Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 1P6V BPC Identified: 22 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
tmRNA 1P6V 20!B:37!B C:G WC [cWW][XIX] 10.66 53.3; 55.1 1.8 0.21 0.32 8.65
tmRNA 1P6V 21!B:36!B G:C WC [cWW][XIX] 10.4 52.14; 59.84 7.7 -4.34 0.33 11.07
tmRNA 1P6V 22!B:35!B G:U Wb [cWW][XXVIII] 10.21 42.93; 69.24 26.3 -5.4 0.11 21.63
tmRNA 1P6V 23!B:34!B G:C WC [cWW][XIX] 10.42 54.68; 56.03 1.35 -6.06 0.14 9.82
tmRNA 1P6V 24!B:33!B G:C WC [cWW][XIX] 10.43 58.36; 61.27 2.91 -2.13 0.19 11.7
tmRNA 1P6V 25!B:32!B A:U WC [cWW][XX] 10.43 54.64; 61.83 7.2 1.63 0.93 24.05
tmRNA 1P6V 26!B:31!B C:G WC [cWW][XIX] 10.24 62.99; 49.44 13.55 4.53 0.5 11.63
tmRNA 1P6V 27!B:30!B U:G S [---][-] 9.51 87.35; 6.14 81.21 12.8 0.75 27.9
tmRNA 1P6V 41!B:57!B G:C WC [cWW][XIX] 11.19 50.26; 44.56 5.7 -32.46 1.22 27.17
tmRNA 1P6V 42!B:56!B C:G Wb [---][-] 10.91 58.65; 34.73 23.92 -12.29 0.14 25.16
tmRNA 1P6V 43!B:55!B G:C WC [cWW][XIX] 11.08 50.64; 54.18 3.54 -5.34 0.01 13.5
tmRNA 1P6V 44!B:54!B G:C WC [cWW][XIX] 10.9 41.35; 52.18 10.83 -4.46 0.06 7.86
tmRNA 1P6V 45!B:53!B G:C WC [cWW][XIX] 11.13 52.23; 40.81 11.41 14.22 0.04 28.2
tmRNA 1P6V 47!B:49!B U:G S(sb:O2*-N7)_1 [---][-] 6.81 83.03; 39.8 43.22 179.51 0.89 41.98
tmRNA 1P6V 20!D:37!D C:G WC [cWW][XIX] 10.67 53.2; 54.92 1.72 0.12 0.34 8.96
tmRNA 1P6V 21!D:36!D G:C WC [cWW][XIX] 10.4 52.15; 59.72 7.58 -2.74 0.37 10.69
tmRNA 1P6V 22!D:35!D G:U Wb [cWW][XXVIII] 10.2 43.14; 69.34 26.21 -4.77 0.15 21.85
tmRNA 1P6V 23!D:34!D G:C WC [cWW][XIX] 10.42 54.71; 56.27 1.55 -5.28 0.22 9.89
tmRNA 1P6V 24!D:33!D G:C WC [cWW][XIX] 10.45 58.63; 61.12 2.49 -1.18 0.2 12.58
tmRNA 1P6V 25!D:32!D A:U WC [cWW][XX] 10.44 54.86; 61.8 6.95 3.59 0.97 25.89
tmRNA 1P6V 26!D:31!D C:G WC [cWW][XIX] 10.24 63.31; 49.66 13.65 4.36 0.54 12.17
tmRNA 1P6V 27!D:30!D U:G S [---][-] 9.51 87.43; 6.07 81.36 12.45 0.74 27.68