Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 1NUV BPC Identified: 41 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
RNA_aptamer 1NUV 19!A:49!B G:C WC [cWW][XIX] 10.63 54.19; 54.96 0.77 -12.85 0.09 15.52
RNA_aptamer 1NUV 20!A:48!B G:C WC [cWW][XIX] 10.7 52.02; 55.62 3.6 -10.05 0.1 14.64
RNA_aptamer 1NUV 21!A:47!B A:U WC [cWW][XX] 10.54 56.26; 53.04 3.21 -12.67 0.18 19.71
RNA_aptamer 1NUV 22!A:46!B C:G WC [cWW][XIX] 10.57 58.34; 52.83 5.51 -19.63 0.07 24.01
RNA_aptamer 1NUV 23!A:45!B C:A sWb [---][-] 10.85 84.34; 31.51 52.83 -5.7 0.3 24.63
RNA_aptamer 1NUV 24!A:24!G G:G rWb* [tWW][III] 13.44 31.1; 31.47 0.37 112.21 1.27 27.53
RNA_aptamer 1NUV 25!A:25!G A:A rWb* [tWW][I] 13.47 30.77; 31.35 0.58 136.71 0.88 19.08
RNA_aptamer 1NUV 27!A:43!B C:G WC [cWW][XIX] 10.67 54.85; 52.68 2.17 -5.48 0.08 14.04
RNA_aptamer 1NUV 28!A:42!B C:G WC [cWW][XIX] 10.69 54.38; 53.44 0.94 -10.53 0.01 13.52
RNA_aptamer 1NUV 29!A:41!B A:U WC [cWW][XX] 10.46 58.25; 55.56 2.7 -14.23 0.08 17.04
RNA_aptamer 1NUV 30!A:40!B G:C WC [cWW][XIX] 10.75 51.12; 53.54 2.42 -16.08 0.05 18.34
RNA_aptamer 1NUV 19!C:49!D G:C WC [cWW][XIX] 10.7 55.02; 56.26 1.24 -0.94 0.47 16.22
RNA_aptamer 1NUV 20!C:48!D G:C WC [cWW][XIX] 10.71 53.81; 54.34 0.53 -6.92 0.03 9.09
RNA_aptamer 1NUV 21!C:47!D A:U WC [cWW][XX] 10.61 55.15; 54.08 1.07 -10.46 0.04 17.6
RNA_aptamer 1NUV 22!C:46!D C:G WC [cWW][XIX] 10.59 58.02; 50.32 7.7 -19.41 0.07 26.35
RNA_aptamer 1NUV 23!C:45!D C:A sWb [---][-] 10.99 74.14; 32.48 41.66 -7.46 0.28 26.36
RNA_aptamer 1NUV 24!C:24!E G:G rS [tSS][IV] 8.45 77.68; 76.8 0.89 155.99 1.46 26.19
RNA_aptamer 1NUV 25!C:25!E A:A rS* [tHH][-] 10.96 14.82; 14.04 0.78 -102.51 0.65 23.34
RNA_aptamer 1NUV 26!C:26!E G:G rWb* [tWW][III] 13.26 29.82; 29.45 0.37 112.44 1.05 23.97
RNA_aptamer 1NUV 27!C:43!D C:G WC [cWW][XIX] 10.63 55.25; 55.9 0.64 -0.61 0.05 6.83
RNA_aptamer 1NUV 28!C:42!D C:G WC [cWW][XIX] 10.48 57.12; 56.57 0.55 -5.6 0.03 7.95
RNA_aptamer 1NUV 29!C:41!D A:U WC [cWW][XX] 10.2 60.0; 58.09 1.91 -11.2 0.22 15.33
RNA_aptamer 1NUV 30!C:40!D G:C WC [cWW][XIX] 10.49 53.35; 57.28 3.93 -10.98 0.11 14.25
RNA_aptamer 1NUV 19!E:49!F G:C WC [cWW][XIX] 10.65 55.31; 56.44 1.14 -2.0 0.45 16.3
RNA_aptamer 1NUV 20!E:48!F G:C WC [cWW][XIX] 10.72 53.29; 54.48 1.19 -7.2 0.01 8.78
RNA_aptamer 1NUV 21!E:47!F A:U WC [cWW][XX] 10.59 55.83; 53.81 2.02 -12.39 0.11 18.76
RNA_aptamer 1NUV 22!E:46!F C:G WC [cWW][XIX] 10.63 56.85; 50.15 6.71 -18.89 0.1 25.35
RNA_aptamer 1NUV 23!E:45!F C:A sWb [---][-] 11.09 74.36; 31.81 42.56 -6.79 0.34 24.14
RNA_aptamer 1NUV 27!E:43!F C:G WC [cWW][XIX] 10.61 55.87; 55.93 0.06 -2.74 0.02 4.51
RNA_aptamer 1NUV 28!E:42!F C:G WC [cWW][XIX] 10.51 57.05; 56.45 0.61 -7.36 0.01 11.33
RNA_aptamer 1NUV 29!E:41!F A:U WC [cWW][XX] 10.21 59.67; 59.13 0.54 -11.91 0.1 15.16
RNA_aptamer 1NUV 30!E:40!F G:C WC [cWW][XIX] 10.53 53.29; 57.88 4.58 -11.16 0.01 12.99
RNA_aptamer 1NUV 19!G:49!H G:C WC [cWW][XIX] 10.64 54.55; 56.03 1.47 -12.1 0.13 14.82
RNA_aptamer 1NUV 20!G:48!H G:C WC [cWW][XIX] 10.74 52.1; 55.69 3.59 -10.65 0.01 13.48
RNA_aptamer 1NUV 21!G:47!H A:U WC [cWW][XX] 10.57 55.74; 54.07 1.67 -12.89 0.28 20.72
RNA_aptamer 1NUV 22!G:46!H C:G WC [cWW][XIX] 10.64 57.36; 54.24 3.12 -18.47 0.15 23.29
RNA_aptamer 1NUV 23!G:45!H C:A sWb [---][-] 10.83 84.34; 31.48 52.86 -7.7 0.14 24.49
RNA_aptamer 1NUV 27!G:43!H C:G WC [cWW][XIX] 10.7 54.24; 52.6 1.64 -7.0 0.03 14.12
RNA_aptamer 1NUV 28!G:42!H C:G WC [cWW][XIX] 10.73 55.35; 53.18 2.18 -10.5 0.03 14.05
RNA_aptamer 1NUV 29!G:41!H A:U WC [cWW][XX] 10.44 57.94; 55.92 2.03 -14.96 0.19 17.34
RNA_aptamer 1NUV 30!G:40!H G:C WC [cWW][XIX] 10.76 51.51; 53.6 2.08 -14.84 0.11 16.21