Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 1QA6 BPC Identified: 64 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
rRNA 1QA6 101!C:158!C G:U Wb [cWW][XXVIII] 10.3 39.28; 66.78 27.5 -8.62 0.64 27.95
rRNA 1QA6 102!C:157!C C:G WC [cWW][XIX] 10.34 56.48; 54.6 1.88 -14.22 0.25 14.96
rRNA 1QA6 103!C:156!C C:G WC [cWW][XIX] 10.33 56.34; 50.93 5.41 -1.75 0.21 11.22
rRNA 1QA6 104!C:155!C A:U WC [cWW][XX] 10.61 56.58; 58.38 1.8 0.49 0.1 5.39
rRNA 1QA6 105!C:154!C G:C WC [cWW][XIX] 10.51 54.75; 55.47 0.71 2.61 0.06 19.67
rRNA 1QA6 105!C:135!C G:A rS [tSS][-] 8.02 86.63; 63.34 23.29 159.52 0.14 21.02
rRNA 1QA6 106!C:153!C G:A S [tSH][XI] 9.31 97.01; 8.58 88.43 -2.95 0.77 18.58
rRNA 1QA6 107!C:131!C A:U WC [cWW][XX] 10.49 53.83; 51.24 2.59 -25.99 0.58 37.93
rRNA 1QA6 108!C:130!C U:A WC [cWW][XX] 10.33 53.72; 54.27 0.55 -6.33 0.28 16.4
rRNA 1QA6 109!C:129!C G:C WC [cWW][XIX] 10.81 52.29; 52.4 0.11 0.84 0.36 11.76
rRNA 1QA6 110!C:138!C U:A H_1 [cWH][XXIII] 8.42 60.05; 49.3 10.75 -3.1 0.22 10.36
rRNA 1QA6 112!C:126!C G:C WC [cWW][XIX] 10.66 46.78; 52.36 5.58 -2.97 0.38 19.17
rRNA 1QA6 113!C:125!C G:C WC [cWW][XIX] 10.47 49.63; 59.69 10.06 -15.94 0.02 17.45
rRNA 1QA6 114!C:124!C C:G WC [cWW][XIX] 10.65 58.04; 55.34 2.71 -13.4 0.29 18.78
rRNA 1QA6 115!C:123!C U:A sWC [---][-] 10.89 84.95; 22.51 62.43 -1.96 0.41 20.17
rRNA 1QA6 116!C:118!C U:G S(sb:O2*-N7)_1 [---][-] 7.1 81.8; 39.37 42.43 -179.49 2.47 15.02
rRNA 1QA6 121!C:150!C G:C srWC* [---][-] 14.13 12.38; 3.41 8.97 3.63 0.38 3.78
rRNA 1QA6 121!C:141!C G:G H_1 [cWH][VI] 11.81 56.61; 24.93 31.68 -7.19 0.1 9.86
rRNA 1QA6 122!C:149!C C:G rH_2 [---][-] 13.82 18.63; 8.09 10.54 37.92 0.17 5.11
rRNA 1QA6 122!C:142!C C:C H_1 [---][-] 9.88 67.38; 33.37 34.01 0.64 0.19 8.28
rRNA 1QA6 127!C:138!C A:A fS(sb:O2*-N1)_1 [---][-] 9.08 49.53; 79.07 29.54 -164.62 1.65 29.35
rRNA 1QA6 132!C:136!C U:A rWC [tWW][XXI] 11.01 35.37; 35.2 0.17 142.35 0.25 16.75
rRNA 1QA6 133!C:135!C U:A S(sb:O2*-N7) [---][-] 6.53 86.71; 38.31 48.4 -165.59 0.04 25.68
rRNA 1QA6 134!C:155!C A:U rpS(sb:O2*-N3) [cSS][-] 5.39 87.11; 156.53 69.42 -61.72 1.1 41.98
rRNA 1QA6 135!C:154!C A:C rpS(bs:O2-O2*) [cSS][-] 5.68 147.47; 104.11 43.36 -59.33 1.75 5.81
rRNA 1QA6 136!C:153!C A:A pfS(sb:O2*-N1) [---][-] 8.62 161.43; 38.56 122.87 44.28 0.39 19.49
rRNA 1QA6 137!C:152!C G:C Wb [---][-] 10.69 42.59; 55.63 13.04 -9.84 0.21 5.4
rRNA 1QA6 139!C:140!C A:A pS [cSH][-] 6.48 142.65; 36.63 106.03 -2.66 0.34 16.99
rRNA 1QA6 140!C:151!C A:U WC [cWW][XX] 10.02 55.38; 59.63 4.25 -3.26 0.73 17.74
rRNA 1QA6 141!C:150!C G:C WC [cWW][XIX] 10.39 54.91; 57.99 3.09 5.93 0.11 10.21
rRNA 1QA6 142!C:149!C C:G WC [cWW][XIX] 10.44 52.32; 52.56 0.24 6.52 0.48 3.66
