Identified Basepairs and Their Conformations and Conformational Parameters
RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 1R3O
BPC Identified: 16
Ambiguities: 0
dsRNA |
1R3O |
79!A:97!B |
C:G |
WC [cWW][XIX] |
10.66 |
52.63; 51.72 |
0.91 |
6.53 |
0.4 |
17.01 |
dsRNA |
1R3O |
80!A:96!B |
U:G |
Wb [cWW][XXVIII] |
10.54 |
63.61; 47.74 |
15.87 |
6.33 |
0.51 |
18.64 |
dsRNA |
1R3O |
81!A:95!B |
G:U |
Wb [cWW][XXVIII] |
10.55 |
45.77; 63.95 |
18.17 |
4.94 |
0.13 |
9.63 |
dsRNA |
1R3O |
82!A:94!B |
G:C |
WC [cWW][XIX] |
10.7 |
56.11; 55.25 |
0.86 |
3.09 |
0.14 |
5.66 |
dsRNA |
1R3O |
83!A:93!B |
G:C |
WC [cWW][XIX] |
10.74 |
54.02; 57.32 |
3.3 |
3.68 |
0.06 |
10.47 |
dsRNA |
1R3O |
84!A:92!B |
C:G |
WC [cWW][XIX] |
10.75 |
57.04; 50.53 |
6.51 |
1.14 |
0.04 |
6.01 |
dsRNA |
1R3O |
85!A:91!B |
G:C |
WC [cWW][XIX] |
10.5 |
49.91; 61.95 |
12.04 |
8.05 |
0.44 |
12.67 |
dsRNA |
1R3O |
86!A:90!B |
G:C |
WC [cWW][XIX] |
10.68 |
55.77; 53.09 |
2.68 |
11.8 |
0.34 |
16.31 |
dsRNA |
1R3O |
79!C:97!D |
C:G |
WC [cWW][XIX] |
10.74 |
54.68; 53.27 |
1.41 |
-1.18 |
0.1 |
4.71 |
dsRNA |
1R3O |
80!C:96!D |
U:G |
Wb [cWW][XXVIII] |
10.5 |
67.63; 43.28 |
24.35 |
0.91 |
0.22 |
13.05 |
dsRNA |
1R3O |
81!C:95!D |
G:U |
Wb [cWW][XXVIII] |
10.52 |
43.21; 65.69 |
22.48 |
-0.27 |
0.3 |
6.31 |
dsRNA |
1R3O |
82!C:94!D |
G:C |
WC [cWW][XIX] |
10.79 |
53.08; 54.3 |
1.22 |
7.2 |
0.06 |
10.42 |
dsRNA |
1R3O |
83!C:93!D |
G:C |
WC [cWW][XIX] |
10.74 |
56.33; 53.12 |
3.21 |
6.37 |
0.27 |
14.69 |
dsRNA |
1R3O |
84!C:92!D |
C:G |
WC [cWW][XIX] |
10.58 |
54.77; 52.75 |
2.02 |
5.05 |
0.1 |
7.91 |
dsRNA |
1R3O |
85!C:91!D |
G:C |
WC [cWW][XIX] |
10.83 |
51.38; 56.54 |
5.16 |
9.52 |
0.21 |
15.55 |
dsRNA |
1R3O |
86!C:90!D |
G:C |
WC [cWW][XIX] |
10.82 |
53.55; 52.24 |
1.31 |
8.53 |
0.22 |
15.55 |