Identified Basepairs and Their Conformations and Conformational Parameters
RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 1QC0
BPC Identified: 28
Ambiguities: 0
PCC_RNA |
1QC0 |
11!A:28!B |
U:A |
WC [cWW][XX] |
10.54 |
59.76; 51.09 |
8.67 |
-9.83 |
0.0 |
15.24 |
PCC_RNA |
1QC0 |
12!A:27!B |
A:U |
WC [cWW][XX] |
10.3 |
59.78; 57.61 |
2.18 |
-12.98 |
0.13 |
16.45 |
PCC_RNA |
1QC0 |
13!A:26!B |
G:C |
WC [cWW][XIX] |
10.49 |
50.66; 59.96 |
9.3 |
-10.48 |
0.06 |
14.86 |
PCC_RNA |
1QC0 |
14!A:25!B |
C:G |
WC [cWW][XIX] |
10.71 |
54.56; 52.41 |
2.14 |
-8.97 |
0.01 |
12.73 |
PCC_RNA |
1QC0 |
15!A:24!B |
G:C |
WC [cWW][XIX] |
10.63 |
57.75; 53.15 |
4.6 |
-6.17 |
0.08 |
10.78 |
PCC_RNA |
1QC0 |
16!A:23!B |
G:C |
WC [cWW][XIX] |
10.61 |
56.15; 55.97 |
0.18 |
-9.69 |
0.24 |
14.44 |
PCC_RNA |
1QC0 |
17!A:22!B |
U:A |
WC [cWW][XX] |
10.44 |
56.71; 56.43 |
0.29 |
-11.71 |
0.03 |
14.26 |
PCC_RNA |
1QC0 |
18!A:21!B |
G:C |
WC [cWW][XIX] |
10.7 |
53.32; 55.05 |
1.73 |
-6.53 |
0.04 |
12.67 |
PCC_RNA |
1QC0 |
19!A:20!B |
C:G |
WC [cWW][XIX] |
10.63 |
54.83; 52.92 |
1.91 |
-5.52 |
0.16 |
8.64 |
PCC_RNA |
1QC0 |
101!C:138!D |
G:C |
WC [cWW][XIX] |
10.41 |
56.33; 58.27 |
1.94 |
-5.21 |
0.08 |
9.79 |
PCC_RNA |
1QC0 |
102!C:137!D |
C:G |
WC [cWW][XIX] |
10.51 |
57.88; 57.13 |
0.76 |
-6.96 |
0.08 |
9.81 |
PCC_RNA |
1QC0 |
103!C:136!D |
A:U |
WC [cWW][XX] |
10.43 |
57.38; 55.63 |
1.75 |
-8.17 |
0.05 |
12.64 |
PCC_RNA |
1QC0 |
104!C:135!D |
C:G |
WC [cWW][XIX] |
10.46 |
50.89; 55.99 |
5.1 |
-10.17 |
0.04 |
17.13 |
PCC_RNA |
1QC0 |
105!C:134!D |
C:G |
WC [cWW][XIX] |
10.43 |
55.37; 56.59 |
1.23 |
-6.41 |
0.11 |
9.87 |
PCC_RNA |
1QC0 |
106!C:133!D |
G:C |
WC [cWW][XIX] |
10.62 |
52.13; 56.13 |
4.0 |
-8.36 |
0.07 |
11.44 |
PCC_RNA |
1QC0 |
107!C:132!D |
U:A |
WC [cWW][XX] |
10.25 |
60.91; 50.68 |
10.23 |
-12.42 |
0.13 |
18.18 |
PCC_RNA |
1QC0 |
108!C:131!D |
U:A |
WC [cWW][XX] |
10.24 |
57.29; 58.68 |
1.39 |
-6.7 |
0.13 |
7.96 |
PCC_RNA |
1QC0 |
109!C:130!D |
G:C |
WC [cWW][XIX] |
10.56 |
50.77; 58.53 |
7.75 |
-11.94 |
0.25 |
17.25 |
PCC_RNA |
1QC0 |
110!C:129!D |
G:C |
WC [cWW][XIX] |
10.67 |
63.69; 53.5 |
10.2 |
-12.0 |
0.2 |
18.64 |
PCC_RNA |
1QC0 |
111!C:128!D |
U:A |
WC [cWW][XX] |
10.29 |
56.99; 50.41 |
6.58 |
-6.7 |
0.11 |
14.18 |
PCC_RNA |
1QC0 |
112!C:127!D |
A:U |
WC [cWW][XX] |
10.52 |
53.66; 58.42 |
4.77 |
-10.19 |
0.21 |
11.35 |
PCC_RNA |
1QC0 |
113!C:126!D |
G:C |
WC [cWW][XIX] |
10.42 |
53.93; 62.41 |
8.47 |
-11.51 |
0.13 |
14.32 |
PCC_RNA |
1QC0 |
114!C:125!D |
C:G |
WC [cWW][XIX] |
10.58 |
53.07; 55.04 |
1.97 |
-10.65 |
0.13 |
18.86 |
PCC_RNA |
1QC0 |
115!C:124!D |
G:C |
WC [cWW][XIX] |
10.68 |
55.81; 56.21 |
0.41 |
-6.11 |
0.12 |
10.04 |
PCC_RNA |
1QC0 |
116!C:123!D |
G:C |
WC [cWW][XIX] |
10.76 |
54.64; 51.9 |
2.75 |
-9.35 |
0.21 |
15.12 |
PCC_RNA |
1QC0 |
117!C:122!D |
U:A |
WC [cWW][XX] |
10.35 |
57.17; 55.05 |
2.13 |
-9.66 |
0.1 |
13.04 |
PCC_RNA |
1QC0 |
118!C:121!D |
G:C |
WC [cWW][XIX] |
10.32 |
56.77; 56.32 |
0.45 |
-10.18 |
0.38 |
15.76 |
PCC_RNA |
1QC0 |
119!C:120!D |
C:G |
WC [cWW][XIX] |
10.69 |
55.21; 57.47 |
2.26 |
-6.71 |
0.28 |
5.96 |