Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 1Q93 BPC Identified: 48 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
rRNA 1Q93 2!A:28!A G:C WC [cWW][XIX] 10.56 53.41; 54.36 0.95 -2.49 0.21 6.94
rRNA 1Q93 3!A:27!A G:C WC [cWW][XIX] 10.58 53.99; 56.78 2.79 -11.66 0.42 17.19
rRNA 1Q93 4!A:26!A U:A WC [cWW][XX] 10.36 57.24; 55.5 1.74 -12.02 0.1 12.28
rRNA 1Q93 5!A:25!A G:C WC [cWW][XIX] 10.6 55.08; 55.14 0.05 -6.65 0.03 10.37
rRNA 1Q93 6!A:24!A C:G WC [cWW][XIX] 10.5 56.72; 52.97 3.75 -10.88 0.19 14.95
rRNA 1Q93 7!A:23!A U:C sWC [---][-] 10.72 78.79; 12.96 65.83 14.64 0.07 24.19
rRNA 1Q93 8!A:22!A C:C S [---][-] 9.06 100.69; 4.36 96.33 66.77 0.56 20.81
rRNA 1Q93 9!A:21!A A:A rS* [tHH][-] 10.96 9.22; 16.63 7.42 -92.0 1.03 20.66
rRNA 1Q93 10!A:20!A G:A S(bp:N1-O2P)_3 [---][-] 10.8 83.45; 61.23 22.22 -162.84 0.28 17.32
rRNA 1Q93 10!A:11!A G:U pS* [cHS][-] 6.67 144.28; 52.7 91.57 13.37 0.64 13.28
rRNA 1Q93 11!A:20!A U:A rH_1 [tWH][XXIV] 9.67 27.86; 24.38 3.48 -158.67 0.96 22.5
rRNA 1Q93 12!A:19!A A:G S [tSH][XI] 9.51 8.59; 99.31 90.71 -4.96 0.12 6.52
rRNA 1Q93 13!A:18!A G:C WC [cWW][XIX] 10.56 53.79; 55.88 2.09 1.11 0.16 4.16
rRNA 1Q93 14!A:17!A G:A S [tSH][XI] 9.22 98.13; 10.47 87.66 -79.98 0.09 20.48
rRNA 1Q93 14!A:16!A G:G S(sb:O2*-N7)_1 [---][-] 7.64 91.53; 29.9 61.62 -167.68 2.31 30.58
rRNA 1Q93 15!A:16!C A:G pfS_1 [---][-] 5.77 92.95; 139.48 46.53 -43.88 0.61 13.14
rRNA 1Q93 16!A:16!C G:G rpS [cSS][-] 3.89 144.12; 116.21 27.9 92.32 2.05 7.87
rRNA 1Q93 16!A:15!C G:A pfS(sb:O2*-N3) [---][-] 5.99 148.95; 89.71 59.24 -56.39 0.44 19.03
rRNA 1Q93 2!B:28!B G:C WC [cWW][XIX] 10.77 52.55; 53.88 1.34 -6.7 0.25 9.67
rRNA 1Q93 3!B:27!B G:C WC [cWW][XIX] 10.58 50.63; 56.17 5.54 -11.51 0.28 14.07
rRNA 1Q93 4!B:26!B U:A WC [cWW][XX] 10.83 51.21; 53.24 2.03 -10.58 0.04 13.25
rRNA 1Q93 5!B:25!B G:C WC [cWW][XIX] 10.64 54.81; 54.94 0.13 -7.76 0.01 12.83
rRNA 1Q93 6!B:24!B C:G WC [cWW][XIX] 10.61 56.58; 53.84 2.75 -7.43 0.42 14.59
rRNA 1Q93 7!B:23!B U:C sWC [---][-] 10.83 79.01; 19.3 59.72 15.73 0.68 23.05
rRNA 1Q93 8!B:22!B C:C S [---][-] 8.99 103.29; 6.05 97.25 82.09 0.21 20.07
rRNA 1Q93 9!B:21!B A:A rS* [tHH][-] 10.95 9.47; 15.75 6.28 -113.04 0.65 15.63
rRNA 1Q93 10!B:20!B G:A S(bp:N1-O2P)_3 [---][-] 10.64 79.6; 60.53 19.06 -168.75 0.04 9.52
rRNA 1Q93 10!B:11!B G:U pS* [cHS][-] 6.53 142.3; 51.62 90.68 9.51 0.28 9.94
rRNA 1Q93 11!B:20!B U:A rH_1 [tWH][XXIV] 9.65 28.1; 23.71 4.39 -168.37 0.39 11.41
rRNA 1Q93 12!B:19!B A:G S [tSH][XI] 9.31 8.28; 101.34 93.06 -2.69 0.21 5.95
rRNA 1Q93 13!B:18!B G:C WC [cWW][XIX] 10.45 56.21; 56.6 0.4 0.39 0.31 7.11
rRNA 1Q93 14!B:17!B G:A S [tSH][XI] 8.92 95.68; 12.09 83.58 -95.16 0.19 20.78
rRNA 1Q93 14!B:16!B G:G S(sb:O2*-N7)_1 [---][-] 7.51 87.56; 33.98 53.57 179.01 2.7 24.39
rRNA 1Q93 28!B:20!C C:A rS(ss:O2*-O2*)_2 [---][-] 6.21 155.94; 148.38 7.56 -107.3 0.45 23.66
rRNA 1Q93 2!C:28!C G:C WC [cWW][XIX] 10.71 52.89; 54.78 1.89 -4.33 0.2 8.12
rRNA 1Q93 3!C:27!C G:C WC [cWW][XIX] 10.58 53.05; 56.24 3.18 -11.13 0.4 13.78
rRNA 1Q93 4!C:26!C U:A WC [cWW][XX] 10.43 58.59; 55.64 2.95 -8.59 0.03 8.56
rRNA 1Q93 5!C:25!C G:C WC [cWW][XIX] 10.66 52.67; 55.19 2.52 -7.2 0.17 11.95
rRNA 1Q93 6!C:24!C C:G WC [cWW][XIX] 10.48 56.39; 53.52 2.87 -8.84 0.35 14.34
rRNA 1Q93 7!C:23!C U:C sWC [---][-] 10.79 81.86; 19.51 62.35 19.32 0.93 17.73
rRNA 1Q93 8!C:22!C C:C S [---][-] 9.11 101.98; 5.75 96.23 64.84 0.2 19.45
rRNA 1Q93 9!C:21!C A:A rS* [tHH][-] 11.16 7.54; 13.45 5.91 -135.15 0.7 13.8
rRNA 1Q93 10!C:11!C G:U pS* [cHS][-] 6.54 142.75; 53.53 89.22 11.47 0.44 12.29
rRNA 1Q93 11!C:20!C U:A rH_1 [tWH][XXIV] 9.66 28.59; 22.02 6.58 -170.48 0.21 8.59
rRNA 1Q93 12!C:19!C A:G S [tSH][XI] 9.32 7.86; 99.54 91.68 -7.35 0.57 12.41
rRNA 1Q93 13!C:18!C G:C WC [cWW][XIX] 10.48 52.65; 55.12 2.47 0.57 0.08 3.18
rRNA 1Q93 14!C:17!C G:A S [tSH][XI] 9.91 87.96; 12.64 75.32 -124.22 0.25 14.89
rRNA 1Q93 14!C:16!C G:G S(sb:O2*-N7)_1 [---][-] 7.48 84.51; 33.55 50.96 -174.34 2.39 26.48