNA 1L8V 230A:244A A:U Wb* [---][-] 10.5 61.54; 47.6 13.94 0.63 0.83 1.88
Group_I_RNA 1L8V 231A:243A A:U WC [cWW][XX] 10.21 55.9; 54.4 1.5 -10.38 1.26 9.66
Group_I_RNA 1L8V 231A:242A A:G WC [cWW][VIII] 13.17 37.38; 43.2 5.82 19.45 2.2 8.37
Group_I_RNA 1L8V 232A:242A C:G WC [cWW][XIX] 10.32 66.19; 55.16 11.03 -5.52 1.65 3.25
Group_I_RNA 1L8V 233A:241A A:U WC [cWW][XX] 10.43 57.29; 59.68 2.39 2.91 0.06 3.42
Group_I_RNA 1L8V 234A:240A G:C WC [cWW][XIX] 11.17 52.17; 48.73 3.44 -11.28 0.14 16.03
Group_I_RNA 1L8V 235A:239A A:U WC [cWW][XX] 10.19 46.16; 62.74 16.58 -21.47 1.47 32.21
Group_I_RNA 1L8V 254A:170!B G:C WC [cWW][XIX] 10.74 51.84; 57.12 5.27 4.47 0.88 5.76
Group_I_RNA 1L8V 255A:169!B C:G WC [cWW][XIX] 10.8 52.58; 49.95 2.63 0.85 0.55 6.21
Group_I_RNA 1L8V 107!B:214!B U:A WC [cWW][XX] 11.49 49.34; 48.24 1.1 -1.73 0.47 33.83
Group_I_RNA 1L8V 108!B:213!B G:C WC [cWW][XIX] 10.57 55.1; 58.99 3.89 -7.64 0.95 9.44
Group_I_RNA 1L8V 109!B:212!B G:C WC [cWW][XIX] 10.61 55.88; 57.3 1.41 -8.79 0.12 18.6
Group_I_RNA 1L8V 109!B:184!B G:A rpS [cSS][-] 5.63 110.09; 143.72 33.63 -39.92 0.76 8.97
Group_I_RNA 1L8V 110!B:211!B G:C WC [cWW][XIX] 10.6 55.55; 53.99 1.56 -0.79 1.16 26.43
Group_I_RNA 1L8V 110!B:183!B G:A pfS(sb:O2*-N3) [---][-] 5.55 155.99; 92.17 63.82 -49.62 0.37 26.52
Group_I_RNA 1L8V 111!B:209!B G:C WC [cWW][XIX] 10.95 53.74; 55.41 1.67 -5.76 0.52 15.45
Group_I_RNA 1L8V 112!B:208!B G:C WC [cWW][XIX] 10.75 53.71; 53.36 0.35 -5.48 0.14 10.14
Group_I_RNA 1L8V 113!B:207!B A:A S [tSH][-] 9.61 86.11; 5.5 80.61 -48.29 0.15 9.0
Group_I_RNA 1L8V 114!B:206B* A:A S [tSH][-]; pS [cSH][-] 8.86 9.86; 96.06 86.2 -39.82 0.25 10.5
Group_I_RNA 1L8V 116!B:205!B G:U Wb [cWW][XXVIII] 10.31 49.11; 70.86 21.75 -1.64 0.48 22.73
Group_I_RNA 1L8V 117!B:204!B G:C WC [cWW][XIX] 11.28 50.32; 57.27 6.95 3.73 0.1 9.98
Group_I_RNA 1L8V 118!B:203!B G:C WC [cWW][XIX] 10.9 62.88; 57.78 5.1 2.88 0.04 6.38
Group_I_RNA 1L8V 119!B:202!B G:U WC [---][-] 10.48 58.15; 61.4 3.25 6.05 0.99 8.47
Group_I_RNA 1L8V 120!B:201!B U:G Wb [cWW][XXVIII] 10.69 61.78; 44.43 17.34 -1.34 0.67 6.98
Group_I_RNA 1L8V 121!B:200!B C:G WC [cWW][XIX] 11.13 49.77; 43.23 6.54 5.41 1.06 18.22
Group_I_RNA 1L8V 126!B:202!B G:U rS(ss:O2*-O2*)_1 [---][-] 5.23 101.24; 157.8 56.56 -125.29 2.42 49.69
Group_I_RNA 1L8V 126!B:196!B G:A WC [cWW][VIII] 12.8 47.37; 48.37 1.0 -11.52 0.59 25.93
