Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 1Q29 BPC Identified: 17 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
HH_ribozyme 1Q29 10!A:26!A G:C WC [cWW][XIX] 11.01 50.7; 52.76 2.06 -14.0 0.65 23.97
HH_ribozyme 1Q29 11!A:125!B G:C WC [cWW][XIX] 11.27 58.11; 51.31 6.8 -16.88 0.2 23.65
HH_ribozyme 1Q29 12!A:124!B U:A WC [cWW][XX] 10.97 56.82; 54.31 2.51 -12.75 0.12 13.91
HH_ribozyme 1Q29 13!A:123!B G:C WC [cWW][XIX] 10.86 55.61; 50.32 5.28 -9.98 0.09 12.36
HH_ribozyme 1Q29 14!A:122!B G:C WC [cWW][XIX] 10.69 55.68; 53.07 2.61 -9.36 0.33 21.05
HH_ribozyme 1Q29 15!A:121!B U:A WC [cWW][XX] 10.8 54.76; 49.62 5.14 -9.67 0.15 13.45
HH_ribozyme 1Q29 17!A:19!A U:A S(sb:O2*-N7) [---][-] 6.4 83.74; 48.63 35.11 -179.82 1.35 17.4
HH_ribozyme 1Q29 20!A:107!B U:A pfS [cSW][-] 9.73 117.7; 36.56 81.14 0.18 0.4 13.66
HH_ribozyme 1Q29 21!A:106!B G:A S [tSH][XI] 9.38 103.43; 6.68 96.75 -27.58 1.05 31.68
HH_ribozyme 1Q29 22!A:105!B A:G S [tSH][XI] 9.54 6.4; 96.13 89.73 -47.05 0.56 18.99
HH_ribozyme 1Q29 23!A:104!B G:C WC [cWW][XIX] 10.7 56.32; 56.01 0.31 -7.4 0.13 13.88
HH_ribozyme 1Q29 24!A:103!B G:C WC [cWW][XIX] 10.86 54.73; 50.29 4.44 -10.39 0.16 15.93
HH_ribozyme 1Q29 25!A:102!B C:G WC [cWW][XIX] 11.22 52.61; 48.96 3.65 -8.13 0.09 10.62
HH_ribozyme 1Q29 109!B:118!B C:G WC [cWW][XIX] 11.17 52.31; 49.75 2.55 -17.54 0.21 19.08
HH_ribozyme 1Q29 110!B:117!B U:A WC [cWW][XX] 10.71 51.62; 59.27 7.65 -9.71 0.09 10.93
HH_ribozyme 1Q29 111!B:116!B C:G WC [cWW][XIX] 10.41 56.79; 56.23 0.56 -3.66 0.72 19.0
HH_ribozyme 1Q29 112!B:115!B G:A S_mo [tSH][XI] 9.85 80.69; 18.91 61.79 -163.16 0.93 19.07