Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 1OB5 BPC Identified: 112 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
tRNA 1OB5 1!B:72!B G:C WC [cWW][XIX] 10.44 53.74; 54.19 0.45 0.08 0.07 9.02
tRNA 1OB5 2!B:71!B C:G WC [cWW][XIX] 10.88 46.63; 54.74 8.11 -5.35 0.16 3.74
tRNA 1OB5 3!B:70!B G:C WC [cWW][XIX] 10.92 53.64; 49.34 4.3 -3.65 0.17 4.44
tRNA 1OB5 4!B:69!B G:U Wb [cWW][XXVIII] 9.91 46.63; 69.41 22.78 -8.11 0.2 10.96
tRNA 1OB5 5!B:68!B A:U WC [cWW][XX] 10.33 52.01; 58.49 6.49 -15.44 0.28 16.26
tRNA 1OB5 6!B:67!B U:A WC [cWW][XX] 10.29 59.8; 54.98 4.81 -15.46 0.3 22.18
tRNA 1OB5 7!B:66!B U:A WC [cWW][XX] 10.1 61.11; 53.46 7.65 -9.4 0.22 8.0
tRNA 1OB5 8!B:21!B U:A fS(sb:O2*-N1) [tSW][-] 8.28 90.76; 60.56 30.2 152.22 0.93 24.67
tRNA 1OB5 8!B:14!B U:A rH_1 [tWH][XXIV] 9.66 29.44; 17.87 11.57 -177.85 0.19 9.47
tRNA 1OB5 9!B:23!B A:A rS* [tHH][-] 11.12 21.34; 7.38 13.96 108.88 0.92 17.58
tRNA 1OB5 10!B:45!B G:G pS_2 [---][-] 9.09 43.1; 110.94 67.84 -11.91 0.51 26.56
tRNA 1OB5 10!B:25!B G:C Wb [---][-] 10.29 49.13; 73.62 24.49 6.52 0.65 18.57
tRNA 1OB5 11!B:24!B C:G WC [cWW][XIX] 10.67 52.02; 51.48 0.54 6.69 0.88 6.99
tRNA 1OB5 12!B:23!B U:A WC [cWW][XX] 10.78 49.16; 55.66 6.5 0.28 1.21 29.56
tRNA 1OB5 13!B:22!B C:G WC [cWW][XIX] 10.43 61.03; 55.89 5.14 5.04 1.05 22.74
tRNA 1OB5 14!B:21!B A:A pfS [cSW][-] 9.23 34.08; 120.07 85.99 -28.95 1.05 26.14
tRNA 1OB5 15!B:48!B G:C rWb [tWW][XXII] 10.47 39.58; 58.15 18.56 173.65 0.97 25.92
tRNA 1OB5 16!B:59!B U:U rWb [tWW][XIII] 8.78 44.1; 43.19 0.91 -118.83 0.1 16.68
tRNA 1OB5 18!B:55!B G:U fS_PSU [---][-] 8.58 25.06; 128.31 103.25 -124.1 0.1 19.63
tRNA 1OB5 19!B:56!B G:C WC [cWW][XIX] 10.62 54.95; 49.85 5.1 -14.4 0.17 12.36
tRNA 1OB5 20!B:57!B G:G fS_3 [---][-] 9.37 55.17; 106.14 50.97 -115.87 0.08 65.03
tRNA 1OB5 22!B:46!B G:G rH_1 [tWH][VII] 11.35 27.45; 30.94 3.49 165.68 0.2 11.88
tRNA 1OB5 26!B:44!B G:A WC [cWW][VIII] 12.94 36.94; 46.64 9.7 -4.62 0.75 26.4
tRNA 1OB5 27!B:43!B C:G WC [cWW][XIX] 9.99 62.13; 52.16 9.97 -16.78 1.13 32.49
tRNA 1OB5 28!B:42!B C:G WC [cWW][XIX] 10.9 49.52; 50.53 1.01 -3.08 0.12 7.61
tRNA 1OB5 29!B:41!B A:U WC [cWW][XX] 10.31 45.95; 58.63 12.68 -5.2 0.2 12.96
tRNA 1OB5 30!B:40!B G:C WC [cWW][XIX] 10.21 54.7; 59.68 4.99 -6.12 0.42 15.86
