Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 1QU2
BPC Identified: 34
Ambiguities: 0
| tRNA |
1QU2 |
1!T:72!T |
G:C |
WC [cWW][XIX] |
10.73 |
54.58; 54.3 |
0.29 |
-4.16 |
0.06 |
11.74 |
| tRNA |
1QU2 |
2!T:71!T |
G:C |
WC [cWW][XIX] |
10.46 |
56.07; 60.29 |
4.22 |
-8.27 |
0.34 |
6.7 |
| tRNA |
1QU2 |
3!T:70!T |
G:C |
WC [cWW][XIX] |
10.66 |
53.29; 56.92 |
3.63 |
-4.35 |
0.09 |
7.6 |
| tRNA |
1QU2 |
4!T:69!T |
C:G |
WC [cWW][XIX] |
10.46 |
59.8; 58.03 |
1.77 |
3.38 |
0.17 |
16.31 |
| tRNA |
1QU2 |
5!T:68!T |
U:G |
Wb [cWW][XXVIII] |
10.4 |
68.9; 43.41 |
25.49 |
-11.64 |
0.35 |
15.25 |
| tRNA |
1QU2 |
6!T:67!T |
U:A |
WC [cWW][XX] |
10.47 |
59.01; 56.91 |
2.09 |
-8.55 |
0.16 |
11.27 |
| tRNA |
1QU2 |
7!T:66!T |
G:C |
WC [cWW][XIX] |
10.59 |
51.71; 53.15 |
1.44 |
-9.83 |
0.11 |
7.53 |
| tRNA |
1QU2 |
8!T:21A |
U:A |
fS(sb:O2*-N1) [tSW][-] |
8.3 |
103.25; 55.19 |
48.06 |
145.89 |
0.58 |
30.44 |
| tRNA |
1QU2 |
8!T:14!T |
U:A |
rH_1 [tWH][XXIV] |
9.93 |
35.08; 17.62 |
17.45 |
156.47 |
0.46 |
13.17 |
| tRNA |
1QU2 |
9!T:23!T |
A:A |
rS* [tHH][-] |
11.51 |
3.34; 9.73 |
6.39 |
109.75 |
0.84 |
18.29 |
| tRNA |
1QU2 |
10!T:25!T |
G:C |
WC [cWW][XIX] |
10.64 |
51.11; 54.54 |
3.42 |
-7.04 |
0.63 |
17.85 |
| tRNA |
1QU2 |
11!T:24!T |
C:G |
WC [cWW][XIX] |
10.64 |
54.95; 54.49 |
0.46 |
-3.65 |
0.64 |
17.19 |
| tRNA |
1QU2 |
12!T:23!T |
U:A |
WC [cWW][XX] |
10.79 |
53.25; 54.87 |
1.62 |
-5.94 |
0.05 |
4.32 |
| tRNA |
1QU2 |
13!T:22!T |
C:G |
WC [cWW][XIX] |
10.64 |
57.79; 52.68 |
5.11 |
-1.67 |
0.25 |
8.13 |
| tRNA |
1QU2 |
14!T:21A |
A:A |
pfS [cSW][-] |
10.35 |
31.58; 112.43 |
80.86 |
-16.93 |
0.35 |
20.22 |
| tRNA |
1QU2 |
15!T:48!T |
G:C |
rWb [tWW][XXII] |
10.26 |
36.15; 60.77 |
24.61 |
166.13 |
0.04 |
5.59 |
| tRNA |
1QU2 |
18!T:55!T |
G:U |
fS_1 [tSW][-] |
9.29 |
25.68; 101.54 |
75.86 |
-167.38 |
1.09 |
28.88 |
| tRNA |
1QU2 |
19!T:56!T |
G:C |
WC [cWW][XIX] |
10.34 |
57.7; 52.88 |
4.82 |
-9.02 |
0.79 |
21.89 |
| tRNA |
1QU2 |
22!T:46!T |
G:G |
rH_1 [tWH][VII] |
11.14 |
25.87; 36.12 |
10.25 |
165.18 |
0.59 |
11.94 |
| tRNA |
1QU2 |
26!T:44!T |
G:A |
WC [cWW][VIII] |
12.56 |
41.91; 48.5 |
6.59 |
-22.12 |
0.64 |
35.73 |
| tRNA |
1QU2 |
27!T:43!T |
C:G |
WC [cWW][XIX] |
10.63 |
52.39; 56.95 |
4.56 |
-18.44 |
0.6 |
27.22 |
| tRNA |
1QU2 |
28!T:42!T |
A:U |
WC [cWW][XX] |
10.49 |
53.01; 54.88 |
1.86 |
-16.65 |
0.21 |
19.01 |
| tRNA |
1QU2 |
29!T:41!T |
C:G |
WC [cWW][XIX] |
10.62 |
59.46; 53.6 |
5.86 |
-4.92 |
0.44 |
17.49 |
| tRNA |
1QU2 |
30!T:40!T |
C:G |
WC [cWW][XIX] |
10.74 |
59.89; 51.0 |
8.89 |
-2.49 |
0.46 |
14.88 |
| tRNA |
1QU2 |
31!T:39!T |
C:G |
WC [cWW][XIX] |
10.64 |
55.55; 53.1 |
2.45 |
3.03 |
0.11 |
5.3 |
| tRNA |
1QU2 |
32!T:38!T |
C:A |
sWb [---][-] |
11.21 |
71.45; 26.82 |
44.63 |
21.18 |
0.26 |
12.52 |
| tRNA |
1QU2 |
33!T:36!T |
U:U |
pfS_2 [---][-] |
7.12 |
106.62; 25.92 |
80.7 |
-141.97 |
0.18 |
19.95 |
| tRNA |
1QU2 |
49!T:65!T |
G:U |
Wb [cWW][XXVIII] |
10.36 |
41.89; 71.39 |
29.5 |
-6.43 |
0.13 |
10.22 |
| tRNA |
1QU2 |
50!T:64!T |
G:C |
Wb [---][-] |
10.68 |
51.33; 64.32 |
12.99 |
-7.53 |
0.48 |
13.64 |
| tRNA |
1QU2 |
51!T:63!T |
U:A |
WC [cWW][XX] |
10.45 |
52.11; 58.71 |
6.6 |
-5.24 |
0.01 |
7.24 |
| tRNA |
1QU2 |
52!T:62!T |
G:C |
WC [cWW][XIX] |
10.6 |
54.15; 54.28 |
0.12 |
-6.29 |
0.02 |
9.28 |
| tRNA |
1QU2 |
53!T:61!T |
G:C |
WC [cWW][XIX] |
10.61 |
51.28; 55.74 |
4.47 |
-6.45 |
0.29 |
8.66 |
| tRNA |
1QU2 |
54!T:58!T |
U:A |
rH_1 [tWH][XXIV] |
10.25 |
31.25; 8.59 |
22.66 |
-175.84 |
0.01 |
10.93 |
| tRNA |
1QU2 |
55!T:57!T |
U:A |
S(sb:O2*-N7) [---][-] |
6.62 |
80.29; 39.7 |
40.58 |
-170.04 |
1.48 |
32.87 |