Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 1QU3 BPC Identified: 32 Ambiguities: 1
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
tRNA 1QU3 1!T:72!T G:C WC [cWW][XIX] 11.22 48.11; 44.55 3.56 9.98 0.39 7.7
tRNA 1QU3 2!T:71!T G:C WC [cWW][XIX] 10.07 59.41; 60.63 1.22 -9.41 0.16 28.85
tRNA 1QU3 3!T:70!T G:C WC [cWW][XIX] 10.53 56.75; 58.88 2.13 -0.63 0.06 5.85
tRNA 1QU3 4!T:69!T C:G WC [cWW][XIX] 10.46 59.79; 57.83 1.96 3.57 0.12 15.38
tRNA 1QU3 5!T:68!T U:G Wb [cWW][XXVIII] 9.94 70.56; 43.05 27.5 -10.1 0.13 22.15
tRNA 1QU3 6!T:67!T U:A WC [cWW][XX] 10.42 63.94; 54.05 9.9 -4.37 0.29 8.67
tRNA 1QU3 7!T:66!T G:C WC [cWW][XIX] 10.73 60.11; 48.86 11.25 -9.32 0.47 17.48
tRNA 1QU3 8!T:48!T U:C rpS(ss:O2*-O2*)_1 [---][-] 4.64 156.34; 116.67 39.66 30.91 1.71 14.31
tRNA 1QU3 8!T:21!T U:A fS(sb:O2*-N1) [tSW][-] 8.97 100.2; 53.52 46.68 147.39 0.54 23.58
tRNA 1QU3 8!T:14!T U:A rH_1 [tWH][XXIV] 9.76 31.61; 21.33 10.28 153.99 0.14 10.04
tRNA 1QU3 9!T:23!T A:A rS* [tHH][-] 11.13 11.77; 8.74 3.03 78.72 0.6 12.71
tRNA 1QU3 10!T:25!T G:C WC [cWW][XIX] 10.51 50.08; 55.28 5.2 -4.59 0.19 8.28
tRNA 1QU3 11!T:24!T C:G WC [cWW][XIX] 10.33 58.86; 59.81 0.96 -2.31 0.58 21.04
tRNA 1QU3 12!T:23!T U:A WC [cWW][XX] 10.49 46.94; 58.72 11.78 -3.32 0.02 9.82
tRNA 1QU3 13!T:22!T C:G WC [cWW][XIX] 10.96 53.51; 53.42 0.09 -8.81 0.29 15.76
tRNA 1QU3 15!T:48!T G:C rWb [tWW][XXII] 10.78 35.99; 66.01 30.03 164.38 0.14 6.2
tRNA 1QU3 18!T:55!T G:U fS_1 [tSW][-] 9.07 23.48; 103.16 79.67 -150.13 0.66 23.95
tRNA 1QU3 19!T:56!T G:C WC [cWW][XIX] 10.46 62.2; 54.85 7.35 -12.25 0.18 22.7
tRNA 1QU3 26!T:44!T G:A WC [cWW][VIII] 12.62 41.77; 47.44 5.67 -20.97 0.8 32.44
tRNA 1QU3 27!T:43!T C:G WC [cWW][XIX] 10.52 50.82; 54.71 3.89 -17.67 0.66 30.87
tRNA 1QU3 28!T:42!T A:U WC [cWW][XX] 10.46 55.0; 59.96 4.96 -14.16 0.27 16.48
tRNA 1QU3 29!T:41!T C:G WC [cWW][XIX] 10.59 63.06; 52.03 11.03 -2.06 0.88 22.71
tRNA 1QU3 30!T:40!T C:G WC [cWW][XIX] 10.78 60.03; 48.54 11.48 1.8 0.02 14.76
tRNA 1QU3 31!T:39!T C:G WC [cWW][XIX] 10.33 62.31; 54.65 7.66 6.26 0.15 6.6
tRNA 1QU3 32!T:38!T C:A sWb [---][-] 11.21 70.45; 28.79 41.66 15.02 0.9 22.27
tRNA 1QU3 33!T:36T* U:U fS_1 [tSW][-]; pfS_1 [cSW][-]; pfS_2 [---][-] 6.62 116.44; 26.48 89.96 -152.34 0.31 15.26
tRNA 1QU3 49!T:65!T G:U Wb [cWW][XXVIII] 10.28 46.83; 65.93 19.1 0.17 0.09 5.37
tRNA 1QU3 50!T:64!T G:C WC [cWW][XIX] 10.47 52.55; 65.47 12.92 -11.75 0.22 13.01
tRNA 1QU3 51!T:63!T U:A WC [cWW][XX] 10.33 57.54; 56.48 1.06 -1.19 0.26 15.99
tRNA 1QU3 52!T:62!T G:C WC [cWW][XIX] 10.55 53.8; 51.84 1.96 -5.74 0.33 11.45
tRNA 1QU3 53!T:61!T G:C WC [cWW][XIX] 10.66 50.65; 53.82 3.17 -3.67 0.46 0.46
tRNA 1QU3 54!T:58!T U:A rH_1 [tWH][XXIV] 9.97 39.11; 8.88 30.23 179.08 0.2 12.47