rRNA 1QA6 143!C:148!C G:A S [tSH][XI] 9.4 91.79; 12.87 78.92 23.39 0.26 9.64
rRNA 1QA6 101!D:158!D G:U Wb [cWW][XXVIII] 10.31 39.28; 66.78 27.51 -8.67 0.64 27.92
rRNA 1QA6 102!D:157!D C:G WC [cWW][XIX] 10.34 56.48; 54.62 1.86 -14.19 0.25 14.98
rRNA 1QA6 103!D:156!D C:G WC [cWW][XIX] 10.33 56.34; 50.93 5.4 -1.71 0.21 11.21
rRNA 1QA6 104!D:155!D A:U WC [cWW][XX] 10.61 56.58; 58.36 1.79 0.56 0.1 5.38
rRNA 1QA6 105!D:154!D G:C WC [cWW][XIX] 10.51 54.75; 55.46 0.71 2.63 0.06 19.66
rRNA 1QA6 105!D:135!D G:A rS [tSS][-] 8.02 86.63; 63.31 23.31 159.53 0.14 21.02
rRNA 1QA6 106!D:153!D G:A S [tSH][XI] 9.31 97.0; 8.58 88.42 -2.94 0.77 18.58
rRNA 1QA6 107!D:131!D A:U WC [cWW][XX] 10.49 53.84; 51.24 2.6 -26.0 0.58 37.94
rRNA 1QA6 108!D:130!D U:A WC [cWW][XX] 10.33 53.71; 54.25 0.54 -6.35 0.28 16.4
rRNA 1QA6 109!D:129!D G:C WC [cWW][XIX] 10.81 52.3; 52.39 0.09 0.8 0.36 11.77
rRNA 1QA6 110!D:138!D U:A H_1 [cWH][XXIII] 8.42 60.07; 49.32 10.75 -3.09 0.22 10.35
rRNA 1QA6 112!D:126!D G:C WC [cWW][XIX] 10.66 46.76; 52.33 5.57 -2.97 0.38 19.17
rRNA 1QA6 113!D:125!D G:C WC [cWW][XIX] 10.47 49.62; 59.69 10.07 -15.96 0.02 17.44
rRNA 1QA6 114!D:124!D C:G WC [cWW][XIX] 10.65 58.04; 55.34 2.7 -13.41 0.29 18.79
rRNA 1QA6 115!D:123!D U:A sWC [---][-] 10.89 84.93; 22.53 62.4 -1.96 0.41 20.16
rRNA 1QA6 116!D:118!D U:G S(sb:O2*-N7)_1 [---][-] 7.1 81.83; 39.4 42.42 -179.46 2.47 15.0
rRNA 1QA6 121!D:150!D G:C srWC* [---][-] 14.13 12.39; 3.4 8.99 3.53 0.38 3.79
rRNA 1QA6 121!D:141!D G:G H_1 [cWH][VI] 11.81 56.64; 24.94 31.7 -7.21 0.1 9.87
rRNA 1QA6 122!D:149!D C:G rH_2 [---][-] 13.82 18.62; 8.11 10.52 38.04 0.16 5.11
rRNA 1QA6 122!D:142!D C:C H_1 [---][-] 9.88 67.37; 33.4 33.97 0.63 0.19 8.3
rRNA 1QA6 127!D:138!D A:A fS(sb:O2*-N1)_1 [---][-] 9.08 49.52; 79.05 29.52 -164.62 1.65 29.38
rRNA 1QA6 132!D:136!D U:A rWC [tWW][XXI] 11.01 35.37; 35.21 0.16 142.33 0.25 16.74
rRNA 1QA6 133!D:135!D U:A S(sb:O2*-N7) [---][-] 6.53 86.71; 38.34 48.37 -165.59 0.04 25.68
rRNA 1QA6 134!D:155!D A:U rpS(sb:O2*-N3) [cSS][-] 5.39 87.11; 156.55 69.44 -61.57 1.09 41.98
rRNA 1QA6 135!D:154!D A:C rpS(bs:O2-O2*) [cSS][-] 5.68 147.46; 104.11 43.35 -59.23 1.75 5.82
rRNA 1QA6 136!D:153!D A:A pfS(sb:O2*-N1) [---][-] 8.62 161.43; 38.56 122.87 44.27 0.39 19.49
rRNA 1QA6 137!D:152!D G:C Wb [---][-] 10.69 42.55; 55.62 13.07 -9.83 0.21 5.41
rRNA 1QA6 139!D:140!D A:A pS [cSH][-] 6.48 142.66; 36.63 106.04 -2.65 0.34 16.99
rRNA 1QA6 140!D:151!D A:U WC [cWW][XX] 10.02 55.37; 59.6 4.23 -3.23 0.74 17.75
rRNA 1QA6 141!D:150!D G:C WC [cWW][XIX] 10.39 54.89; 57.98 3.09 5.94 0.11 10.23
rRNA 1QA6 142!D:149!D C:G WC [cWW][XIX] 10.44 52.29; 52.57 0.28 6.57 0.48 3.7
rRNA 1QA6 143!D:148!D G:A S [tSH][XI] 9.4 91.83; 12.89 78.94 23.26 0.26 9.64