Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 1MDG BPC Identified: 20 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
Misc_RNA 1MDG 2!A:2!D G:G H_1 [cWH][VI] 11.55 63.24; 27.02 36.22 3.75 0.02 2.66
Misc_RNA 1MDG 2!A:2!C G:G H_1 [cWH][VI] 11.55 27.02; 63.24 36.22 3.75 0.02 2.66
Misc_RNA 1MDG 3!A:3!D A:A fS [tSW][-] 10.38 101.85; 15.16 86.69 -132.2 0.32 13.69
Misc_RNA 1MDG 3!A:3!C A:A fS [tSW][-] 10.38 15.16; 101.85 86.69 -132.2 0.32 13.69
Misc_RNA 1MDG 4!A:4!D G:G H_1 [cWH][VI] 11.56 64.38; 27.15 37.23 9.35 0.03 10.89
Misc_RNA 1MDG 4!A:4!C G:G H_1 [cWH][VI] 11.56 27.15; 64.38 37.23 9.35 0.03 10.89
Misc_RNA 1MDG 5!A:5!D G:G H_1 [cWH][VI] 11.39 64.53; 28.05 36.48 -11.68 0.55 12.06
Misc_RNA 1MDG 5!A:5!C G:G H_1 [cWH][VI] 11.39 28.05; 64.53 36.48 -11.68 0.55 12.06
Misc_RNA 1MDG 6!A:6!D U:U H_1 [cWH][-] 9.8 31.69; 65.87 34.18 17.71 1.27 27.11
Misc_RNA 1MDG 6!A:6!C U:U H_1 [cWH][-] 9.8 65.87; 31.69 34.18 17.71 1.27 27.11
Misc_RNA 1MDG 2!B:2!D G:G H_1 [cWH][VI] 11.55 27.02; 63.24 36.22 3.75 0.02 2.66
Misc_RNA 1MDG 2!B:2!C G:G H_1 [cWH][VI] 11.55 63.24; 27.02 36.22 3.75 0.02 2.66
Misc_RNA 1MDG 3!B:3!D A:A fS [tSW][-] 10.38 15.16; 101.85 86.69 -132.2 0.32 13.69
Misc_RNA 1MDG 3!B:3!C A:A fS [tSW][-] 10.38 101.85; 15.16 86.69 -132.2 0.32 13.69
Misc_RNA 1MDG 4!B:4!D G:G H_1 [cWH][VI] 11.56 27.15; 64.38 37.23 9.35 0.03 10.89
Misc_RNA 1MDG 4!B:4!C G:G H_1 [cWH][VI] 11.56 64.38; 27.15 37.23 9.35 0.03 10.89
Misc_RNA 1MDG 5!B:5!D G:G H_1 [cWH][VI] 11.39 28.05; 64.53 36.48 -11.68 0.55 12.06
Misc_RNA 1MDG 5!B:5!C G:G H_1 [cWH][VI] 11.39 64.53; 28.05 36.48 -11.68 0.55 12.06
Misc_RNA 1MDG 6!B:6!D U:U H_1 [cWH][-] 9.8 65.87; 31.69 34.18 17.71 1.27 27.11
Misc_RNA 1MDG 6!B:6!C U:U H_1 [cWH][-] 9.8 31.69; 65.87 34.18 17.71 1.27 27.11