Identified Basepairs and Their Conformations and Conformational Parameters
RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 1QCU
BPC Identified: 22
Ambiguities: 0
PCC_RNA |
1QCU |
1!A:22!B |
G:C |
WC [cWW][XIX] |
10.66 |
55.78; 56.62 |
0.84 |
-9.36 |
0.38 |
10.5 |
PCC_RNA |
1QCU |
2!A:21!B |
G:C |
WC [cWW][XIX] |
10.6 |
53.91; 55.7 |
1.79 |
-11.02 |
0.58 |
16.67 |
PCC_RNA |
1QCU |
3!A:20!B |
G:C |
WC [cWW][XIX] |
10.59 |
51.81; 59.02 |
7.21 |
-10.94 |
0.37 |
16.09 |
PCC_RNA |
1QCU |
4!A:19!B |
G:C |
WC [cWW][XIX] |
10.58 |
54.0; 57.38 |
3.38 |
-12.66 |
0.31 |
19.36 |
PCC_RNA |
1QCU |
5!A:18!B |
G:C |
WC [cWW][XIX] |
10.65 |
53.3; 56.41 |
3.1 |
-10.74 |
0.08 |
13.42 |
PCC_RNA |
1QCU |
6!A:17!B |
G:C |
WC [cWW][XIX] |
10.67 |
55.16; 56.05 |
0.9 |
-12.71 |
0.16 |
17.35 |
PCC_RNA |
1QCU |
7!A:16!B |
G:C |
WC [cWW][XIX] |
10.64 |
54.38; 56.91 |
2.53 |
-12.18 |
0.21 |
17.7 |
PCC_RNA |
1QCU |
8!A:15!B |
G:C |
WC [cWW][XIX] |
10.59 |
55.9; 59.0 |
3.1 |
-10.89 |
0.31 |
12.28 |
PCC_RNA |
1QCU |
9!A:14!B |
G:C |
WC [cWW][XIX] |
10.6 |
52.65; 57.94 |
5.29 |
-9.88 |
0.26 |
14.02 |
PCC_RNA |
1QCU |
10!A:13!B |
G:C |
WC [cWW][XIX] |
10.62 |
53.5; 56.16 |
2.66 |
-11.92 |
0.05 |
17.08 |
PCC_RNA |
1QCU |
11!A:12!B |
G:C |
WC [cWW][XIX] |
10.63 |
57.13; 54.67 |
2.46 |
-8.77 |
0.09 |
12.64 |
PCC_RNA |
1QCU |
101!C:122!D |
C:G |
WC [cWW][XIX] |
10.66 |
54.24; 55.28 |
1.04 |
-8.99 |
0.13 |
13.31 |
PCC_RNA |
1QCU |
102!C:121!D |
C:G |
WC [cWW][XIX] |
10.6 |
54.91; 52.9 |
2.01 |
-12.27 |
0.25 |
16.82 |
PCC_RNA |
1QCU |
103!C:120!D |
C:G |
WC [cWW][XIX] |
10.59 |
59.07; 52.52 |
6.55 |
-10.35 |
0.02 |
15.51 |
PCC_RNA |
1QCU |
104!C:119!D |
C:G |
WC [cWW][XIX] |
10.58 |
57.59; 54.99 |
2.6 |
-11.1 |
0.03 |
14.16 |
PCC_RNA |
1QCU |
105C:118!D |
C:G |
WC [cWW][XIX] |
10.65 |
56.93; 53.57 |
3.36 |
-12.17 |
0.15 |
16.54 |
PCC_RNA |
1QCU |
106!C:117!D |
C:G |
WC [cWW][XIX] |
10.67 |
53.95; 54.08 |
0.13 |
-11.85 |
0.33 |
15.65 |
PCC_RNA |
1QCU |
107!C:116!D |
C:G |
WC [cWW][XIX] |
10.64 |
55.93; 54.22 |
1.71 |
-10.73 |
0.39 |
13.05 |
PCC_RNA |
1QCU |
108!C:115!D |
C:G |
WC [cWW][XIX] |
10.59 |
55.09; 53.4 |
1.69 |
-13.83 |
0.3 |
21.59 |
PCC_RNA |
1QCU |
109!C:114!D |
C:G |
WC [cWW][XIX] |
10.6 |
58.71; 52.58 |
6.13 |
-10.61 |
0.37 |
15.68 |
PCC_RNA |
1QCU |
110!C:113!D |
C:G |
WC [cWW][XIX] |
10.62 |
55.5; 53.04 |
2.47 |
-10.27 |
0.07 |
13.48 |
PCC_RNA |
1QCU |
111!C:112!D |
C:G |
WC [cWW][XIX] |
10.63 |
55.83; 55.33 |
0.51 |
-9.98 |
0.18 |
10.96 |