tRNA 1OB5 31!B:39!B A:U WC_PSU [---][-] 10.09 61.94; 75.24 13.29 8.79 0.13 7.64
tRNA 1OB5 32!B:38!B C:A sWb [---][-] 10.8 79.34; 30.51 48.83 15.28 0.73 27.01
tRNA 1OB5 33!B:35!B U:A S(sb:O2*-N7) [---][-] 6.8 78.5; 44.59 33.91 -176.84 0.73 43.72
tRNA 1OB5 49!B:65!B C:G WC [cWW][XIX] 10.58 53.62; 57.04 3.42 -4.31 0.06 3.1
tRNA 1OB5 50!B:64!B U:A WC [cWW][XX] 10.58 59.16; 53.47 5.69 -12.38 0.28 12.34
tRNA 1OB5 51!B:63!B G:C WC [cWW][XIX] 10.41 56.93; 56.84 0.08 -21.79 0.17 17.57
tRNA 1OB5 52!B:62!B U:A WC [cWW][XX] 10.36 56.13; 60.3 4.18 -19.7 0.05 19.36
tRNA 1OB5 53!B:61!B G:C WC [cWW][XIX] 10.66 53.57; 51.41 2.16 -13.18 0.4 17.81
tRNA 1OB5 54!B:58!B U:A rH_1 [tWH][XXIV] 9.65 35.19; 16.08 19.1 -177.51 0.07 0.99
tRNA 1OB5 55!B:57!B U:G S_PSU(sb:O2*-N7) [---][-] 6.23 91.82; 41.35 50.47 -176.52 1.98 26.73
tRNA 1OB5 1!D:72!D G:C WC [cWW][XIX] 10.44 53.73; 54.19 0.46 0.07 0.07 9.02
tRNA 1OB5 2!D:71!D C:G WC [cWW][XIX] 10.88 46.66; 54.76 8.1 -5.34 0.16 3.75
tRNA 1OB5 3!D:70!D G:C WC [cWW][XIX] 10.92 53.65; 49.34 4.31 -3.64 0.17 4.43
tRNA 1OB5 4!D:69!D G:U Wb [cWW][XXVIII] 9.91 46.63; 69.42 22.79 -8.07 0.2 10.98
tRNA 1OB5 5!D:68!D A:U WC [cWW][XX] 10.33 52.02; 58.51 6.49 -15.43 0.28 16.27
tRNA 1OB5 6!D:67!D U:A WC [cWW][XX] 10.29 59.82; 54.95 4.86 -15.43 0.3 22.18
tRNA 1OB5 7!D:66!D U:A WC [cWW][XX] 10.1 61.13; 53.47 7.66 -9.39 0.22 8.02
tRNA 1OB5 8!D:21!D U:A fS(sb:O2*-N1) [tSW][-] 8.28 90.77; 60.55 30.22 152.22 0.93 24.68
tRNA 1OB5 8!D:14!D U:A rH_1 [tWH][XXIV] 9.66 29.45; 17.85 11.6 -177.8 0.19 9.48
tRNA 1OB5 9!D:23!D A:A rS* [tHH][-] 11.12 21.33; 7.36 13.97 108.78 0.92 17.58
tRNA 1OB5 10!D:45!D G:G pS_2 [---][-] 9.09 43.1; 110.94 67.84 -11.91 0.51 26.57
tRNA 1OB5 10!D:25!D G:C Wb [---][-] 10.29 49.12; 73.65 24.53 6.56 0.65 18.58
tRNA 1OB5 11!D:24!D C:G WC [cWW][XIX] 10.67 51.99; 51.49 0.5 6.66 0.88 6.97
tRNA 1OB5 12!D:23!D U:A WC [cWW][XX] 10.78 49.16; 55.68 6.52 0.3 1.21 29.59
tRNA 1OB5 13!D:22!D C:G WC [cWW][XIX] 10.43 61.0; 55.88 5.12 5.05 1.05 22.74
tRNA 1OB5 14!D:21!D A:A pfS [cSW][-] 9.23 34.09; 120.06 85.97 -28.97 1.05 26.13
tRNA 1OB5 15!D:48!D G:C rWb [tWW][XXII] 10.47 39.57; 58.13 18.56 173.57 0.97 25.91
tRNA 1OB5 16!D:59!D U:U rWb [tWW][XIII] 8.78 44.1; 43.17 0.93 -118.85 0.1 16.68
