Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 1OOA BPC Identified: 23 Ambiguities: 1
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
RNA_aptamer 1OOA 1!C:29!C C:G Wb [---][-] 10.25 69.59; 54.92 14.67 -16.39 0.13 17.88
RNA_aptamer 1OOA 2!C:28!C A:U Wb [---][-] 10.2 45.54; 70.26 24.72 -12.88 0.41 18.55
RNA_aptamer 1OOA 3!C:27!C U:A Wb* [---][-] 11.17 38.48; 64.26 25.78 -13.7 0.57 37.7
RNA_aptamer 1OOA 4!C:26!C* A:U WC [cWW][XX]; Wb* [---][-] 10.54 62.14; 50.06 12.08 -5.22 0.07 11.4
RNA_aptamer 1OOA 5!C:25!C C:G WC [cWW][XIX] 10.79 55.88; 48.8 7.08 -3.48 0.17 6.94
RNA_aptamer 1OOA 6!C:24!C U:C sWC [---][-] 10.46 81.29; 8.36 72.94 34.23 0.24 13.23
RNA_aptamer 1OOA 10!C:21!C A:U WC [cWW][XX] 9.76 58.95; 68.75 9.8 4.31 1.93 32.79
RNA_aptamer 1OOA 11!C:20!C A:U WC [cWW][XX] 10.4 57.66; 52.55 5.11 -5.29 0.58 11.0
RNA_aptamer 1OOA 12!C:19!C C:G WC [cWW][XIX] 10.65 57.13; 52.8 4.33 -11.63 0.38 12.46
RNA_aptamer 1OOA 13!C:18!C U:G Wb [cWW][XXVIII] 10.35 69.02; 42.74 26.28 -6.86 0.47 10.19
RNA_aptamer 1OOA 14!C:17!C G:A S [tSH][XI] 8.53 117.73; 25.95 91.78 -27.67 0.76 33.72
RNA_aptamer 1OOA 1!D:29!D C:G WC [cWW][XIX] 10.74 53.8; 53.04 0.76 0.63 0.43 11.28
RNA_aptamer 1OOA 2!D:28!D A:U WC [cWW][XX] 10.69 52.79; 53.34 0.55 -8.02 0.06 16.8
RNA_aptamer 1OOA 3!D:27!D U:A WC [cWW][XX] 10.58 52.21; 56.22 4.02 -18.81 0.12 27.01
RNA_aptamer 1OOA 4!D:26!D A:U WC [cWW][XX] 10.38 58.57; 55.91 2.67 -11.6 0.58 13.84
RNA_aptamer 1OOA 5!D:25!D C:G WC [cWW][XIX] 10.85 52.77; 52.9 0.13 -8.8 0.06 12.13
RNA_aptamer 1OOA 6!D:24!D U:C sWC [---][-] 10.34 81.18; 6.16 75.02 -2.05 0.99 15.39
RNA_aptamer 1OOA 10!D:21!D A:U WC [cWW][XX] 10.1 58.75; 60.31 1.56 6.32 0.41 17.85
RNA_aptamer 1OOA 11!D:20!D A:U WC [cWW][XX] 10.27 57.53; 57.31 0.22 -4.55 0.05 7.29
RNA_aptamer 1OOA 12!D:19!D C:G WC [cWW][XIX] 10.64 55.98; 53.98 2.0 -8.35 0.02 13.71
RNA_aptamer 1OOA 13!D:18!D U:G Wb [cWW][XXVIII] 10.81 65.09; 46.07 19.02 0.95 0.7 16.98
RNA_aptamer 1OOA 14!D:18!D G:G pS_1 [cSH][-] 8.68 122.53; 46.55 75.98 -34.65 0.36 56.77
RNA_aptamer 1OOA 14!D:17!D G:A pfS_2 [cSW][-] 9.39 114.75; 26.16 88.59 -43.45 1.19 66.12