Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 1Q2R
BPC Identified: 13
Ambiguities: 0
| tRNA |
1Q2R |
25!E:25!F |
A:A |
rS* [tHH][-] |
11.09 |
3.55; 13.75 |
10.21 |
-169.07 |
0.64 |
20.97 |
| tRNA |
1Q2R |
26!E:44!E |
G:C |
WC [cWW][XIX] |
10.8 |
53.09; 53.51 |
0.42 |
-8.36 |
0.43 |
7.2 |
| tRNA |
1Q2R |
27!E:43!E |
C:G |
WC [cWW][XIX] |
10.63 |
54.17; 55.44 |
1.27 |
-10.93 |
0.09 |
16.79 |
| tRNA |
1Q2R |
28!E:42!E |
A:U |
WC [cWW][XX] |
10.64 |
55.1; 55.55 |
0.45 |
-4.77 |
0.13 |
11.32 |
| tRNA |
1Q2R |
29!E:41!E |
C:G |
WC [cWW][XIX] |
10.69 |
54.87; 54.48 |
0.39 |
-1.94 |
0.07 |
7.41 |
| tRNA |
1Q2R |
30!E:40!E |
G:C |
WC [cWW][XIX] |
10.41 |
54.34; 57.32 |
2.98 |
-8.14 |
0.19 |
12.71 |
| tRNA |
1Q2R |
31!E:39!E |
G:C |
WC [cWW][XIX] |
10.48 |
55.63; 55.61 |
0.01 |
-15.33 |
0.15 |
15.98 |
| tRNA |
1Q2R |
26!F:44!F |
G:C |
WC [cWW][XIX] |
10.87 |
53.0; 52.49 |
0.51 |
-9.81 |
0.09 |
13.68 |
| tRNA |
1Q2R |
27!F:43!F |
C:G |
WC [cWW][XIX] |
10.59 |
55.27; 54.66 |
0.62 |
-11.35 |
0.02 |
16.65 |
| tRNA |
1Q2R |
28!F:42!F |
A:U |
WC [cWW][XX] |
10.48 |
54.42; 56.46 |
2.04 |
-5.42 |
0.01 |
7.88 |
| tRNA |
1Q2R |
29!F:41!F |
C:G |
WC [cWW][XIX] |
10.81 |
52.19; 54.13 |
1.94 |
-2.53 |
0.18 |
7.38 |
| tRNA |
1Q2R |
30!F:40!F |
G:C |
WC [cWW][XIX] |
10.63 |
53.28; 54.77 |
1.49 |
-6.25 |
0.33 |
4.82 |
| tRNA |
1Q2R |
31!F:39!F |
G:C |
WC [cWW][XIX] |
10.55 |
54.16; 54.42 |
0.26 |
-18.21 |
0.03 |
15.46 |