tRNA 1OB5 18!D:55!D G:U fS_PSU [---][-] 8.58 25.02; 128.32 103.3 -124.11 0.1 19.62
tRNA 1OB5 19!D:56!D G:C WC [cWW][XIX] 10.62 54.95; 49.85 5.1 -14.35 0.17 12.37
tRNA 1OB5 20!D:57!D G:G fS_3 [---][-] 9.37 55.17; 106.15 50.98 -115.88 0.08 65.04
tRNA 1OB5 22!D:46!D G:G rH_1 [tWH][VII] 11.35 27.46; 30.95 3.49 165.66 0.2 11.87
tRNA 1OB5 26!D:44!D G:A WC [cWW][VIII] 12.94 36.96; 46.64 9.68 -4.64 0.75 26.39
tRNA 1OB5 27!D:43!D C:G WC [cWW][XIX] 9.99 62.15; 52.14 10.01 -16.8 1.13 32.49
tRNA 1OB5 28!D:42!D C:G WC [cWW][XIX] 10.9 49.51; 50.54 1.03 -3.05 0.12 7.59
tRNA 1OB5 29!D:41!D A:U WC [cWW][XX] 10.31 45.94; 58.61 12.68 -5.22 0.2 12.96
tRNA 1OB5 30!D:40!D G:C WC [cWW][XIX] 10.21 54.7; 59.67 4.97 -6.15 0.42 15.86
tRNA 1OB5 31!D:39!D A:U WC_PSU [---][-] 10.09 61.93; 75.24 13.31 8.77 0.14 7.65
tRNA 1OB5 32!D:38!D C:A sWb [---][-] 10.8 79.36; 30.52 48.84 15.2 0.73 27.02
tRNA 1OB5 33!D:35!D U:A S(sb:O2*-N7) [---][-] 6.8 78.49; 44.57 33.92 -176.83 0.73 43.71
tRNA 1OB5 34!D:57!F G:G pS(sb:O2*-O6) [---][-] 8.76 26.26; 137.26 111.0 109.8 2.69 68.02
tRNA 1OB5 49!D:65!D C:G WC [cWW][XIX] 10.58 53.63; 57.06 3.42 -4.33 0.06 3.08
tRNA 1OB5 50!D:64!D U:A WC [cWW][XX] 10.58 59.15; 53.47 5.68 -12.4 0.28 12.33
tRNA 1OB5 51!D:63!D G:C WC [cWW][XIX] 10.41 56.93; 56.86 0.07 -21.76 0.17 17.57
tRNA 1OB5 52!D:62!D U:A WC [cWW][XX] 10.36 56.16; 60.34 4.19 -19.66 0.05 19.37
tRNA 1OB5 53!D:61!D G:C WC [cWW][XIX] 10.66 53.54; 51.39 2.14 -13.21 0.4 17.81
tRNA 1OB5 54!D:58!D U:A rH_1 [tWH][XXIV] 9.65 35.18; 16.1 19.07 -177.4 0.07 0.98
tRNA 1OB5 55!D:57!D U:G S_PSU(sb:O2*-N7) [---][-] 6.23 91.82; 41.35 50.47 -176.55 1.99 26.72
tRNA 1OB5 1!F:72!F G:C WC [cWW][XIX] 10.44 53.71; 54.18 0.47 0.07 0.07 9.02
tRNA 1OB5 2!F:71!F C:G WC [cWW][XIX] 10.89 46.6; 54.75 8.15 -5.37 0.16 3.71
tRNA 1OB5 3!F:70!F G:C WC [cWW][XIX] 10.92 53.64; 49.34 4.3 -3.65 0.17 4.44
tRNA 1OB5 4!F:69!F G:U Wb [cWW][XXVIII] 9.91 46.65; 69.4 22.74 -8.12 0.2 10.93
tRNA 1OB5 5!F:68!F A:U WC [cWW][XX] 10.33 52.02; 58.47 6.46 -15.48 0.28 16.25
tRNA 1OB5 6!F:67!F U:A WC [cWW][XX] 10.29 59.81; 55.0 4.81 -15.45 0.3 22.17
tRNA 1OB5 7!F:66!F U:A WC [cWW][XX] 10.1 61.09; 53.45 7.64 -9.38 0.22 8.01
tRNA 1OB5 8!F:21!F U:A fS(sb:O2*-N1) [tSW][-] 8.28 90.77; 60.53 30.24 152.22 0.93 24.67
tRNA 1OB5 8!F:14!F U:A rH_1 [tWH][XXIV] 9.66 29.45; 17.85 11.6 -177.78 0.19 9.47