Group_I_RNA 1L8V 127!B:195!B C:G WC [cWW][XIX] 10.26 53.22; 59.51 6.29 -19.8 0.92 37.24
Group_I_RNA 1L8V 128!B:194!B C:G WC [cWW][XIX] 10.68 54.18; 60.59 6.41 -13.67 0.37 19.16
Group_I_RNA 1L8V 129!B:193!B G:C WC [cWW][XIX] 10.39 53.86; 54.13 0.26 -20.53 0.84 20.95
Group_I_RNA 1L8V 131!B:192!B U:A WC [cWW][XX] 11.0 57.56; 59.17 1.6 -2.45 0.39 13.94
Group_I_RNA 1L8V 132!B:191!B C:G WC [cWW][XIX] 11.39 41.07; 55.26 14.19 5.3 0.35 9.55
Group_I_RNA 1L8V 133!B:190!B A:U WC [cWW][XX] 10.34 59.66; 57.04 2.63 -1.49 0.86 4.25
Group_I_RNA 1L8V 134!B:189!B G:C WC [cWW][XIX] 10.49 54.53; 55.51 0.98 -6.97 0.33 17.83
Group_I_RNA 1L8V 135!B:187!B U:A H_1 [cWH][XXIII] 8.25 60.13; 54.15 5.98 -5.44 0.22 6.77
Group_I_RNA 1L8V 136!B:182!B A:U WC [cWW][XX] 10.21 56.4; 58.72 2.32 -7.32 0.59 16.03
Group_I_RNA 1L8V 137!B:186!B C:A rpS(bs:O2-O2*) [cSS][-] 5.81 108.61; 145.24 36.64 -27.03 0.77 25.05
Group_I_RNA 1L8V 137!B:181!B C:G WC [cWW][XIX] 10.42 56.16; 52.93 3.23 -12.39 0.69 14.28
Group_I_RNA 1L8V 138!B:180!B C:G WC [cWW][XIX] 10.6 52.55; 50.12 2.43 -12.0 0.57 7.42
Group_I_RNA 1L8V 139!B:164!B A:G S [tSH][XI] 8.79 4.77; 108.19 103.42 14.52 1.31 28.81
Group_I_RNA 1L8V 140!B:163!B A:G S [tSH][XI] 9.43 9.74; 100.93 91.18 7.12 0.11 11.76
Group_I_RNA 1L8V 141!B:162!B G:U Wb [cWW][XXVIII] 10.41 43.67; 68.73 25.07 -9.23 0.15 18.34
Group_I_RNA 1L8V 142!B:161!B U:A WC [cWW][XX] 10.43 53.97; 57.71 3.74 -11.22 0.13 18.95
Group_I_RNA 1L8V 143!B:160!B C:G WC [cWW][XIX] 10.65 56.31; 52.57 3.73 -7.3 0.82 18.28
Group_I_RNA 1L8V 144!B:159!B U:A WC [cWW][XX] 10.52 53.53; 54.07 0.54 -5.5 0.65 16.44
Group_I_RNA 1L8V 145!B:158!B C:G WC [cWW][XIX] 10.53 55.87; 53.83 2.04 -2.75 0.18 11.07
Group_I_RNA 1L8V 146!B:157!B A:U WC [cWW][XX] 10.51 59.13; 56.94 2.2 -4.83 0.34 11.36
Group_I_RNA 1L8V 147!B:156!B G:U Wb [cWW][XXVIII] 10.26 44.78; 69.06 24.28 -1.57 0.81 4.81
Group_I_RNA 1L8V 148!B:155!B G:U Wb [cWW][XXVIII] 10.24 44.33; 69.93 25.61 -0.25 0.63 4.84
Group_I_RNA 1L8V 149!B:154!B G:C WC [cWW][XIX] 10.53 54.04; 60.26 6.22 10.14 0.07 6.02
Group_I_RNA 1L8V 150!B:153!B G:A S [tSH][XI] 9.21 96.29; 11.01 85.29 -87.61 1.09 10.98
Group_I_RNA 1L8V 150!B:152!B G:A S(sb:O2*-N7) [---][-] 7.7 89.77; 29.6 60.17 -173.8 2.02 26.09
Group_I_RNA 1L8V 152!B:224!B A:U rpS(sb:O2*-N3) [cSS][-] 5.51 97.04; 149.56 52.52 -72.89 0.29 36.51
Group_I_RNA 1L8V 153!B:250!B A:G rS [tSS][-] 8.07 64.9; 81.64 16.74 167.48 0.88 19.49
