Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 1MME BPC Identified: 32 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
HH_ribozyme 1MME 25!A:15!B G:C WC [cWW][XIX] 10.98 46.46; 53.53 7.08 -18.0 0.02 12.13
HH_ribozyme 1MME 24!A:14!B U:A WC [cWW][XX] 11.25 56.25; 60.15 3.9 -19.79 0.25 30.31
HH_ribozyme 1MME 23!A:13!B G:C WC [cWW][XIX] 10.86 57.42; 49.88 7.54 -1.91 0.65 8.8
HH_ribozyme 1MME 22!A:12!B G:C WC_Mo [cWW][XIX] 10.57 62.58; 62.36 0.22 -0.34 0.59 6.44
HH_ribozyme 1MME 21!A:11!B U:A WC [cWW][XX] 10.58 55.91; 54.95 0.96 4.88 0.25 9.16
HH_ribozyme 1MME 80!A:130!B G:A S [tSH][XI] 8.48 108.49; 4.84 103.65 -78.53 1.68 36.61
HH_ribozyme 1MME 90!A:120!B A:G S [tSH][XI] 9.35 7.14; 89.0 81.86 -173.34 1.08 14.15
HH_ribozyme 1MME 101!A:111!B G:C WC [cWW][XIX] 10.62 47.05; 57.33 10.28 -9.49 0.17 8.62
HH_ribozyme 1MME 102!A:112!B G:C WC [cWW][XIX] 10.99 52.7; 44.07 8.62 -9.75 0.15 9.9
HH_ribozyme 1MME 103!A:113!B C:G Wb [---][-] 11.09 51.6; 42.14 9.46 -21.29 0.31 15.05
HH_ribozyme 1MME 104!A:114!B C:G WC [cWW][XIX] 11.7 41.24; 51.71 10.47 -20.84 0.1 15.27
HH_ribozyme 1MME 151!B:161!B A:U WC_mo [cWW][XX] 12.85 35.99; 30.41 5.58 -24.43 0.33 25.18
HH_ribozyme 1MME 152!B:162!B C:G WC [cWW][XIX] 10.94 48.11; 54.12 6.02 -34.89 0.62 24.95
HH_ribozyme 1MME 154!B:164!B C:G Wb [---][-] 11.22 54.23; 43.09 11.14 -9.38 0.45 12.82
HH_ribozyme 1MME 31L!B:34L!B G:A S [tSH][XI] 10.69 75.45; 19.09 56.36 -166.55 1.02 20.3
HH_ribozyme 1MME 25!C:15!D G:C Wb [---][-] 10.86 42.69; 58.61 15.92 -10.8 0.42 18.26
HH_ribozyme 1MME 24!C:14!D U:A WC [cWW][XX] 10.77 54.68; 65.55 10.88 -12.96 0.16 9.05
HH_ribozyme 1MME 23!C:13!D G:C WC [cWW][XIX] 10.55 52.58; 50.93 1.64 -7.51 0.15 12.13
HH_ribozyme 1MME 22!C:12!D G:C WC [cWW][XIX] 10.73 54.52; 50.63 3.89 -14.55 0.04 13.0
HH_ribozyme 1MME 21!C:11!D U:A WC [cWW][XX] 9.56 61.39; 64.03 2.64 1.87 0.22 2.41
HH_ribozyme 1MME 30!C:170!D C:C Wb [cWW][-] 8.59 82.48; 46.36 36.12 -9.47 0.54 21.99
HH_ribozyme 1MME 40!C:60!C U:A S(sb:O2*-N7) [---][-] 6.08 84.44; 43.34 41.1 177.88 2.49 21.5
HH_ribozyme 1MME 80!C:130!D G:A S [tSH][XI] 9.34 105.89; 10.98 94.91 -68.0 0.15 31.33
HH_ribozyme 1MME 90!C:120!D A:G S [tSH][XI] 9.36 4.9; 87.67 82.78 -140.58 0.13 24.5
HH_ribozyme 1MME 101!C:111!D G:C WC_Mo [cWW][XIX] 10.24 67.91; 61.13 6.78 -14.56 0.16 17.47
HH_ribozyme 1MME 102!C:112!D G:C WC [cWW][XIX] 10.79 51.45; 51.32 0.14 -8.3 0.29 13.35
HH_ribozyme 1MME 103!C:113!D C:G WC [cWW][XIX] 10.63 54.62; 52.53 2.09 -17.37 0.05 19.96
HH_ribozyme 1MME 104!C:114!D C:G WC [cWW][XIX] 11.22 48.22; 53.09 4.87 -14.43 0.02 12.63
HH_ribozyme 1MME 152!D:162!D C:G WC [cWW][XIX] 10.84 54.44; 54.93 0.49 -21.7 0.33 18.33
HH_ribozyme 1MME 153!D:163!D U:A WC [cWW][XX] 10.86 49.26; 54.52 5.25 -16.65 0.49 7.41
HH_ribozyme 1MME 154!D:164!D C:G Wb [---][-] 10.51 59.48; 45.9 13.58 -4.4 0.71 16.99
HH_ribozyme 1MME 31L!D:34L!D G:A S_mo [tSH][XI] 9.38 86.2; 21.36 64.84 -156.55 0.94 19.46