tRNA 1OB5 9!F:23!F A:A rS* [tHH][-] 11.12 21.35; 7.38 13.98 109.08 0.92 17.6
tRNA 1OB5 10!F:45!F G:G pS_2 [---][-] 9.09 43.08; 110.96 67.87 -11.92 0.51 26.58
tRNA 1OB5 10!F:25!F G:C Wb [---][-] 10.29 49.13; 73.62 24.49 6.59 0.65 18.57
tRNA 1OB5 11!F:24!F C:G WC [cWW][XIX] 10.67 52.01; 51.46 0.55 6.72 0.88 6.99
tRNA 1OB5 12!F:23!F U:A WC [cWW][XX] 10.78 49.13; 55.64 6.51 0.24 1.2 29.56
tRNA 1OB5 13!F:22!F C:G WC [cWW][XIX] 10.43 61.04; 55.92 5.13 5.07 1.05 22.74
tRNA 1OB5 14!F:21!F A:A pfS [cSW][-] 9.23 34.1; 120.04 85.94 -28.97 1.05 26.14
tRNA 1OB5 15!F:48!F G:C rWb [tWW][XXII] 10.47 39.58; 58.13 18.55 173.67 0.97 25.94
tRNA 1OB5 16!F:59!F U:U rWb [tWW][XIII] 8.78 44.09; 43.19 0.9 -118.8 0.1 16.71
tRNA 1OB5 18!F:55!F G:U fS_PSU [---][-] 8.58 25.09; 128.3 103.21 -124.07 0.09 19.64
tRNA 1OB5 19!F:56!F G:C WC [cWW][XIX] 10.62 54.93; 49.85 5.08 -14.41 0.17 12.38
tRNA 1OB5 20!F:57!F G:G fS_3 [---][-] 9.37 55.17; 106.14 50.97 -115.87 0.08 65.04
tRNA 1OB5 22!F:46!F G:G rH_1 [tWH][VII] 11.35 27.42; 30.95 3.52 165.64 0.2 11.88
tRNA 1OB5 26!F:44!F G:A WC [cWW][VIII] 12.94 36.95; 46.66 9.71 -4.57 0.75 26.37
tRNA 1OB5 27!F:43!F C:G WC [cWW][XIX] 9.99 62.14; 52.16 9.98 -16.8 1.12 32.47
tRNA 1OB5 28!F:42!F C:G WC [cWW][XIX] 10.9 49.53; 50.55 1.02 -3.14 0.12 7.63
tRNA 1OB5 29!F:41!F A:U WC [cWW][XX] 10.31 45.94; 58.62 12.68 -5.23 0.2 12.97
tRNA 1OB5 30!F:40!F G:C WC [cWW][XIX] 10.22 54.7; 59.67 4.97 -6.12 0.42 15.87
tRNA 1OB5 31!F:39!F A:U WC_PSU [---][-] 10.09 61.93; 75.24 13.31 8.8 0.13 7.65
tRNA 1OB5 32!F:38!F C:A sWb [---][-] 10.8 79.33; 30.49 48.84 15.24 0.73 27.01
tRNA 1OB5 33!F:35!F U:A S(sb:O2*-N7) [---][-] 6.8 78.5; 44.58 33.92 -176.85 0.73 43.72
tRNA 1OB5 49!F:65!F C:G WC [cWW][XIX] 10.58 53.6; 57.05 3.45 -4.31 0.06 3.1
tRNA 1OB5 50!F:64!F U:A WC [cWW][XX] 10.58 59.16; 53.48 5.68 -12.37 0.28 12.32
tRNA 1OB5 51!F:63!F G:C WC [cWW][XIX] 10.41 56.91; 56.86 0.06 -21.82 0.17 17.54
tRNA 1OB5 52!F:62!F U:A WC [cWW][XX] 10.36 56.15; 60.28 4.13 -19.7 0.05 19.36
tRNA 1OB5 53!F:61!F G:C WC [cWW][XIX] 10.66 53.58; 51.4 2.17 -13.23 0.4 17.8
tRNA 1OB5 54!F:58!F U:A rH_1 [tWH][XXIV] 9.65 35.19; 16.07 19.12 -177.61 0.07 1.0
tRNA 1OB5 55!F:57!F U:G S_PSU(sb:O2*-N7) [---][-] 6.23 91.81; 41.35 50.47 -176.51 1.98 26.74