Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 1Q96 BPC Identified: 41 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
rRNA 1Q96 2!A:28!A G:C WC [cWW][XIX] 10.64 53.92; 55.5 1.58 -3.99 0.27 9.67
rRNA 1Q96 3!A:27!A G:C WC [cWW][XIX] 10.52 54.09; 56.6 2.52 -8.93 0.29 17.1
rRNA 1Q96 4!A:26!A U:A WC [cWW][XX] 10.4 57.65; 55.78 1.88 -8.64 0.02 10.19
rRNA 1Q96 5!A:25!A G:C WC [cWW][XIX] 10.58 54.92; 55.45 0.53 -7.43 0.03 11.27
rRNA 1Q96 6!A:24!A C:G WC [cWW][XIX] 10.61 56.44; 53.4 3.04 -9.89 0.36 15.93
rRNA 1Q96 7!A:23!A U:C sWC [---][-] 10.65 81.03; 15.73 65.3 13.16 0.24 20.61
rRNA 1Q96 8!A:22!A C:C S [---][-] 9.09 101.83; 4.66 97.17 92.11 0.48 20.18
rRNA 1Q96 9!A:21!A A:A rS* [tHH][-] 11.04 10.79; 14.59 3.8 -107.93 0.98 19.19
rRNA 1Q96 10!A:20!A G:A S(bp:N1-O2P)_3 [---][-] 10.81 84.14; 60.37 23.77 -163.27 0.39 13.42
rRNA 1Q96 10!A:11!A G:U pS* [cHS][-] 6.74 144.51; 52.38 92.13 12.05 0.41 9.76
rRNA 1Q96 11!A:20!A U:A rH_1 [tWH][XXIV] 9.6 28.47; 23.3 5.16 -157.61 0.67 16.98
rRNA 1Q96 12!A:19!A A:G S [tSH][XI] 9.47 8.78; 99.75 90.97 -9.16 0.2 6.51
rRNA 1Q96 13!A:18!A U:A WC [cWW][XX] 10.51 56.47; 57.03 0.57 -3.61 0.23 7.23
rRNA 1Q96 14!A:17!A G:A S [tSH][XI] 9.24 98.62; 9.39 89.23 -79.33 0.33 21.57
rRNA 1Q96 14!A:16!A G:G S(sb:O2*-N7)_1 [---][-] 7.68 92.54; 30.51 62.03 -168.76 2.32 30.57
rRNA 1Q96 15!A:16!C A:G pfS_1 [---][-] 5.7 90.85; 143.75 52.9 -46.72 0.6 14.15
rRNA 1Q96 16!A:15!C G:A pfS(sb:O2*-N3) [---][-] 5.76 149.52; 91.25 58.27 -61.23 0.23 22.63
rRNA 1Q96 2!B:28!B G:C WC [cWW][XIX] 10.71 52.36; 55.21 2.85 -8.09 0.05 9.11
rRNA 1Q96 3!B:27!B G:C WC [cWW][XIX] 10.66 52.69; 56.23 3.54 -13.92 0.25 15.79
rRNA 1Q96 4!B:26!B U:A WC [cWW][XX] 10.6 54.49; 55.68 1.19 -11.8 0.01 14.08
rRNA 1Q96 5!B:25!B G:C WC [cWW][XIX] 10.62 54.06; 55.51 1.45 -9.96 0.03 12.77
rRNA 1Q96 6!B:24!B C:G WC [cWW][XIX] 10.65 56.04; 53.73 2.31 -6.89 0.25 14.06
rRNA 1Q96 8!B:23!B C:C pS [cSH][-] 8.34 133.2; 20.31 112.89 -10.69 1.33 10.3
rRNA 1Q96 9!B:21!B A:A rS* [tHH][-] 11.34 11.78; 13.97 2.18 -121.74 1.01 19.2
rRNA 1Q96 10!B:11!B G:U pS* [cHS][-] 6.91 144.64; 50.71 93.94 9.39 0.24 6.32
rRNA 1Q96 11!B:20!B U:A rH_1 [tWH][XXIV] 9.57 28.45; 21.9 6.56 -159.89 0.29 14.06
rRNA 1Q96 12!B:19!B A:G S [tSH][XI] 9.5 8.52; 101.13 92.61 6.61 0.08 6.41
rRNA 1Q96 13!B:18!B U:A WC [cWW][XX] 10.34 57.72; 57.57 0.15 1.12 0.05 8.48
rRNA 1Q96 14!B:17!B G:A S [tSH][XI] 9.3 98.58; 7.8 90.79 -88.65 0.1 14.24
rRNA 1Q96 14!B:16!B G:G S(sb:O2*-N7)_1 [---][-] 7.49 89.39; 34.5 54.9 -176.86 2.43 25.04
rRNA 1Q96 2!C:28!C G:C WC [cWW][XIX] 10.6 53.49; 56.71 3.22 -8.27 0.09 11.2
rRNA 1Q96 3!C:27!C G:C WC [cWW][XIX] 10.64 53.28; 55.35 2.08 -12.24 0.41 16.96
rRNA 1Q96 4!C:26!C U:A WC [cWW][XX] 10.46 56.93; 56.43 0.49 -10.77 0.04 11.83
rRNA 1Q96 5!C:25!C G:C WC [cWW][XIX] 10.65 54.3; 54.77 0.47 -7.22 0.07 10.49
rRNA 1Q96 6!C:24!C C:G WC [cWW][XIX] 10.62 57.1; 53.96 3.14 -9.25 0.24 13.96
rRNA 1Q96 7!C:23!C U:C sWC [---][-] 10.66 81.76; 17.6 64.16 19.3 0.66 23.71
rRNA 1Q96 10!C:11!C G:U pS* [cHS][-] 6.74 140.34; 52.8 87.54 11.36 0.53 12.34
rRNA 1Q96 11!C:20!C U:A rH_1 [tWH][XXIV] 9.33 32.57; 21.49 11.08 -167.23 0.29 13.97
rRNA 1Q96 12!C:19!C A:G S [tSH][XI] 9.32 7.64; 99.11 91.47 -8.58 0.31 12.5
rRNA 1Q96 13!C:18!C U:A WC [cWW][XX] 10.33 56.24; 58.82 2.58 -9.8 0.28 16.56
rRNA 1Q96 14!C:17!C G:A S [tSH][XI] 10.47 79.57; 22.61 56.96 -147.12 0.21 16.06