Group_I_RNA 1L8V 153!B:223!B A:C rpS(bs:O2-O2*) [cSS][-] 5.75 155.06; 108.44 46.63 -62.6 0.26 22.49
Group_I_RNA 1L8V 154!B:251!B C:G rS(ss:O2*-O2*) [---][-] 5.66 152.92; 157.39 4.48 -108.64 1.46 26.12
Group_I_RNA 1L8V 165!B:175!B C:G WC [cWW][XIX] 10.4 53.78; 56.26 2.48 -1.92 0.25 7.5
Group_I_RNA 1L8V 166!B:174!B C:G WC [cWW][XIX] 10.64 57.07; 53.61 3.46 -6.21 0.23 8.61
Group_I_RNA 1L8V 168!B:188!B U:G rH*_1 [tHW][-] 12.39 21.34; 21.63 0.29 164.17 0.15 13.0
Group_I_RNA 1L8V 171!B:172!B A:A pS [cSH][-] 6.68 149.43; 33.56 115.87 4.94 0.15 8.83
Group_I_RNA 1L8V 181!B:186!B G:A rS [tSS][-] 8.32 86.65; 54.4 32.25 162.09 0.44 38.27
Group_I_RNA 1L8V 184!B:212!B A:C fS(sb:O2*-N1)_1 [tSS][-] 8.7 56.44; 89.29 32.85 160.84 1.29 22.53
Group_I_RNA 1L8V 197!B:200!B C:G rpS [cSS][-] 5.41 146.27; 100.85 45.41 -32.38 0.37 23.9
Group_I_RNA 1L8V 215!B:260!B G:C WC_Mo [cWW][XIX] 11.54 55.21; 57.77 2.56 -0.66 0.21 6.16
Group_I_RNA 1L8V 220!B:253!B G:U Wb [cWW][XXVIII] 10.29 40.86; 68.66 27.8 -8.42 0.58 11.59
Group_I_RNA 1L8V 221!B:252!B U:A WC [cWW][XX] 10.7 53.2; 56.56 3.35 -9.18 1.24 27.11
Group_I_RNA 1L8V 222!B:251!B C:G WC [cWW][XIX] 10.52 55.82; 52.46 3.36 -8.38 0.73 20.52
Group_I_RNA 1L8V 223!B:250!B C:G WC [cWW][XIX] 10.72 61.6; 50.25 11.35 -1.23 0.77 3.31
Group_I_RNA 1L8V 224!B:248!B U:A rH_1 [tWH][XXIV] 9.28 45.57; 13.08 32.49 122.04 0.09 21.87
Group_I_RNA 1L8V 225!B:226!B A:A pS [cSH][-] 6.58 149.54; 37.05 112.49 10.48 0.85 15.41
Group_I_RNA 1L8V 226!B:249!B A:U WC [cWW][XX] 10.71 41.27; 54.24 12.97 19.92 0.13 38.86
Group_I_RNA 1L8V 227!B:247!B G:U Wb [cWW][XXVIII] 10.46 43.34; 66.03 22.69 -2.77 0.23 8.34
Group_I_RNA 1L8V 228!B:246!B U:A WC [cWW][XX] 10.0 56.33; 62.0 5.67 -1.97 1.0 19.89
Group_I_RNA 1L8V 229!B:245!B C:G WC [cWW][XIX] 11.09 52.55; 56.01 3.46 -2.05 0.07 14.4
Group_I_RNA 1L8V 230!B:244!B A:U Wb* [---][-] 10.5 61.64; 47.56 14.08 -0.15 0.92 1.31
Group_I_RNA 1L8V 231!B:243!B A:U WC [cWW][XX] 10.22 55.86; 54.43 1.43 -10.86 1.28 9.68
Group_I_RNA 1L8V 231!B:242!B A:G WC [cWW][VIII] 13.18 37.18; 43.01 5.83 18.83 2.18 8.43
Group_I_RNA 1L8V 232!B:242!B C:G WC [cWW][XIX] 10.33 66.21; 54.97 11.24 -5.97 1.69 2.98
Group_I_RNA 1L8V 233!B:241!B A:U WC [cWW][XX] 10.44 57.23; 59.73 2.51 2.85 0.04 3.08
Group_I_RNA 1L8V 234!B:240!B G:C WC [cWW][XIX] 11.16 52.23; 48.77 3.46 -11.34 0.14 16.02